RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 NUP133Q8WUM0 1156 aa18.47■□□□□ 0.55
GABPA-203ENST00000487266 ABCB11O95342 1321 aa18.47■□□□□ 0.55
GABPA-203ENST00000487266 CTAGE5O15320 804 aa18.46■□□□□ 0.55
GABPA-203ENST00000487266 CYTH3O43739 400 aa18.46■□□□□ 0.55
GABPA-203ENST00000487266 ACLYP53396 1101 aa18.46■□□□□ 0.55
GABPA-203ENST00000487266 MDM2Q00987 491 aaPredicted RBP18.46■□□□□ 0.55
GABPA-203ENST00000487266 BEX3Q00994 111 aa18.46■□□□□ 0.55
GABPA-203ENST00000487266 TNFAIP2Q03169 654 aa18.46■□□□□ 0.55
GABPA-203ENST00000487266 KCNA10Q16322 511 aa18.46■□□□□ 0.55
GABPA-203ENST00000487266 TLK2Q86UE8 772 aa18.46■□□□□ 0.55
GABPA-203ENST00000487266 FBXO11Q86XK2 927 aa18.46■□□□□ 0.55
GABPA-203ENST00000487266 RAB11FIP4Q86YS3 637 aa18.46■□□□□ 0.55
GABPA-203ENST00000487266 MORC4Q8TE76 937 aa18.46■□□□□ 0.55
GABPA-203ENST00000487266 GDF15Q99988 308 aa18.46■□□□□ 0.55
GABPA-203ENST00000487266 UPF3AQ9H1J1 476 aaKnown RBP18.46■□□□□ 0.55
GABPA-203ENST00000487266 PRDM5Q9NQX1 630 aaPredicted RBP18.46■□□□□ 0.55
GABPA-203ENST00000487266 PNMA2Q9UL42 364 aa18.46■□□□□ 0.55
GABPA-203ENST00000487266 GNEQ9Y223 722 aaKnown RBP18.46■□□□□ 0.55
GABPA-203ENST00000487266 SH2B2O14492 632 aaPredicted RBP18.45■□□□□ 0.54
GABPA-203ENST00000487266 OPLAHO14841 1288 aa18.45■□□□□ 0.54
GABPA-203ENST00000487266 RXRAP19793 462 aa18.45■□□□□ 0.54
GABPA-203ENST00000487266 GJA9P57773 515 aa18.45■□□□□ 0.54
GABPA-203ENST00000487266 CASC1Q6TDU7 716 aa18.45■□□□□ 0.54
GABPA-203ENST00000487266 CATIPQ7Z7H3 387 aa18.45■□□□□ 0.54
GABPA-203ENST00000487266 ZNF654Q8IZM8 581 aa18.45■□□□□ 0.54
GABPA-203ENST00000487266 PIBF1Q8WXW3 757 aa18.45■□□□□ 0.54
GABPA-203ENST00000487266 MTMR8Q96EF0 704 aa18.45■□□□□ 0.54
GABPA-203ENST00000487266 PIGSQ96S52 555 aa18.45■□□□□ 0.54
GABPA-203ENST00000487266 VTA1Q9NP79 307 aa18.45■□□□□ 0.54
GABPA-203ENST00000487266 ADD3Q9UEY8 706 aaKnown RBP18.45■□□□□ 0.54
GABPA-203ENST00000487266 ZBTB5O15062 677 aa18.44■□□□□ 0.54
GABPA-203ENST00000487266 ASGR1P07306 291 aa18.44■□□□□ 0.54
GABPA-203ENST00000487266 CST5P28325 142 aaPredicted RBP18.44■□□□□ 0.54
GABPA-203ENST00000487266 MCM5P33992 734 aa18.44■□□□□ 0.54
GABPA-203ENST00000487266 SH3RF1Q7Z6J0 888 aa18.44■□□□□ 0.54
GABPA-203ENST00000487266 RASEFQ8IZ41 740 aa18.44■□□□□ 0.54
GABPA-203ENST00000487266 SYTL5Q8TDW5 730 aaPredicted RBP18.44■□□□□ 0.54
GABPA-203ENST00000487266 TCEANC2Q96MN5 208 aa18.44■□□□□ 0.54
GABPA-203ENST00000487266 STARD7Q9NQZ5 370 aa18.44■□□□□ 0.54
GABPA-203ENST00000487266 PDLIM7Q9NR12 457 aa18.44■□□□□ 0.54
GABPA-203ENST00000487266 PQBP1O60828 265 aaKnown RBP18.43■□□□□ 0.54
GABPA-203ENST00000487266 EDNRBP24530 442 aa18.43■□□□□ 0.54
GABPA-203ENST00000487266 TLE2Q04725 743 aa18.43■□□□□ 0.54
GABPA-203ENST00000487266 PDE4DQ08499 809 aa18.43■□□□□ 0.54
GABPA-203ENST00000487266 ADCK5Q3MIX3 580 aa18.43■□□□□ 0.54
GABPA-203ENST00000487266 GNASQ5JWF2 1037 aa18.43■□□□□ 0.54
GABPA-203ENST00000487266 TAAR1Q96RJ0 339 aa18.43■□□□□ 0.54
GABPA-203ENST00000487266 TSEN34Q9BSV6 310 aaKnown RBP18.43■□□□□ 0.54
GABPA-203ENST00000487266 AMNQ9BXJ7 453 aa18.43■□□□□ 0.54
GABPA-203ENST00000487266 RIOX1Q9H6W3 641 aa18.43■□□□□ 0.54
GABPA-203ENST00000487266 KIAA1217Q5T5P2 1943 aa18.43■□□□□ 0.54
GABPA-203ENST00000487266 MOXD2PA6NHM9 499 aa18.42■□□□□ 0.54
GABPA-203ENST00000487266 DYNC1LI2O43237 492 aaPredicted RBP18.42■□□□□ 0.54
GABPA-203ENST00000487266 PLEKHA8P1O95397 391 aa18.42■□□□□ 0.54
GABPA-203ENST00000487266 CFBP00751 764 aa18.42■□□□□ 0.54
GABPA-203ENST00000487266 C1orf53Q5VUE5 145 aa18.42■□□□□ 0.54
GABPA-203ENST00000487266 NFXL1Q6ZNB6 911 aa18.42■□□□□ 0.54
GABPA-203ENST00000487266 CMTR1Q8N1G2 835 aaKnown RBP18.42■□□□□ 0.54
GABPA-203ENST00000487266 SPC25Q9HBM1 224 aa18.42■□□□□ 0.54
GABPA-203ENST00000487266 MRPL11Q9Y3B7 192 aaKnown RBP18.42■□□□□ 0.54
GABPA-203ENST00000487266 PCDHA1Q9Y5I3 950 aa18.42■□□□□ 0.54
GABPA-203ENST00000487266 TRIM43BA6NCK2 446 aa18.41■□□□□ 0.54
GABPA-203ENST00000487266 SOX1O00570 391 aaPredicted RBP18.41■□□□□ 0.54
GABPA-203ENST00000487266 DDAH1O94760 285 aa18.41■□□□□ 0.54
GABPA-203ENST00000487266 HOXA13P31271 388 aaPredicted RBP18.41■□□□□ 0.54
GABPA-203ENST00000487266 FSCN1Q16658 493 aaKnown RBP18.41■□□□□ 0.54
GABPA-203ENST00000487266 RGS22Q8NE09 1264 aa18.41■□□□□ 0.54
GABPA-203ENST00000487266 DNERQ8NFT8 737 aa18.41■□□□□ 0.54
GABPA-203ENST00000487266 COPS5Q92905 334 aa18.41■□□□□ 0.54
GABPA-203ENST00000487266 TRIM43Q96BQ3 446 aaPredicted RBP18.41■□□□□ 0.54
GABPA-203ENST00000487266 TMEM87BQ96K49 555 aa18.41■□□□□ 0.54
GABPA-203ENST00000487266 UBE2OQ9C0C9 1292 aaKnown RBP18.41■□□□□ 0.54
GABPA-203ENST00000487266 CCDC69A6NI79 296 aa18.4■□□□□ 0.54
GABPA-203ENST00000487266 ARIH2O95376 493 aa18.4■□□□□ 0.54
GABPA-203ENST00000487266 EIF2AK2P19525 551 aaKnown RBP18.4■□□□□ 0.54
GABPA-203ENST00000487266 ITGB8P26012 769 aa18.4■□□□□ 0.54
GABPA-203ENST00000487266 NKX3-2P78367 333 aa18.4■□□□□ 0.54
GABPA-203ENST00000487266 RNF20Q5VTR2 975 aa18.4■□□□□ 0.54
GABPA-203ENST00000487266 IQSEC1Q6DN90 963 aa18.4■□□□□ 0.54
GABPA-203ENST00000487266 CXCL17Q6UXB2 119 aa18.4■□□□□ 0.54
GABPA-203ENST00000487266 MCF2L2Q86YR7 1114 aa18.4■□□□□ 0.54
GABPA-203ENST00000487266 PCSK9Q8NBP7 692 aaKnown RBP18.4■□□□□ 0.54
GABPA-203ENST00000487266 CTCFLQ8NI51 663 aaPredicted RBP18.4■□□□□ 0.54
GABPA-203ENST00000487266 GLT1D1Q96MS3 346 aa18.4■□□□□ 0.54
GABPA-203ENST00000487266 WDR11Q9BZH6 1224 aa18.4■□□□□ 0.54
GABPA-203ENST00000487266 AP5M1Q9H0R1 490 aa18.4■□□□□ 0.54
GABPA-203ENST00000487266 PRKAG2Q9UGJ0 569 aa18.4■□□□□ 0.54
GABPA-203ENST00000487266 LOC102724159A0A0B4J2E5 919 aa18.39■□□□□ 0.53
GABPA-203ENST00000487266 RBM47A0AV96 593 aaKnown RBP18.39■□□□□ 0.53
GABPA-203ENST00000487266 CLTBP09497 229 aa18.39■□□□□ 0.53
GABPA-203ENST00000487266 CPA1P15085 419 aa18.39■□□□□ 0.53
GABPA-203ENST00000487266 BMP8BP34820 402 aa18.39■□□□□ 0.53
GABPA-203ENST00000487266 HSD17B4P51659 736 aa18.39■□□□□ 0.53
GABPA-203ENST00000487266 PWP2Q15269 919 aaKnown RBP18.39■□□□□ 0.53
GABPA-203ENST00000487266 DUSP28Q4G0W2 176 aa18.39■□□□□ 0.53
GABPA-203ENST00000487266 VTI1AQ96AJ9 217 aa18.39■□□□□ 0.53
GABPA-203ENST00000487266 NEK1Q96PY6 1258 aa18.39■□□□□ 0.53
GABPA-203ENST00000487266 RMDN3Q96TC7 470 aa18.39■□□□□ 0.53
GABPA-203ENST00000487266 MTA3Q9BTC8 594 aa18.39■□□□□ 0.53
GABPA-203ENST00000487266 PNMA6FA0A0J9YX94 578 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms