RNA–Protein interactions for RNA: ENST00000488759.5

LRMDA-205, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 3

Gene LRMDA, Length 337 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-205ENST00000488759 CABYRO75952 493 aa12.51□□□□□ -0.41
LRMDA-205ENST00000488759 CSF2RAP15509 400 aa12.51□□□□□ -0.41
LRMDA-205ENST00000488759 CYP2C18P33260 490 aa12.51□□□□□ -0.41
LRMDA-205ENST00000488759 CCL23P55773 120 aa12.51□□□□□ -0.41
LRMDA-205ENST00000488759 NUCB1Q02818 461 aa12.51□□□□□ -0.41
LRMDA-205ENST00000488759 ZNF543Q08ER8 600 aa12.51□□□□□ -0.41
LRMDA-205ENST00000488759 TRDNQ13061 729 aa12.51□□□□□ -0.41
LRMDA-205ENST00000488759 ITGA7Q13683 1181 aa12.51□□□□□ -0.41
LRMDA-205ENST00000488759 CCDC178Q5BJE1 867 aa12.51□□□□□ -0.41
LRMDA-205ENST00000488759 GPATCH4Q5T3I0 446 aaKnown RBP12.51□□□□□ -0.41
LRMDA-205ENST00000488759 IQSEC1Q6DN90 963 aa12.51□□□□□ -0.41
LRMDA-205ENST00000488759 PSRC1Q6PGN9 363 aaPredicted RBP12.51□□□□□ -0.41
LRMDA-205ENST00000488759 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.51□□□□□ -0.41
LRMDA-205ENST00000488759 PLEKHM2Q8IWE5 1019 aa12.51□□□□□ -0.41
LRMDA-205ENST00000488759 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.51□□□□□ -0.41
LRMDA-205ENST00000488759 PPM1EQ8WY54 764 aa12.51□□□□□ -0.41
LRMDA-205ENST00000488759 CDX2Q99626 313 aaPredicted RBP12.51□□□□□ -0.41
LRMDA-205ENST00000488759 WDR11Q9BZH6 1224 aa12.51□□□□□ -0.41
LRMDA-205ENST00000488759 UBA5Q9GZZ9 404 aa12.51□□□□□ -0.41
LRMDA-205ENST00000488759 CPVLQ9H3G5 476 aa12.51□□□□□ -0.41
LRMDA-205ENST00000488759 VAT1LQ9HCJ6 419 aa12.51□□□□□ -0.41
LRMDA-205ENST00000488759 TANC1Q9C0D5 1861 aa12.51□□□□□ -0.41
LRMDA-205ENST00000488759 SCN5AQ14524 2016 aa12.5□□□□□ -0.41
LRMDA-205ENST00000488759 ERICH2A1L162 156 aa12.5□□□□□ -0.41
LRMDA-205ENST00000488759 PARP1P09874 1014 aaKnown RBP12.5□□□□□ -0.41
LRMDA-205ENST00000488759 DNAJB2P25686 324 aa12.5□□□□□ -0.41
LRMDA-205ENST00000488759 EPHB4P54760 987 aa12.5□□□□□ -0.41
LRMDA-205ENST00000488759 IFIT1BQ5T764 474 aaKnown RBP12.5□□□□□ -0.41
LRMDA-205ENST00000488759 FAM109BQ6ICB4 259 aaPredicted RBP12.5□□□□□ -0.41
LRMDA-205ENST00000488759 MFSD5Q6N075 450 aa12.5□□□□□ -0.41
LRMDA-205ENST00000488759 CHST3Q7LGC8 479 aa12.5□□□□□ -0.41
LRMDA-205ENST00000488759 FAM126BQ8IXS8 530 aa12.5□□□□□ -0.41
LRMDA-205ENST00000488759 TIFAQ96CG3 184 aa12.5□□□□□ -0.41
LRMDA-205ENST00000488759 GAS2L1Q99501 681 aaPredicted RBP12.5□□□□□ -0.41
LRMDA-205ENST00000488759 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.5□□□□□ -0.41
LRMDA-205ENST00000488759 KRT23Q9C075 422 aa12.5□□□□□ -0.41
LRMDA-205ENST00000488759 CNNM2Q9H8M5 875 aa12.5□□□□□ -0.41
LRMDA-205ENST00000488759 POLR3EQ9NVU0 708 aa12.5□□□□□ -0.41
LRMDA-205ENST00000488759 MSRAQ9UJ68 235 aa12.5□□□□□ -0.41
LRMDA-205ENST00000488759 TNKSO95271 1327 aa12.5□□□□□ -0.41
LRMDA-205ENST00000488759 ABCB11O95342 1321 aa12.49□□□□□ -0.41
LRMDA-205ENST00000488759 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.49□□□□□ -0.41
LRMDA-205ENST00000488759 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.49□□□□□ -0.41
LRMDA-205ENST00000488759 IGHDP01880 384 aa12.49□□□□□ -0.41
LRMDA-205ENST00000488759 RPS6P62753 249 aaKnown RBP12.49□□□□□ -0.41
LRMDA-205ENST00000488759 RALYLQ86SE5 291 aaKnown RBP12.49□□□□□ -0.41
LRMDA-205ENST00000488759 SMC5Q8IY18 1101 aa12.49□□□□□ -0.41
LRMDA-205ENST00000488759 TTC14Q96N46 770 aa12.49□□□□□ -0.41
LRMDA-205ENST00000488759 ZSCAN10Q96SZ4 725 aaPredicted RBP12.49□□□□□ -0.41
LRMDA-205ENST00000488759 TRPV6Q9H1D0 765 aa12.49□□□□□ -0.41
LRMDA-205ENST00000488759 SEMA6BQ9H3T3 888 aa12.49□□□□□ -0.41
LRMDA-205ENST00000488759 TCP11L1Q9NUJ3 509 aa12.49□□□□□ -0.41
LRMDA-205ENST00000488759 TBX21Q9UL17 535 aa12.49□□□□□ -0.41
LRMDA-205ENST00000488759 SUPT16HQ9Y5B9 1047 aaKnown RBP12.49□□□□□ -0.41
LRMDA-205ENST00000488759 TRIP12Q14669 1992 aaPredicted RBP12.49□□□□□ -0.41
LRMDA-205ENST00000488759 ASTN1O14525 1302 aa12.48□□□□□ -0.41
LRMDA-205ENST00000488759 TXNP10599 105 aaKnown RBP12.48□□□□□ -0.41
LRMDA-205ENST00000488759 ASPRV1Q53RT3 343 aa12.48□□□□□ -0.41
LRMDA-205ENST00000488759 ARHGEF16Q5VV41 709 aa12.48□□□□□ -0.41
LRMDA-205ENST00000488759 CCSAPQ6IQ19 270 aaPredicted RBP12.48□□□□□ -0.41
LRMDA-205ENST00000488759 BTNL9Q6UXG8 535 aa12.48□□□□□ -0.41
LRMDA-205ENST00000488759 SEPT14Q6ZU15 432 aa12.48□□□□□ -0.41
LRMDA-205ENST00000488759 ZNF365Q70YC5 407 aa12.48□□□□□ -0.41
LRMDA-205ENST00000488759 OTOP2Q7RTS6 562 aa12.48□□□□□ -0.41
LRMDA-205ENST00000488759 DEFB128Q7Z7B8 93 aa12.48□□□□□ -0.41
LRMDA-205ENST00000488759 HOMER1Q86YM7 354 aa12.48□□□□□ -0.41
LRMDA-205ENST00000488759 MICALL1Q8N3F8 863 aa12.48□□□□□ -0.41
LRMDA-205ENST00000488759 SCFD2Q8WU76 684 aa12.48□□□□□ -0.41
LRMDA-205ENST00000488759 PPP1R13LQ8WUF5 828 aa12.48□□□□□ -0.41
LRMDA-205ENST00000488759 RUFY2Q8WXA3 655 aa12.48□□□□□ -0.41
LRMDA-205ENST00000488759 KATNBL1Q9H079 304 aa12.48□□□□□ -0.41
LRMDA-205ENST00000488759 GNEQ9Y223 722 aaKnown RBP12.48□□□□□ -0.41
LRMDA-205ENST00000488759 BAZ2BQ9UIF8 2168 aaKnown RBP12.47□□□□□ -0.41
LRMDA-205ENST00000488759 COL6A3P12111 3177 aa12.47□□□□□ -0.41
LRMDA-205ENST00000488759 WDR19Q8NEZ3 1342 aa12.47□□□□□ -0.41
LRMDA-205ENST00000488759 SORBS3O60504 671 aa12.47□□□□□ -0.41
LRMDA-205ENST00000488759 B4GALT4O60513 344 aa12.47□□□□□ -0.41
LRMDA-205ENST00000488759 CFBP00751 764 aa12.47□□□□□ -0.41
LRMDA-205ENST00000488759 EIF2AK2P19525 551 aaKnown RBP12.47□□□□□ -0.41
LRMDA-205ENST00000488759 IGFBP4P22692 258 aa12.47□□□□□ -0.41
LRMDA-205ENST00000488759 TTLL4Q14679 1199 aa12.47□□□□□ -0.41
LRMDA-205ENST00000488759 SART3Q15020 963 aaKnown RBP12.47□□□□□ -0.41
LRMDA-205ENST00000488759 DUSP28Q4G0W2 176 aa12.47□□□□□ -0.41
LRMDA-205ENST00000488759 TAPT1Q6NXT6 567 aa12.47□□□□□ -0.41
LRMDA-205ENST00000488759 FBXO11Q86XK2 927 aa12.47□□□□□ -0.41
LRMDA-205ENST00000488759 TICAM2Q86XR7 235 aa12.47□□□□□ -0.41
LRMDA-205ENST00000488759 MCF2L2Q86YR7 1114 aa12.47□□□□□ -0.41
LRMDA-205ENST00000488759 ADGRF4Q8IZF3 695 aa12.47□□□□□ -0.41
LRMDA-205ENST00000488759 IL27Q8NEV9 243 aa12.47□□□□□ -0.41
LRMDA-205ENST00000488759 PIBF1Q8WXW3 757 aa12.47□□□□□ -0.41
LRMDA-205ENST00000488759 SCLYQ96I15 445 aa12.47□□□□□ -0.41
LRMDA-205ENST00000488759 MTG1Q9BT17 334 aaPredicted RBP12.47□□□□□ -0.41
LRMDA-205ENST00000488759 DSCC1Q9BVC3 393 aa12.47□□□□□ -0.41
LRMDA-205ENST00000488759 FTOQ9C0B1 505 aaKnown RBP eCLIP12.47□□□□□ -0.41
LRMDA-205ENST00000488759 IL23AQ9NPF7 189 aa12.47□□□□□ -0.41
LRMDA-205ENST00000488759 UMODL1Q5DID0 1318 aa12.46□□□□□ -0.41
LRMDA-205ENST00000488759 GRXCR1A8MXD5 290 aa12.46□□□□□ -0.41
LRMDA-205ENST00000488759 NKRFO15226 690 aaKnown RBP eCLIP12.46□□□□□ -0.41
LRMDA-205ENST00000488759 FGBP02675 491 aa12.46□□□□□ -0.41
LRMDA-205ENST00000488759 FGRP09769 529 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms