RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 FOSP01100 380 aaPredicted RBP12.9□□□□□ -0.34
LDLRAP1-207ENST00000488127 ARHGAP25P42331 645 aa12.9□□□□□ -0.34
LDLRAP1-207ENST00000488127 TOB2Q14106 344 aaPredicted RBP12.9□□□□□ -0.34
LDLRAP1-207ENST00000488127 KIF22Q14807 665 aa12.9□□□□□ -0.34
LDLRAP1-207ENST00000488127 FAM102BQ5T8I3 360 aa12.9□□□□□ -0.34
LDLRAP1-207ENST00000488127 OTUD5Q96G74 571 aa12.9□□□□□ -0.34
LDLRAP1-207ENST00000488127 SPC25Q9HBM1 224 aa12.9□□□□□ -0.34
LDLRAP1-207ENST00000488127 KIF23Q02241 960 aaPredicted RBP12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 TXNRD3Q86VQ6 643 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 KIAA1524Q8TCG1 905 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 SYMPKQ92797 1274 aaKnown RBP12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 NT5C3AQ9H0P0 336 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 PCDHB13Q9Y5F0 798 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 PSMD14O00487 310 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 LIG3P49916 1009 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 DNM2P50570 870 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 NDUFA8P51970 172 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 CCNA1P78396 465 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 LRCH2Q5VUJ6 765 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 GALNT17Q6IS24 598 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 C3orf67Q6ZVT6 689 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 PNMA8AQ86V59 439 aaPredicted RBP12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 CABS1Q96KC9 395 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 TAB2Q9NYJ8 693 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 SYNRGQ9UMZ2 1314 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 LACTBP83111 547 aaPredicted RBP12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 SAMD7Q7Z3H4 446 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 KIAA1024Q9UPX6 916 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 BRD3Q15059 726 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 GRIPAP1Q4V328 841 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 LRRC8AQ8IWT6 810 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 GOLGA5Q8TBA6 731 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 TTC14Q96N46 770 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 CSRNP2Q9H175 543 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 NRBP1Q9UHY1 535 aa12.89□□□□□ -0.35
LDLRAP1-207ENST00000488127 REREQ9P2R6 1566 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 F5H6K3 240 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 OSBPP22059 807 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 KLRC3Q07444 240 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 CUL4AQ13619 759 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 MLKLQ8NB16 471 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 RNF169Q8NCN4 708 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 TEKT3Q9BXF9 490 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 A0A087WWV3 80 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 A6NNZ2 444 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 TUBB8Q3ZCM7 444 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 CCDC84Q86UT8 332 aaPredicted RBP12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 MYO5BQ9ULV0 1848 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 BCL9O00512 1426 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 MMP1P03956 469 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 SND1Q7KZF4 910 aaKnown RBP eCLIP12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 C2orf69Q8N8R5 385 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 CAPN7Q9Y6W3 813 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 TNNC1P63316 161 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 CACNB1Q02641 598 aaPredicted RBP12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 ZBTB16Q05516 673 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 STOX1Q6ZVD7 989 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 FBXO33Q7Z6M2 555 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 UBLCP1Q8WVY7 318 aaPredicted RBP12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 ZNF577Q9BSK1 485 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 FOXP1Q9H334 677 aaPredicted RBP12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 POLLQ9UGP5 575 aa12.88□□□□□ -0.35
LDLRAP1-207ENST00000488127 USP17L15C9J2P7 530 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 USP17L10C9JJH3 530 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 USP17L13C9JLJ4 530 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 USP17L11C9JVI0 530 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 USP17L18D6R9N7 530 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 USP17L22D6RA61 530 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 USP17L17D6RBQ6 530 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 USP17L19D6RCP7 530 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 USP17L20D6RJB6 530 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 PRPF3O43395 683 aaKnown RBP12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 BUB1BO60566 1050 aaPredicted RBP12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 COBLO75128 1261 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 VIMP08670 466 aaKnown RBP12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 KRT5P13647 590 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 USP17L24Q0WX57 530 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 LONRF3Q496Y0 759 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 C8orf74Q6P047 294 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 USP17L6PQ6QN14 398 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 OTUD6AQ7L8S5 288 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 NELFBQ8WX92 580 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 STMN4Q9H169 189 aaPredicted RBP12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 RAVER2Q9HCJ3 691 aaKnown RBP12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 TMEM110-MUSTN1A8MSY1 372 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 EFCAB8A8MWE9 144 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 CMA1P23946 247 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 PPFIA1Q13136 1202 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 TMTC3Q6ZXV5 915 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 MB21D2Q8IYB1 491 aaPredicted RBP12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 SLC39A2Q9NP94 309 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 KIAA1468Q9P260 1216 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 PCDHB6Q9Y5E3 794 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 MEIS1O00470 390 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 GMPSP49915 693 aaPredicted RBP12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 CYP2J2P51589 502 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 SLFN12Q8IYM2 578 aa12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 RRP15Q9Y3B9 282 aaKnown RBP12.87□□□□□ -0.35
LDLRAP1-207ENST00000488127 RPAP1Q9BWH6 1393 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms