RNA–Protein interactions for RNA: ENST00000489337.5

SMTN-218, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-218ENST00000489337 TMEM87BQ96K49 555 aa13.1□□□□□ -0.31
SMTN-218ENST00000489337 KRT23Q9C075 422 aa13.1□□□□□ -0.31
SMTN-218ENST00000489337 CABP5Q9NP86 173 aa13.1□□□□□ -0.31
SMTN-218ENST00000489337 ATP6V0A2Q9Y487 856 aa13.1□□□□□ -0.31
SMTN-218ENST00000489337 ZMYM6O95789 1325 aa13.1□□□□□ -0.31
SMTN-218ENST00000489337 AGPSO00116 658 aa13.1□□□□□ -0.31
SMTN-218ENST00000489337 PES1O00541 588 aaKnown RBP13.1□□□□□ -0.31
SMTN-218ENST00000489337 EIF3HO15372 352 aaKnown RBP eCLIP13.1□□□□□ -0.31
SMTN-218ENST00000489337 IBSPP21815 317 aaPredicted RBP13.1□□□□□ -0.31
SMTN-218ENST00000489337 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.1□□□□□ -0.31
SMTN-218ENST00000489337 ZC3H4Q9UPT8 1303 aaKnown RBP13.1□□□□□ -0.31
SMTN-218ENST00000489337 BAZ2AQ9UIF9 1905 aaKnown RBP13.09□□□□□ -0.31
SMTN-218ENST00000489337 MYBL2P10244 700 aa13.09□□□□□ -0.31
SMTN-218ENST00000489337 KRT9P35527 623 aa13.09□□□□□ -0.31
SMTN-218ENST00000489337 SARSP49591 514 aaKnown RBP13.09□□□□□ -0.31
SMTN-218ENST00000489337 CDAN1Q8IWY9 1227 aa13.09□□□□□ -0.31
SMTN-218ENST00000489337 RNF41Q9H4P4 317 aaPredicted RBP13.09□□□□□ -0.31
SMTN-218ENST00000489337 DAGLAQ9Y4D2 1042 aa13.09□□□□□ -0.31
SMTN-218ENST00000489337 APTXQ7Z2E3 356 aaKnown RBP13.09□□□□□ -0.31
SMTN-218ENST00000489337 TRAPPC11Q7Z392 1133 aa13.09□□□□□ -0.31
SMTN-218ENST00000489337 IGDCC4Q8TDY8 1250 aa13.09□□□□□ -0.31
SMTN-218ENST00000489337 ZSCAN10Q96SZ4 725 aaPredicted RBP13.09□□□□□ -0.31
SMTN-218ENST00000489337 RUFY1Q96T51 708 aa13.09□□□□□ -0.31
SMTN-218ENST00000489337 DDX4Q9NQI0 724 aaKnown RBP13.09□□□□□ -0.31
SMTN-218ENST00000489337 ABHD10Q9NUJ1 306 aa13.09□□□□□ -0.31
SMTN-218ENST00000489337 NUP188Q5SRE5 1749 aa13.09□□□□□ -0.31
SMTN-218ENST00000489337 NT5DC1Q5TFE4 455 aa13.09□□□□□ -0.31
SMTN-218ENST00000489337 KANK3Q6NY19 840 aa13.09□□□□□ -0.31
SMTN-218ENST00000489337 SND1Q7KZF4 910 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMTN-218ENST00000489337 SMYD4Q8IYR2 804 aaPredicted RBP13.09□□□□□ -0.31
SMTN-218ENST00000489337 CNPY4Q8N129 248 aa13.09□□□□□ -0.31
SMTN-218ENST00000489337 VPS16Q9H269 839 aa13.09□□□□□ -0.31
SMTN-218ENST00000489337 COBLO75128 1261 aa13.08□□□□□ -0.32
SMTN-218ENST00000489337 ATP1A1P05023 1023 aaKnown RBP13.08□□□□□ -0.32
SMTN-218ENST00000489337 CCDC70Q6NSX1 233 aa13.08□□□□□ -0.32
SMTN-218ENST00000489337 B4GALNT4Q76KP1 1039 aa13.08□□□□□ -0.32
SMTN-218ENST00000489337 FANCBQ8NB91 859 aa13.08□□□□□ -0.32
SMTN-218ENST00000489337 CAMKK2Q96RR4 588 aa13.08□□□□□ -0.32
SMTN-218ENST00000489337 EYA3Q99504 573 aa13.08□□□□□ -0.32
SMTN-218ENST00000489337 LDHCP07864 332 aa13.08□□□□□ -0.32
SMTN-218ENST00000489337 PBX1P40424 430 aa13.08□□□□□ -0.32
SMTN-218ENST00000489337 CKAP4Q07065 602 aaKnown RBP13.08□□□□□ -0.32
SMTN-218ENST00000489337 CCDC122Q5T0U0 273 aa13.08□□□□□ -0.32
SMTN-218ENST00000489337 CCNI2Q6ZMN8 369 aaPredicted RBP13.08□□□□□ -0.32
SMTN-218ENST00000489337 PRPF38AQ8NAV1 312 aaKnown RBP13.08□□□□□ -0.32
SMTN-218ENST00000489337 CENPHQ9H3R5 247 aa13.08□□□□□ -0.32
SMTN-218ENST00000489337 EPN1Q9Y6I3 576 aaPredicted RBP13.08□□□□□ -0.32
SMTN-218ENST00000489337 MYH13Q9UKX3 1938 aa13.07□□□□□ -0.32
SMTN-218ENST00000489337 ZEB2O60315 1214 aa13.07□□□□□ -0.32
SMTN-218ENST00000489337 GNAT2P19087 354 aa13.07□□□□□ -0.32
SMTN-218ENST00000489337 DIS3L2Q8IYB7 885 aaKnown RBP13.07□□□□□ -0.32
SMTN-218ENST00000489337 CHP1Q99653 195 aa13.07□□□□□ -0.32
SMTN-218ENST00000489337 TARSL2A2RTX5 802 aaKnown RBP13.07□□□□□ -0.32
SMTN-218ENST00000489337 CASP1P29466 404 aa13.07□□□□□ -0.32
SMTN-218ENST00000489337 ZNF174Q15697 407 aa13.07□□□□□ -0.32
SMTN-218ENST00000489337 TSR1Q2NL82 804 aaKnown RBP13.07□□□□□ -0.32
SMTN-218ENST00000489337 USP49Q70CQ1 688 aa13.07□□□□□ -0.32
SMTN-218ENST00000489337 KCTD1Q719H9 257 aa13.07□□□□□ -0.32
SMTN-218ENST00000489337 ELOA2Q8IYF1 753 aaPredicted RBP13.07□□□□□ -0.32
SMTN-218ENST00000489337 TTLL6Q8N841 843 aa13.07□□□□□ -0.32
SMTN-218ENST00000489337 CNNM2Q9H8M5 875 aa13.07□□□□□ -0.32
SMTN-218ENST00000489337 NLRP5P59047 1200 aa13.07□□□□□ -0.32
SMTN-218ENST00000489337 RASSF7Q02833 373 aa13.07□□□□□ -0.32
SMTN-218ENST00000489337 PDCLQ13371 301 aa13.07□□□□□ -0.32
SMTN-218ENST00000489337 PNMA1Q8ND90 353 aa13.07□□□□□ -0.32
SMTN-218ENST00000489337 JAKMIP2Q96AA8 810 aa13.07□□□□□ -0.32
SMTN-218ENST00000489337 RPGRIP1Q96KN7 1286 aa13.07□□□□□ -0.32
SMTN-218ENST00000489337 TFR2Q9UP52 801 aa13.07□□□□□ -0.32
SMTN-218ENST00000489337 RNF225M0QZC1 329 aaPredicted RBP13.06□□□□□ -0.32
SMTN-218ENST00000489337 NDUFA10O95299 355 aa13.06□□□□□ -0.32
SMTN-218ENST00000489337 CD44P16070 742 aaKnown RBP13.06□□□□□ -0.32
SMTN-218ENST00000489337 PTPREP23469 700 aa13.06□□□□□ -0.32
SMTN-218ENST00000489337 RNF187Q5TA31 235 aaPredicted RBP13.06□□□□□ -0.32
SMTN-218ENST00000489337 NOSTRINQ8IVI9 506 aa13.06□□□□□ -0.32
SMTN-218ENST00000489337 CD248Q9HCU0 757 aa13.06□□□□□ -0.32
SMTN-218ENST00000489337 JADE2Q9NQC1 790 aa13.06□□□□□ -0.32
SMTN-218ENST00000489337 BRWD3Q6RI45 1802 aa13.06□□□□□ -0.32
SMTN-218ENST00000489337 KIAA1328Q86T90 577 aa13.06□□□□□ -0.32
SMTN-218ENST00000489337 RPAINQ86UA6 219 aa13.06□□□□□ -0.32
SMTN-218ENST00000489337 SP8Q8IXZ3 490 aa13.06□□□□□ -0.32
SMTN-218ENST00000489337 TEKT1Q969V4 418 aa13.06□□□□□ -0.32
SMTN-218ENST00000489337 HAUS4Q9H6D7 363 aa13.06□□□□□ -0.32
SMTN-218ENST00000489337 FAM184BQ9ULE4 1060 aa13.06□□□□□ -0.32
SMTN-218ENST00000489337 GRIN2DO15399 1336 aa13.06□□□□□ -0.32
SMTN-218ENST00000489337 OPA1O60313 960 aa13.06□□□□□ -0.32
SMTN-218ENST00000489337 NEDD9Q14511 834 aa13.06□□□□□ -0.32
SMTN-218ENST00000489337 TBC1D10BQ4KMP7 808 aaPredicted RBP13.06□□□□□ -0.32
SMTN-218ENST00000489337 RILPL1Q5EBL4 403 aa13.06□□□□□ -0.32
SMTN-218ENST00000489337 MYH3P11055 1940 aa13.05□□□□□ -0.32
SMTN-218ENST00000489337 GOLGA8KD6RF30 607 aa13.05□□□□□ -0.32
SMTN-218ENST00000489337 POLD1P28340 1107 aa13.05□□□□□ -0.32
SMTN-218ENST00000489337 CDK8P49336 464 aa13.05□□□□□ -0.32
SMTN-218ENST00000489337 ATP1A2P50993 1020 aa13.05□□□□□ -0.32
SMTN-218ENST00000489337 CRY2Q49AN0 593 aa13.05□□□□□ -0.32
SMTN-218ENST00000489337 PRMT6Q96LA8 375 aaPredicted RBP13.05□□□□□ -0.32
SMTN-218ENST00000489337 FBXO2Q9UK22 296 aaPredicted RBP13.05□□□□□ -0.32
SMTN-218ENST00000489337 PSMD14O00487 310 aa13.05□□□□□ -0.32
SMTN-218ENST00000489337 CHUKO15111 745 aa13.05□□□□□ -0.32
SMTN-218ENST00000489337 ZNF185O15231 689 aa13.05□□□□□ -0.32
SMTN-218ENST00000489337 MEFVO15553 781 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms