RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 DEFB118Q96PH6 123 aa8.41□□□□□ -1.06
UBE4B-209ENST00000487244 MMP19Q99542 508 aa8.41□□□□□ -1.06
UBE4B-209ENST00000487244 PRR14Q9BWN1 585 aa8.41□□□□□ -1.06
UBE4B-209ENST00000487244 KRT23Q9C075 422 aa8.41□□□□□ -1.06
UBE4B-209ENST00000487244 ANO2Q9NQ90 1003 aa8.41□□□□□ -1.06
UBE4B-209ENST00000487244 RPTORQ8N122 1335 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 SLC27A2O14975 620 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 ATP2A1O14983 1001 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 STRNO43815 780 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 ZBED4O75132 1171 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 CDC45O75419 566 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 SNHG28P0DPA3 235 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 ANTXR2P58335 489 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 ZNF543Q08ER8 600 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 MUM1L1Q5H9M0 696 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 BTNL9Q6UXG8 535 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 DPP9Q86TI2 863 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 IQCA1Q86XH1 822 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 DGKHQ86XP1 1220 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 ABRAQ8N0Z2 381 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 DIS3LQ8TF46 1054 aaKnown RBP8.4□□□□□ -1.06
UBE4B-209ENST00000487244 CHURC1Q8WUH1 139 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 ANKS1AQ92625 1134 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 MAML3Q96JK9 1138 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 FGD4Q96M96 766 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 TTC14Q96N46 770 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 UBAC1Q9BSL1 405 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 CNNM2Q9H8M5 875 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 PPP4R2Q9NY27 417 aa8.4□□□□□ -1.06
UBE4B-209ENST00000487244 DAXXQ9UER7 740 aaPredicted RBP8.4□□□□□ -1.06
UBE4B-209ENST00000487244 PLA2G6O60733 806 aa8.39□□□□□ -1.07
UBE4B-209ENST00000487244 ZMYND10O75800 440 aa8.39□□□□□ -1.07
UBE4B-209ENST00000487244 SGPL1O95470 568 aa8.39□□□□□ -1.07
UBE4B-209ENST00000487244 CYBAP13498 195 aa8.39□□□□□ -1.07
UBE4B-209ENST00000487244 OAZ1P54368 228 aa8.39□□□□□ -1.07
UBE4B-209ENST00000487244 KCNC4Q03721 635 aa8.39□□□□□ -1.07
UBE4B-209ENST00000487244 KCTD2Q14681 263 aa8.39□□□□□ -1.07
UBE4B-209ENST00000487244 NECTIN1Q15223 517 aa8.39□□□□□ -1.07
UBE4B-209ENST00000487244 ZNF792Q3KQV3 632 aa8.39□□□□□ -1.07
UBE4B-209ENST00000487244 PRAMEF19Q5SWL8 479 aa8.39□□□□□ -1.07
UBE4B-209ENST00000487244 SYDE2Q5VT97 1194 aa8.39□□□□□ -1.07
UBE4B-209ENST00000487244 CREB3L3Q68CJ9 461 aa8.39□□□□□ -1.07
UBE4B-209ENST00000487244 KIAA1211Q6ZU35 1233 aa8.39□□□□□ -1.07
UBE4B-209ENST00000487244 UBE2Q1Q7Z7E8 422 aa8.39□□□□□ -1.07
UBE4B-209ENST00000487244 MB21D2Q8IYB1 491 aaPredicted RBP8.39□□□□□ -1.07
UBE4B-209ENST00000487244 TRMT44Q8IYL2 757 aaKnown RBP8.39□□□□□ -1.07
UBE4B-209ENST00000487244 NLRP7Q8WX94 980 aa8.39□□□□□ -1.07
UBE4B-209ENST00000487244 PHOX2BQ99453 314 aa8.39□□□□□ -1.07
UBE4B-209ENST00000487244 UBA5Q9GZZ9 404 aa8.39□□□□□ -1.07
UBE4B-209ENST00000487244 RANBP17Q9H2T7 1088 aaKnown RBP8.39□□□□□ -1.07
UBE4B-209ENST00000487244 KAT14Q9H8E8 782 aa8.39□□□□□ -1.07
UBE4B-209ENST00000487244 HMX1Q9NP08 348 aaPredicted RBP8.39□□□□□ -1.07
UBE4B-209ENST00000487244 RNF146Q9NTX7 359 aa8.39□□□□□ -1.07
UBE4B-209ENST00000487244 CTDP1Q9Y5B0 961 aaPredicted RBP8.39□□□□□ -1.07
UBE4B-209ENST00000487244 DDX49Q9Y6V7 483 aaKnown RBP8.39□□□□□ -1.07
UBE4B-209ENST00000487244 ASTN1O14525 1302 aa8.38□□□□□ -1.07
UBE4B-209ENST00000487244 DNAJC25-GNG10A0A024R161 153 aa8.38□□□□□ -1.07
UBE4B-209ENST00000487244 FARP2O94887 1054 aaPredicted RBP8.38□□□□□ -1.07
UBE4B-209ENST00000487244 TFRCP02786 760 aaKnown RBP8.38□□□□□ -1.07
UBE4B-209ENST00000487244 ALAS1P13196 640 aa8.38□□□□□ -1.07
UBE4B-209ENST00000487244 COPB2P35606 906 aa8.38□□□□□ -1.07
UBE4B-209ENST00000487244 CNTN2Q02246 1040 aa8.38□□□□□ -1.07
UBE4B-209ENST00000487244 TRDNQ13061 729 aa8.38□□□□□ -1.07
UBE4B-209ENST00000487244 SLC35G1Q2M3R5 365 aa8.38□□□□□ -1.07
UBE4B-209ENST00000487244 KMT5BQ4FZB7 885 aa8.38□□□□□ -1.07
UBE4B-209ENST00000487244 IFIT1BQ5T764 474 aaKnown RBP8.38□□□□□ -1.07
UBE4B-209ENST00000487244 MFSD14CQ5VZR4 134 aa8.38□□□□□ -1.07
UBE4B-209ENST00000487244 OLFML2BQ68BL8 750 aa8.38□□□□□ -1.07
UBE4B-209ENST00000487244 RALYLQ86SE5 291 aaKnown RBP8.38□□□□□ -1.07
UBE4B-209ENST00000487244 STAG2Q8N3U4 1231 aa8.38□□□□□ -1.07
UBE4B-209ENST00000487244 NCOA7Q8NI08 942 aa8.38□□□□□ -1.07
UBE4B-209ENST00000487244 PURBQ96QR8 312 aaKnown RBP8.38□□□□□ -1.07
UBE4B-209ENST00000487244 A1CFQ9NQ94 594 aaKnown RBP8.38□□□□□ -1.07
UBE4B-209ENST00000487244 CCPG1Q9ULG6 757 aa8.38□□□□□ -1.07
UBE4B-209ENST00000487244 DDX11L8A8MPP1 907 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 NFIBO00712 420 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 IFIT3O14879 490 aaKnown RBP8.37□□□□□ -1.07
UBE4B-209ENST00000487244 PRC1O43663 620 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 ICAM1P05362 532 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 FDX1P10109 184 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 CNGA1P29973 690 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 NT5C2P49902 561 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 ADCK5Q3MIX3 580 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 CCDC178Q5BJE1 867 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 TMEM67Q5HYA8 995 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 GPATCH4Q5T3I0 446 aaKnown RBP8.37□□□□□ -1.07
UBE4B-209ENST00000487244 ANO1Q5XXA6 986 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 ADGRF4Q8IZF3 695 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 ANKRD35Q8N283 1001 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 CHST13Q8NET6 341 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 IGDCC4Q8TDY8 1250 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 LENG1Q96BZ8 264 aaPredicted RBP8.37□□□□□ -1.07
UBE4B-209ENST00000487244 DDX11Q96FC9 970 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 TRERF1Q96PN7 1200 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 MYL10Q9BUA6 226 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 LRRC2Q9BYS8 371 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 ACAD9Q9H845 621 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 LY9Q9HBG7 655 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 OGDHLQ9ULD0 1010 aa8.37□□□□□ -1.07
UBE4B-209ENST00000487244 SNAI1O95863 264 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms