RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 PRKCAP17252 672 aa6.54□□□□□ -1.36
ITGB1-214ENST00000488427 ERVFC1P60507 584 aa6.54□□□□□ -1.36
ITGB1-214ENST00000488427 SSRP1Q08945 709 aaKnown RBP6.54□□□□□ -1.36
ITGB1-214ENST00000488427 MAP4K2Q12851 820 aa6.54□□□□□ -1.36
ITGB1-214ENST00000488427 SERINC3Q13530 473 aa6.54□□□□□ -1.36
ITGB1-214ENST00000488427 LONRF2Q1L5Z9 754 aa6.54□□□□□ -1.36
ITGB1-214ENST00000488427 KRTAP19-4Q3LI73 84 aa6.54□□□□□ -1.36
ITGB1-214ENST00000488427 ACBD5Q5T8D3 534 aaPredicted RBP6.54□□□□□ -1.36
ITGB1-214ENST00000488427 FYB2Q5VWT5 728 aa6.54□□□□□ -1.36
ITGB1-214ENST00000488427 NLGN2Q8NFZ4 835 aa6.54□□□□□ -1.36
ITGB1-214ENST00000488427 BTN2A2Q8WVV5 523 aa6.54□□□□□ -1.36
ITGB1-214ENST00000488427 COPS5Q92905 334 aa6.54□□□□□ -1.36
ITGB1-214ENST00000488427 MRFAP1L1Q96HT8 127 aa6.54□□□□□ -1.36
ITGB1-214ENST00000488427 PPP1R16BQ96T49 567 aa6.54□□□□□ -1.36
ITGB1-214ENST00000488427 MMP19Q99542 508 aa6.54□□□□□ -1.36
ITGB1-214ENST00000488427 DNAJC2Q99543 621 aaKnown RBP6.54□□□□□ -1.36
ITGB1-214ENST00000488427 PDLIM7Q9NR12 457 aa6.54□□□□□ -1.36
ITGB1-214ENST00000488427 ACSL6Q9UKU0 697 aa6.54□□□□□ -1.36
ITGB1-214ENST00000488427 PSPNO60542 156 aa6.53□□□□□ -1.36
ITGB1-214ENST00000488427 FGFR1P11362 822 aa6.53□□□□□ -1.36
ITGB1-214ENST00000488427 TRHRP34981 398 aaPredicted RBP6.53□□□□□ -1.36
ITGB1-214ENST00000488427 PPP2R2AP63151 447 aa6.53□□□□□ -1.36
ITGB1-214ENST00000488427 NR1I3Q14994 352 aa6.53□□□□□ -1.36
ITGB1-214ENST00000488427 BHLHE22Q8NFJ8 381 aaPredicted RBP6.53□□□□□ -1.36
ITGB1-214ENST00000488427 SLC26A8Q96RN1 970 aa6.53□□□□□ -1.36
ITGB1-214ENST00000488427 JMJD8Q96S16 334 aa6.53□□□□□ -1.36
ITGB1-214ENST00000488427 CDC6Q99741 560 aa6.53□□□□□ -1.36
ITGB1-214ENST00000488427 SPATA9Q9BWV2 254 aa6.53□□□□□ -1.36
ITGB1-214ENST00000488427 DCP1AQ9NPI6 582 aaPredicted RBP6.53□□□□□ -1.36
ITGB1-214ENST00000488427 IMPACTQ9P2X3 320 aa6.53□□□□□ -1.36
ITGB1-214ENST00000488427 NUDT5Q9UKK9 219 aa6.53□□□□□ -1.36
ITGB1-214ENST00000488427 A0A1W2PQU0 124 aa6.52□□□□□ -1.37
ITGB1-214ENST00000488427 THBDP07204 575 aa6.52□□□□□ -1.37
ITGB1-214ENST00000488427 PLS3P13797 630 aa6.52□□□□□ -1.37
ITGB1-214ENST00000488427 ECI1P42126 302 aa6.52□□□□□ -1.37
ITGB1-214ENST00000488427 MLANAQ16655 118 aa6.52□□□□□ -1.37
ITGB1-214ENST00000488427 ADGRF1Q5T601 910 aa6.52□□□□□ -1.37
ITGB1-214ENST00000488427 LZTR1Q8N653 840 aa6.52□□□□□ -1.37
ITGB1-214ENST00000488427 FBXO15Q8NCQ5 510 aaPredicted RBP6.52□□□□□ -1.37
ITGB1-214ENST00000488427 USP33Q8TEY7 942 aa6.52□□□□□ -1.37
ITGB1-214ENST00000488427 DIO2Q92813 273 aa6.52□□□□□ -1.37
ITGB1-214ENST00000488427 CLEC1BQ9P126 229 aa6.52□□□□□ -1.37
ITGB1-214ENST00000488427 EBF1Q9UH73 591 aa6.52□□□□□ -1.37
ITGB1-214ENST00000488427 NAT1P18440 290 aa6.51□□□□□ -1.37
ITGB1-214ENST00000488427 LTBRP36941 435 aa6.51□□□□□ -1.37
ITGB1-214ENST00000488427 GFRA1P56159 465 aa6.51□□□□□ -1.37
ITGB1-214ENST00000488427 ERVFRD-1P60508 538 aa6.51□□□□□ -1.37
ITGB1-214ENST00000488427 RPL11P62913 178 aaKnown RBP6.51□□□□□ -1.37
ITGB1-214ENST00000488427 MESP2Q0VG99 397 aa6.51□□□□□ -1.37
ITGB1-214ENST00000488427 PPIL6Q8IXY8 311 aa6.51□□□□□ -1.37
ITGB1-214ENST00000488427 LIN37Q96GY3 246 aaPredicted RBP6.51□□□□□ -1.37
ITGB1-214ENST00000488427 MCMBPQ9BTE3 642 aa6.51□□□□□ -1.37
ITGB1-214ENST00000488427 NSUN3Q9H649 340 aaKnown RBP6.51□□□□□ -1.37
ITGB1-214ENST00000488427 SP110Q9HB58 689 aa6.51□□□□□ -1.37
ITGB1-214ENST00000488427 SNTG2Q9NY99 539 aa6.51□□□□□ -1.37
ITGB1-214ENST00000488427 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.51□□□□□ -1.37
ITGB1-214ENST00000488427 CCDC163A0A0D9SF12 145 aa6.5□□□□□ -1.37
ITGB1-214ENST00000488427 ZNF503-AS2A6NEH8 195 aa6.5□□□□□ -1.37
ITGB1-214ENST00000488427 RBAK-RBAKDNI3L0D1 243 aa6.5□□□□□ -1.37
ITGB1-214ENST00000488427 PEX10O60683 326 aa6.5□□□□□ -1.37
ITGB1-214ENST00000488427 SEMA7AO75326 666 aa6.5□□□□□ -1.37
ITGB1-214ENST00000488427 CYBBP04839 570 aa6.5□□□□□ -1.37
ITGB1-214ENST00000488427 RASA3Q14644 834 aa6.5□□□□□ -1.37
ITGB1-214ENST00000488427 TESK1Q15569 626 aa6.5□□□□□ -1.37
ITGB1-214ENST00000488427 TIGD5Q53EQ6 642 aa6.5□□□□□ -1.37
ITGB1-214ENST00000488427 BICRALQ6AI39 1079 aa6.5□□□□□ -1.37
ITGB1-214ENST00000488427 RSPO2Q6UXX9 243 aaPredicted RBP6.5□□□□□ -1.37
ITGB1-214ENST00000488427 NSMFQ6X4W1 530 aa6.5□□□□□ -1.37
ITGB1-214ENST00000488427 SCUBE1Q8IWY4 988 aa6.5□□□□□ -1.37
ITGB1-214ENST00000488427 TMEM52Q8NDY8 209 aa6.5□□□□□ -1.37
ITGB1-214ENST00000488427 NPLOC4Q8TAT6 608 aa6.5□□□□□ -1.37
ITGB1-214ENST00000488427 TOX2Q96NM4 488 aa6.5□□□□□ -1.37
ITGB1-214ENST00000488427 IER2Q9BTL4 223 aa6.5□□□□□ -1.37
ITGB1-214ENST00000488427 ZSWIM4Q9H7M6 989 aa6.5□□□□□ -1.37
ITGB1-214ENST00000488427 DBR1Q9UK59 544 aaKnown RBP6.5□□□□□ -1.37
ITGB1-214ENST00000488427 TIMM13Q9Y5L4 95 aaPredicted RBP6.5□□□□□ -1.37
ITGB1-214ENST00000488427 SRGAP3O43295 1099 aa6.49□□□□□ -1.37
ITGB1-214ENST00000488427 RAP1GAPP47736 663 aa6.49□□□□□ -1.37
ITGB1-214ENST00000488427 SUMO1P63165 101 aaKnown RBP6.49□□□□□ -1.37
ITGB1-214ENST00000488427 TMEM132EQ6IEE7 984 aa6.49□□□□□ -1.37
ITGB1-214ENST00000488427 PAQR3Q6TCH7 311 aa6.49□□□□□ -1.37
ITGB1-214ENST00000488427 SHISA4Q96DD7 197 aa6.49□□□□□ -1.37
ITGB1-214ENST00000488427 DIRC2Q96SL1 478 aa6.49□□□□□ -1.37
ITGB1-214ENST00000488427 ZFYVE21Q9BQ24 234 aa6.49□□□□□ -1.37
ITGB1-214ENST00000488427 GPRC5CQ9NQ84 441 aa6.49□□□□□ -1.37
ITGB1-214ENST00000488427 USP35Q9P2H5 1018 aa6.49□□□□□ -1.37
ITGB1-214ENST00000488427 COA3Q9Y2R0 106 aaPredicted RBP6.49□□□□□ -1.37
ITGB1-214ENST00000488427 NOTOA8MTQ0 251 aa6.48□□□□□ -1.37
ITGB1-214ENST00000488427 PRODHO43272 600 aa6.48□□□□□ -1.37
ITGB1-214ENST00000488427 PABPC1P11940 636 aaKnown RBP6.48□□□□□ -1.37
ITGB1-214ENST00000488427 RAB3GAP1Q15042 981 aa6.48□□□□□ -1.37
ITGB1-214ENST00000488427 CHRNA2Q15822 529 aa6.48□□□□□ -1.37
ITGB1-214ENST00000488427 CPNE8Q86YQ8 564 aa6.48□□□□□ -1.37
ITGB1-214ENST00000488427 DCP2Q8IU60 420 aaKnown RBP6.48□□□□□ -1.37
ITGB1-214ENST00000488427 SIRT2Q8IXJ6 389 aa6.48□□□□□ -1.37
ITGB1-214ENST00000488427 ZBTB38Q8NAP3 1195 aaPredicted RBP6.48□□□□□ -1.37
ITGB1-214ENST00000488427 TMEM145Q8NBT3 493 aa6.48□□□□□ -1.37
ITGB1-214ENST00000488427 NETO2Q8NC67 525 aa6.48□□□□□ -1.37
ITGB1-214ENST00000488427 ZSWIM2Q8NEG5 633 aa6.48□□□□□ -1.37
ITGB1-214ENST00000488427 THAP3Q8WTV1 239 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms