RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 RNF207Q6ZRF8 634 aa15.33■□□□□ 0.04
COL4A6-207ENST00000487645 DPP9Q86TI2 863 aa15.33■□□□□ 0.04
COL4A6-207ENST00000487645 TRMT44Q8IYL2 757 aaKnown RBP15.33■□□□□ 0.04
COL4A6-207ENST00000487645 GPKOWQ92917 476 aaPredicted RBP eCLIP15.33■□□□□ 0.04
COL4A6-207ENST00000487645 PSTPIP2Q9H939 334 aa15.33■□□□□ 0.04
COL4A6-207ENST00000487645 GABRQQ9UN88 632 aa15.33■□□□□ 0.04
COL4A6-207ENST00000487645 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.33■□□□□ 0.04
COL4A6-207ENST00000487645 LCTP09848 1927 aa15.33■□□□□ 0.04
COL4A6-207ENST00000487645 ESYT2A0FGR8 921 aa15.32■□□□□ 0.04
COL4A6-207ENST00000487645 POTEB2H3BUK9 544 aa15.32■□□□□ 0.04
COL4A6-207ENST00000487645 PIK3CDO00329 1044 aa15.32■□□□□ 0.04
COL4A6-207ENST00000487645 JAK2O60674 1132 aa15.32■□□□□ 0.04
COL4A6-207ENST00000487645 COBLO75128 1261 aa15.32■□□□□ 0.04
COL4A6-207ENST00000487645 PPFIA3O75145 1194 aa15.32■□□□□ 0.04
COL4A6-207ENST00000487645 XBP1P17861 261 aa15.32■□□□□ 0.04
COL4A6-207ENST00000487645 MRPL12P52815 198 aaKnown RBP15.32■□□□□ 0.04
COL4A6-207ENST00000487645 RPS6P62753 249 aaKnown RBP15.32■□□□□ 0.04
COL4A6-207ENST00000487645 PRKCZQ05513 592 aa15.32■□□□□ 0.04
COL4A6-207ENST00000487645 ZNF792Q3KQV3 632 aa15.32■□□□□ 0.04
COL4A6-207ENST00000487645 HSCBQ8IWL3 235 aa15.32■□□□□ 0.04
COL4A6-207ENST00000487645 FAM133AQ8N9E0 248 aa15.32■□□□□ 0.04
COL4A6-207ENST00000487645 TBC1D5Q92609 795 aa15.32■□□□□ 0.04
COL4A6-207ENST00000487645 ZMYND12Q9H0C1 365 aa15.32■□□□□ 0.04
COL4A6-207ENST00000487645 PTPN22Q9Y2R2 807 aa15.32■□□□□ 0.04
COL4A6-207ENST00000487645 MCM3APO60318 1980 aa15.31■□□□□ 0.04
COL4A6-207ENST00000487645 LOC102724159A0A0B4J2E5 919 aa15.31■□□□□ 0.04
COL4A6-207ENST00000487645 SMCO2A6NFE2 343 aa15.31■□□□□ 0.04
COL4A6-207ENST00000487645 GCOM1H8Y6P7 765 aaPredicted RBP15.31■□□□□ 0.04
COL4A6-207ENST00000487645 CFBP00751 764 aa15.31■□□□□ 0.04
COL4A6-207ENST00000487645 PGK2P07205 417 aa15.31■□□□□ 0.04
COL4A6-207ENST00000487645 POLR2MP0CAP2 368 aa15.31■□□□□ 0.04
COL4A6-207ENST00000487645 PWP2Q15269 919 aaKnown RBP15.31■□□□□ 0.04
COL4A6-207ENST00000487645 GALNT17Q6IS24 598 aa15.31■□□□□ 0.04
COL4A6-207ENST00000487645 TYW1BQ6NUM6 668 aa15.31■□□□□ 0.04
COL4A6-207ENST00000487645 ZNF467Q7Z7K2 595 aaPredicted RBP15.31■□□□□ 0.04
COL4A6-207ENST00000487645 CCDC148Q8NFR7 591 aa15.31■□□□□ 0.04
COL4A6-207ENST00000487645 RAET1EQ8TD07 263 aa15.31■□□□□ 0.04
COL4A6-207ENST00000487645 PXYLP1Q8TE99 480 aa15.31■□□□□ 0.04
COL4A6-207ENST00000487645 CUL5Q93034 780 aa15.31■□□□□ 0.04
COL4A6-207ENST00000487645 INTS4Q96HW7 963 aaKnown RBP15.31■□□□□ 0.04
COL4A6-207ENST00000487645 RIC8AQ9NPQ8 531 aa15.31■□□□□ 0.04
COL4A6-207ENST00000487645 MEIS2O14770 477 aa15.3■□□□□ 0.04
COL4A6-207ENST00000487645 CYP2B6P20813 491 aa15.3■□□□□ 0.04
COL4A6-207ENST00000487645 CALML3P27482 149 aa15.3■□□□□ 0.04
COL4A6-207ENST00000487645 GNA11P29992 359 aa15.3■□□□□ 0.04
COL4A6-207ENST00000487645 ADCY7P51828 1080 aa15.3■□□□□ 0.04
COL4A6-207ENST00000487645 CNTN2Q02246 1040 aa15.3■□□□□ 0.04
COL4A6-207ENST00000487645 MCTP2Q6DN12 878 aa15.3■□□□□ 0.04
COL4A6-207ENST00000487645 MSL3Q8N5Y2 521 aaKnown RBP15.3■□□□□ 0.04
COL4A6-207ENST00000487645 DNERQ8NFT8 737 aa15.3■□□□□ 0.04
COL4A6-207ENST00000487645 NPLOC4Q8TAT6 608 aa15.3■□□□□ 0.04
COL4A6-207ENST00000487645 SYTL5Q8TDW5 730 aaPredicted RBP15.3■□□□□ 0.04
COL4A6-207ENST00000487645 APBA2Q99767 749 aa15.3■□□□□ 0.04
COL4A6-207ENST00000487645 ALG1Q9BT22 464 aa15.3■□□□□ 0.04
COL4A6-207ENST00000487645 C6orf50Q9HD87 102 aa15.3■□□□□ 0.04
COL4A6-207ENST00000487645 ADD3Q9UEY8 706 aaKnown RBP15.3■□□□□ 0.04
COL4A6-207ENST00000487645 KIF3AQ9Y496 699 aa15.3■□□□□ 0.04
COL4A6-207ENST00000487645 B4DLN1 442 aa15.29■□□□□ 0.04
COL4A6-207ENST00000487645 NLRP5P59047 1200 aa15.29■□□□□ 0.04
COL4A6-207ENST00000487645 OLFML2BQ68BL8 750 aa15.29■□□□□ 0.04
COL4A6-207ENST00000487645 FBXO46Q6PJ61 603 aaPredicted RBP15.29■□□□□ 0.04
COL4A6-207ENST00000487645 MAMDC4Q6UXC1 1216 aa15.29■□□□□ 0.04
COL4A6-207ENST00000487645 SLC30A10Q6XR72 485 aa15.29■□□□□ 0.04
COL4A6-207ENST00000487645 FAM184AQ8NB25 1140 aa15.29■□□□□ 0.04
COL4A6-207ENST00000487645 BICD2Q8TD16 824 aa15.29■□□□□ 0.04
COL4A6-207ENST00000487645 MAML3Q96JK9 1138 aa15.29■□□□□ 0.04
COL4A6-207ENST00000487645 AIFM3Q96NN9 605 aa15.29■□□□□ 0.04
COL4A6-207ENST00000487645 VPS54Q9P1Q0 977 aa15.29■□□□□ 0.04
COL4A6-207ENST00000487645 SMC3Q9UQE7 1217 aa15.29■□□□□ 0.04
COL4A6-207ENST00000487645 SOWAHBA6NEL2 793 aa15.28■□□□□ 0.04
COL4A6-207ENST00000487645 ADCY3O60266 1144 aa15.28■□□□□ 0.04
COL4A6-207ENST00000487645 DTNBO60941 627 aa15.28■□□□□ 0.04
COL4A6-207ENST00000487645 FOSP01100 380 aaPredicted RBP15.28■□□□□ 0.04
COL4A6-207ENST00000487645 IGHA2P01877 340 aa15.28■□□□□ 0.04
COL4A6-207ENST00000487645 HOXA13P31271 388 aaPredicted RBP15.28■□□□□ 0.04
COL4A6-207ENST00000487645 TRIM29Q14134 588 aa15.28■□□□□ 0.04
COL4A6-207ENST00000487645 SLAIN1Q8ND83 568 aa15.28■□□□□ 0.04
COL4A6-207ENST00000487645 NSUN6Q8TEA1 469 aaKnown RBP15.28■□□□□ 0.04
COL4A6-207ENST00000487645 PHF20Q9BVI0 1012 aa15.28■□□□□ 0.04
COL4A6-207ENST00000487645 ASB14A6NK59 587 aa15.27■□□□□ 0.04
COL4A6-207ENST00000487645 CLK2P49760 499 aaKnown RBP15.27■□□□□ 0.04
COL4A6-207ENST00000487645 BECN1Q14457 450 aa15.27■□□□□ 0.04
COL4A6-207ENST00000487645 USP17L6PQ6QN14 398 aa15.27■□□□□ 0.04
COL4A6-207ENST00000487645 DAGLBQ8NCG7 672 aa15.27■□□□□ 0.04
COL4A6-207ENST00000487645 SHISA4Q96DD7 197 aa15.27■□□□□ 0.04
COL4A6-207ENST00000487645 FGD4Q96M96 766 aa15.27■□□□□ 0.04
COL4A6-207ENST00000487645 TAAR1Q96RJ0 339 aa15.27■□□□□ 0.04
COL4A6-207ENST00000487645 IWS1Q96ST2 819 aa15.27■□□□□ 0.04
COL4A6-207ENST00000487645 RMDN3Q96TC7 470 aa15.27■□□□□ 0.04
COL4A6-207ENST00000487645 MPHOSPH6Q99547 160 aaKnown RBP15.27■□□□□ 0.04
COL4A6-207ENST00000487645 COL20A1Q9P218 1284 aa15.27■□□□□ 0.04
COL4A6-207ENST00000487645 PTCH2Q9Y6C5 1203 aa15.27■□□□□ 0.04
COL4A6-207ENST00000487645 HTTP42858 3142 aa15.27■□□□□ 0.03
COL4A6-207ENST00000487645 KIAA1217Q5T5P2 1943 aa15.27■□□□□ 0.03
COL4A6-207ENST00000487645 SYNGAP1Q96PV0 1343 aa15.26■□□□□ 0.03
COL4A6-207ENST00000487645 MYH7BA7E2Y1 1941 aa15.26■□□□□ 0.03
COL4A6-207ENST00000487645 GJB2P29033 226 aa15.26■□□□□ 0.03
COL4A6-207ENST00000487645 GRK4P32298 578 aa15.26■□□□□ 0.03
COL4A6-207ENST00000487645 ALDH5A1P51649 535 aaPredicted RBP15.26■□□□□ 0.03
COL4A6-207ENST00000487645 CCL14Q16627 93 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms