RNA–Protein interactions for RNA: ENST00000488185.2

PKD1-221, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-221ENST00000488185 SAMD3Q8N6K7 520 aa23.82■■□□□ 1.4
PKD1-221ENST00000488185 NUP133Q8WUM0 1156 aa23.82■■□□□ 1.4
PKD1-221ENST00000488185 TMEM87BQ96K49 555 aa23.82■■□□□ 1.4
PKD1-221ENST00000488185 MPHOSPH6Q99547 160 aaKnown RBP23.82■■□□□ 1.4
PKD1-221ENST00000488185 AMNQ9BXJ7 453 aa23.82■■□□□ 1.4
PKD1-221ENST00000488185 SENP2Q9HC62 589 aa23.82■■□□□ 1.4
PKD1-221ENST00000488185 MAP3K20Q9NYL2 800 aaKnown RBP23.82■■□□□ 1.4
PKD1-221ENST00000488185 ELP1O95163 1332 aa23.82■■□□□ 1.4
PKD1-221ENST00000488185 LCTP09848 1927 aa23.81■■□□□ 1.4
PKD1-221ENST00000488185 B4DLN1 442 aa23.81■■□□□ 1.4
PKD1-221ENST00000488185 ZBTB5O15062 677 aa23.81■■□□□ 1.4
PKD1-221ENST00000488185 SMARCA1P28370 1054 aa23.81■■□□□ 1.4
PKD1-221ENST00000488185 LIFRP42702 1097 aa23.81■■□□□ 1.4
PKD1-221ENST00000488185 FXR1P51114 621 aaKnown RBP eCLIP23.81■■□□□ 1.4
PKD1-221ENST00000488185 MRPL12P52815 198 aaKnown RBP23.81■■□□□ 1.4
PKD1-221ENST00000488185 KCNA10Q16322 511 aa23.81■■□□□ 1.4
PKD1-221ENST00000488185 USH1GQ495M9 461 aa23.81■■□□□ 1.4
PKD1-221ENST00000488185 CATIPQ7Z7H3 387 aa23.81■■□□□ 1.4
PKD1-221ENST00000488185 LY9Q9HBG7 655 aa23.81■■□□□ 1.4
PKD1-221ENST00000488185 TRIOBPQ9H2D6 2365 aa23.81■■□□□ 1.4
PKD1-221ENST00000488185 MCM3APO60318 1980 aa23.8■■□□□ 1.4
PKD1-221ENST00000488185 MYCNP04198 464 aaPredicted RBP23.8■■□□□ 1.4
PKD1-221ENST00000488185 CALML3P27482 149 aa23.8■■□□□ 1.4
PKD1-221ENST00000488185 MAGEA10P43363 369 aaPredicted RBP23.8■■□□□ 1.4
PKD1-221ENST00000488185 SLC35G1Q2M3R5 365 aa23.8■■□□□ 1.4
PKD1-221ENST00000488185 RNF20Q5VTR2 975 aa23.8■■□□□ 1.4
PKD1-221ENST00000488185 CHST3Q7LGC8 479 aa23.8■■□□□ 1.4
PKD1-221ENST00000488185 FERMT2Q96AC1 680 aa23.8■■□□□ 1.4
PKD1-221ENST00000488185 TOX2Q96NM4 488 aa23.8■■□□□ 1.4
PKD1-221ENST00000488185 PRC1O43663 620 aa23.79■■□□□ 1.4
PKD1-221ENST00000488185 DHX16O60231 1041 aaKnown RBP23.79■■□□□ 1.4
PKD1-221ENST00000488185 DDAH1O94760 285 aa23.79■■□□□ 1.4
PKD1-221ENST00000488185 C6orf222P0C671 652 aaPredicted RBP23.79■■□□□ 1.4
PKD1-221ENST00000488185 SMPD1P17405 629 aa23.79■■□□□ 1.4
PKD1-221ENST00000488185 SYN1P17600 705 aa23.79■■□□□ 1.4
PKD1-221ENST00000488185 DUSP28Q4G0W2 176 aa23.79■■□□□ 1.4
PKD1-221ENST00000488185 GNASQ5JWF2 1037 aa23.79■■□□□ 1.4
PKD1-221ENST00000488185 ANKRD33Q7Z3H0 272 aa23.79■■□□□ 1.4
PKD1-221ENST00000488185 VAT1LQ9HCJ6 419 aa23.79■■□□□ 1.4
PKD1-221ENST00000488185 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.78■■□□□ 1.4
PKD1-221ENST00000488185 MYADML2A6NDP7 307 aa23.78■■□□□ 1.4
PKD1-221ENST00000488185 CYTH3O43739 400 aa23.78■■□□□ 1.4
PKD1-221ENST00000488185 TRIM60Q495X7 471 aa23.78■■□□□ 1.4
PKD1-221ENST00000488185 FBXO16Q8IX29 292 aaPredicted RBP23.78■■□□□ 1.4
PKD1-221ENST00000488185 SYTL5Q8TDW5 730 aaPredicted RBP23.78■■□□□ 1.4
PKD1-221ENST00000488185 IWS1Q96ST2 819 aa23.78■■□□□ 1.4
PKD1-221ENST00000488185 PDGFCQ9NRA1 345 aa23.78■■□□□ 1.4
PKD1-221ENST00000488185 ATP11BQ9Y2G3 1177 aa23.78■■□□□ 1.4
PKD1-221ENST00000488185 LRRC37A2A6NM11 1700 aa23.78■■□□□ 1.4
PKD1-221ENST00000488185 SH2B2O14492 632 aaPredicted RBP23.77■■□□□ 1.4
PKD1-221ENST00000488185 PPP1R11O60927 126 aaPredicted RBP23.77■■□□□ 1.4
PKD1-221ENST00000488185 ASGR1P07306 291 aa23.77■■□□□ 1.4
PKD1-221ENST00000488185 CDK7P50613 346 aa23.77■■□□□ 1.4
PKD1-221ENST00000488185 TBC1D5Q92609 795 aa23.77■■□□□ 1.4
PKD1-221ENST00000488185 GLT1D1Q96MS3 346 aa23.77■■□□□ 1.4
PKD1-221ENST00000488185 LZTS2Q9BRK4 669 aa23.77■■□□□ 1.4
PKD1-221ENST00000488185 STARD7Q9NQZ5 370 aa23.77■■□□□ 1.4
PKD1-221ENST00000488185 DDX49Q9Y6V7 483 aaKnown RBP23.77■■□□□ 1.4
PKD1-221ENST00000488185 OPLAHO14841 1288 aa23.76■■□□□ 1.39
PKD1-221ENST00000488185 CABYRO75952 493 aa23.76■■□□□ 1.39
PKD1-221ENST00000488185 KIF5BP33176 963 aa23.76■■□□□ 1.39
PKD1-221ENST00000488185 HSD17B4P51659 736 aa23.76■■□□□ 1.39
PKD1-221ENST00000488185 TLE2Q04725 743 aa23.76■■□□□ 1.39
PKD1-221ENST00000488185 TLK2Q86UE8 772 aa23.76■■□□□ 1.39
PKD1-221ENST00000488185 SGMS1Q86VZ5 419 aa23.76■■□□□ 1.39
PKD1-221ENST00000488185 ZNF654Q8IZM8 581 aa23.76■■□□□ 1.39
PKD1-221ENST00000488185 NSUN6Q8TEA1 469 aaKnown RBP23.76■■□□□ 1.39
PKD1-221ENST00000488185 SPZ1Q9BXG8 430 aa23.76■■□□□ 1.39
PKD1-221ENST00000488185 SEZ6LQ9BYH1 1024 aa23.76■■□□□ 1.39
PKD1-221ENST00000488185 PRKAG2Q9UGJ0 569 aa23.76■■□□□ 1.39
PKD1-221ENST00000488185 PCDHA1Q9Y5I3 950 aa23.76■■□□□ 1.39
PKD1-221ENST00000488185 PNMA6FA0A0J9YX94 578 aa23.75■■□□□ 1.39
PKD1-221ENST00000488185 NKRFO15226 690 aaKnown RBP eCLIP23.75■■□□□ 1.39
PKD1-221ENST00000488185 PDE4DQ08499 809 aa23.75■■□□□ 1.39
PKD1-221ENST00000488185 FSCN1Q16658 493 aaKnown RBP23.75■■□□□ 1.39
PKD1-221ENST00000488185 EEPD1Q7L9B9 569 aa23.75■■□□□ 1.39
PKD1-221ENST00000488185 KCNB2Q92953 911 aa23.75■■□□□ 1.39
PKD1-221ENST00000488185 WDR11Q9BZH6 1224 aa23.75■■□□□ 1.39
PKD1-221ENST00000488185 AP5M1Q9H0R1 490 aa23.75■■□□□ 1.39
PKD1-221ENST00000488185 PDLIM7Q9NR12 457 aa23.75■■□□□ 1.39
PKD1-221ENST00000488185 COL20A1Q9P218 1284 aa23.75■■□□□ 1.39
PKD1-221ENST00000488185 GTF3C3Q9Y5Q9 886 aa23.75■■□□□ 1.39
PKD1-221ENST00000488185 DYNC1LI2O43237 492 aaPredicted RBP23.74■■□□□ 1.39
PKD1-221ENST00000488185 CALM1P0DP23 149 aa23.74■■□□□ 1.39
PKD1-221ENST00000488185 CALM2P0DP24 149 aa23.74■■□□□ 1.39
PKD1-221ENST00000488185 CALM3P0DP25 149 aa23.74■■□□□ 1.39
PKD1-221ENST00000488185 GNAQP50148 359 aa23.74■■□□□ 1.39
PKD1-221ENST00000488185 IRX5P78411 483 aaPredicted RBP23.74■■□□□ 1.39
PKD1-221ENST00000488185 EXOSC10Q01780 885 aaKnown RBP23.74■■□□□ 1.39
PKD1-221ENST00000488185 COL9A3Q14050 684 aaPredicted RBP23.74■■□□□ 1.39
PKD1-221ENST00000488185 NOL8Q76FK4 1167 aaKnown RBP23.74■■□□□ 1.39
PKD1-221ENST00000488185 CTCFLQ8NI51 663 aaPredicted RBP23.74■■□□□ 1.39
PKD1-221ENST00000488185 SCFD2Q8WU76 684 aa23.74■■□□□ 1.39
PKD1-221ENST00000488185 TAAR1Q96RJ0 339 aa23.74■■□□□ 1.39
PKD1-221ENST00000488185 PIGSQ96S52 555 aa23.74■■□□□ 1.39
PKD1-221ENST00000488185 GPHNQ9NQX3 736 aaPredicted RBP23.74■■□□□ 1.39
PKD1-221ENST00000488185 KIAA0355O15063 1070 aa23.73■■□□□ 1.39
PKD1-221ENST00000488185 ZEB2O60315 1214 aa23.73■■□□□ 1.39
PKD1-221ENST00000488185 KRT32Q14532 448 aa23.73■■□□□ 1.39
PKD1-221ENST00000488185 SLC43A3Q8NBI5 491 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms