RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 HEATR3Q7Z4Q2 680 aa22.23■■□□□ 1.15
CCM2-216ENST00000488727 TRIM22Q8IYM9 498 aa22.23■■□□□ 1.15
CCM2-216ENST00000488727 FBXO40Q9UH90 709 aa22.23■■□□□ 1.15
CCM2-216ENST00000488727 LCTP09848 1927 aa22.23■■□□□ 1.15
CCM2-216ENST00000488727 PTPDC1A2A3K4 754 aa22.23■■□□□ 1.15
CCM2-216ENST00000488727 SCG2P13521 617 aa22.23■■□□□ 1.15
CCM2-216ENST00000488727 PTPREP23469 700 aa22.23■■□□□ 1.15
CCM2-216ENST00000488727 NASPP49321 788 aaPredicted RBP22.23■■□□□ 1.15
CCM2-216ENST00000488727 CSPP1Q1MSJ5 1256 aa22.23■■□□□ 1.15
CCM2-216ENST00000488727 TYW1BQ6NUM6 668 aa22.23■■□□□ 1.15
CCM2-216ENST00000488727 IVNS1ABPQ9Y6Y0 642 aa22.23■■□□□ 1.15
CCM2-216ENST00000488727 STK36Q9NRP7 1315 aa22.22■■□□□ 1.15
CCM2-216ENST00000488727 FDPSP14324 419 aaKnown RBP22.22■■□□□ 1.15
CCM2-216ENST00000488727 AKAP17AQ02040 695 aaKnown RBP22.22■■□□□ 1.15
CCM2-216ENST00000488727 GRB14Q14449 540 aa22.22■■□□□ 1.15
CCM2-216ENST00000488727 MORN1Q5T089 497 aa22.22■■□□□ 1.15
CCM2-216ENST00000488727 A1CFQ9NQ94 594 aaKnown RBP22.22■■□□□ 1.15
CCM2-216ENST00000488727 GJD2Q9UKL4 321 aa22.22■■□□□ 1.15
CCM2-216ENST00000488727 GABRQQ9UN88 632 aa22.22■■□□□ 1.15
CCM2-216ENST00000488727 MRPL11Q9Y3B7 192 aaKnown RBP22.22■■□□□ 1.15
CCM2-216ENST00000488727 HTTP42858 3142 aa22.22■■□□□ 1.15
CCM2-216ENST00000488727 STRNO43815 780 aa22.21■■□□□ 1.15
CCM2-216ENST00000488727 DEXIO95424 95 aa22.21■■□□□ 1.15
CCM2-216ENST00000488727 FCER1AP12319 257 aa22.21■■□□□ 1.15
CCM2-216ENST00000488727 PRKCZQ05513 592 aa22.21■■□□□ 1.15
CCM2-216ENST00000488727 TBC1D5Q92609 795 aa22.21■■□□□ 1.15
CCM2-216ENST00000488727 SHISA4Q96DD7 197 aa22.21■■□□□ 1.15
CCM2-216ENST00000488727 AIFM3Q96NN9 605 aa22.21■■□□□ 1.15
CCM2-216ENST00000488727 MMP19Q99542 508 aa22.21■■□□□ 1.15
CCM2-216ENST00000488727 CNPY2Q9Y2B0 182 aa22.21■■□□□ 1.15
CCM2-216ENST00000488727 PLXNA1Q9UIW2 1896 aa22.21■■□□□ 1.15
CCM2-216ENST00000488727 SLC15A5A6NIM6 579 aa22.2■■□□□ 1.14
CCM2-216ENST00000488727 STXBP3O00186 592 aa22.2■■□□□ 1.14
CCM2-216ENST00000488727 ADORA2AP29274 412 aa22.2■■□□□ 1.14
CCM2-216ENST00000488727 TRAF1Q13077 416 aa22.2■■□□□ 1.14
CCM2-216ENST00000488727 KCTD2Q14681 263 aa22.2■■□□□ 1.14
CCM2-216ENST00000488727 NSMFQ6X4W1 530 aa22.2■■□□□ 1.14
CCM2-216ENST00000488727 OTOP1Q7RTM1 612 aa22.2■■□□□ 1.14
CCM2-216ENST00000488727 ABRAQ8N0Z2 381 aa22.2■■□□□ 1.14
CCM2-216ENST00000488727 SMARCC2Q8TAQ2 1214 aa22.2■■□□□ 1.14
CCM2-216ENST00000488727 DDX11Q96FC9 970 aa22.2■■□□□ 1.14
CCM2-216ENST00000488727 LLPHQ9BRT6 129 aaKnown RBP22.2■■□□□ 1.14
CCM2-216ENST00000488727 BARHL2Q9NY43 387 aa22.2■■□□□ 1.14
CCM2-216ENST00000488727 ORC3Q9UBD5 711 aaPredicted RBP22.2■■□□□ 1.14
CCM2-216ENST00000488727 TRIM17Q9Y577 477 aa22.2■■□□□ 1.14
CCM2-216ENST00000488727 MYH15Q9Y2K3 1946 aa22.2■■□□□ 1.14
CCM2-216ENST00000488727 GADD45BO75293 160 aaPredicted RBP22.2■■□□□ 1.14
CCM2-216ENST00000488727 GNRH1P01148 92 aa22.2■■□□□ 1.14
CCM2-216ENST00000488727 UBE2HP62256 183 aa22.2■■□□□ 1.14
CCM2-216ENST00000488727 LARP1BQ659C4 914 aaKnown RBP22.2■■□□□ 1.14
CCM2-216ENST00000488727 ANKRD35Q8N283 1001 aa22.2■■□□□ 1.14
CCM2-216ENST00000488727 USP6NLQ92738 828 aa22.2■■□□□ 1.14
CCM2-216ENST00000488727 PPP1R9BQ96SB3 815 aa22.2■■□□□ 1.14
CCM2-216ENST00000488727 GDPD2Q9HCC8 539 aa22.2■■□□□ 1.14
CCM2-216ENST00000488727 SRRDQ9UH36 339 aa22.2■■□□□ 1.14
CCM2-216ENST00000488727 hCG_1984214I3L0E3 225 aa22.19■■□□□ 1.14
CCM2-216ENST00000488727 COBLO75128 1261 aa22.19■■□□□ 1.14
CCM2-216ENST00000488727 PGK2P07205 417 aa22.19■■□□□ 1.14
CCM2-216ENST00000488727 CCDC173Q0VFZ6 552 aa22.19■■□□□ 1.14
CCM2-216ENST00000488727 SLC30A10Q6XR72 485 aa22.19■■□□□ 1.14
CCM2-216ENST00000488727 ZNF713Q8N859 430 aaPredicted RBP22.19■■□□□ 1.14
CCM2-216ENST00000488727 NUDT12Q9BQG2 462 aa22.19■■□□□ 1.14
CCM2-216ENST00000488727 CYP39A1Q9NYL5 469 aa22.19■■□□□ 1.14
CCM2-216ENST00000488727 FLT3LGP49771 235 aa22.18■■□□□ 1.14
CCM2-216ENST00000488727 NAPAP54920 295 aa22.18■■□□□ 1.14
CCM2-216ENST00000488727 ARHGEF6Q15052 776 aa22.18■■□□□ 1.14
CCM2-216ENST00000488727 SOCS4Q8WXH5 440 aa22.18■■□□□ 1.14
CCM2-216ENST00000488727 PRDM10Q9NQV6 1147 aa22.18■■□□□ 1.14
CCM2-216ENST00000488727 PFASO15067 1338 aa22.18■■□□□ 1.14
CCM2-216ENST00000488727 DNAJC25-GNG10A0A024R161 153 aa22.17■■□□□ 1.14
CCM2-216ENST00000488727 VPS37CA5D8V6 355 aaPredicted RBP22.17■■□□□ 1.14
CCM2-216ENST00000488727 RPS6P62753 249 aaKnown RBP22.17■■□□□ 1.14
CCM2-216ENST00000488727 MAP2K5Q13163 448 aa22.17■■□□□ 1.14
CCM2-216ENST00000488727 BAATQ14032 418 aaPredicted RBP22.17■■□□□ 1.14
CCM2-216ENST00000488727 FOXD4L6Q3SYB3 417 aaPredicted RBP22.17■■□□□ 1.14
CCM2-216ENST00000488727 FOXD4L3Q6VB84 417 aaPredicted RBP22.17■■□□□ 1.14
CCM2-216ENST00000488727 RNF207Q6ZRF8 634 aa22.17■■□□□ 1.14
CCM2-216ENST00000488727 RGS22Q8NE09 1264 aa22.17■■□□□ 1.14
CCM2-216ENST00000488727 VPS54Q9P1Q0 977 aa22.17■■□□□ 1.14
CCM2-216ENST00000488727 SYCE3A1L190 88 aa22.17■■□□□ 1.14
CCM2-216ENST00000488727 CFBP00751 764 aa22.17■■□□□ 1.14
CCM2-216ENST00000488727 HOXD10P28358 340 aa22.17■■□□□ 1.14
CCM2-216ENST00000488727 GHRHRQ02643 423 aa22.17■■□□□ 1.14
CCM2-216ENST00000488727 PURBQ96QR8 312 aaKnown RBP22.17■■□□□ 1.14
CCM2-216ENST00000488727 RBSNQ9H1K0 784 aa22.17■■□□□ 1.14
CCM2-216ENST00000488727 CYP2B6P20813 491 aa22.16■■□□□ 1.14
CCM2-216ENST00000488727 HSD17B4P51659 736 aa22.16■■□□□ 1.14
CCM2-216ENST00000488727 PPP1R18Q6NYC8 613 aa22.16■■□□□ 1.14
CCM2-216ENST00000488727 CTU1Q7Z7A3 348 aaKnown RBP22.16■■□□□ 1.14
CCM2-216ENST00000488727 MCF2L2Q86YR7 1114 aa22.16■■□□□ 1.14
CCM2-216ENST00000488727 NPLOC4Q8TAT6 608 aa22.16■■□□□ 1.14
CCM2-216ENST00000488727 RTN4Q9NQC3 1192 aaKnown RBP22.16■■□□□ 1.14
CCM2-216ENST00000488727 GJB4Q9NTQ9 266 aa22.16■■□□□ 1.14
CCM2-216ENST00000488727 CENPFP49454 3210 aa22.16■■□□□ 1.14
CCM2-216ENST00000488727 CALML3P27482 149 aa22.15■■□□□ 1.14
CCM2-216ENST00000488727 HOXA13P31271 388 aaPredicted RBP22.15■■□□□ 1.14
CCM2-216ENST00000488727 CNTN2Q02246 1040 aa22.15■■□□□ 1.14
CCM2-216ENST00000488727 ZNF792Q3KQV3 632 aa22.15■■□□□ 1.14
CCM2-216ENST00000488727 FAM133AQ8N9E0 248 aa22.15■■□□□ 1.14
CCM2-216ENST00000488727 FGD4Q96M96 766 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms