RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 RPAP3Q9H6T3 665 aaPredicted RBP6.98□□□□□ -1.29
VAMP3-203ENST00000487194 SLC38A10Q9HBR0 1119 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 ANO10Q9NW15 660 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 MAP3K20Q9NYL2 800 aaKnown RBP6.98□□□□□ -1.29
VAMP3-203ENST00000487194 KIAA1468Q9P260 1216 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 RABGAP1Q9Y3P9 1069 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 AFG3L2Q9Y4W6 797 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 POLR2AP24928 1970 aaKnown RBP6.98□□□□□ -1.29
VAMP3-203ENST00000487194 WDR90Q96KV7 1748 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 MYPNQ86TC9 1320 aa6.98□□□□□ -1.29
VAMP3-203ENST00000487194 CYP3A7-CYP3A51PA0A087WV96 503 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 USP17L15C9J2P7 530 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 USP17L13C9JLJ4 530 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 USP17L11C9JVI0 530 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 USP17L18D6R9N7 530 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 USP17L22D6RA61 530 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 USP17L17D6RBQ6 530 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 USP17L19D6RCP7 530 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 USP17L20D6RJB6 530 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 CXCL11O14625 94 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 POLR2DO15514 142 aaKnown RBP6.97□□□□□ -1.29
VAMP3-203ENST00000487194 MARCH6O60337 910 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 SLFN14P0C7P3 912 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 XRCC6P12956 609 aaKnown RBP eCLIP6.97□□□□□ -1.29
VAMP3-203ENST00000487194 CYP3A7P24462 503 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 SREBF1P36956 1147 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 UBA7P41226 1012 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 FXR2P51116 673 aaKnown RBP eCLIP6.97□□□□□ -1.29
VAMP3-203ENST00000487194 OAZ1P54368 228 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 HMGCS2P54868 508 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 USP17L24Q0WX57 530 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 PRKG1Q13976 671 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 TTLL12Q14166 644 aaPredicted RBP6.97□□□□□ -1.29
VAMP3-203ENST00000487194 PDIA5Q14554 519 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 COG2Q14746 738 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 CALCRLQ16602 461 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 SPECC1Q5M775 1068 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 USP17L6PQ6QN14 398 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 SAMD1Q6SPF0 538 aaPredicted RBP6.97□□□□□ -1.29
VAMP3-203ENST00000487194 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.97□□□□□ -1.29
VAMP3-203ENST00000487194 ERO1BQ86YB8 467 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 IQUBQ8NA54 791 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 FAM200AQ8TCP9 573 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 SYMPKQ92797 1274 aaKnown RBP6.97□□□□□ -1.29
VAMP3-203ENST00000487194 MTMR9Q96QG7 549 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 CCSER1Q9C0I3 900 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 NAT10Q9H0A0 1025 aaKnown RBP6.97□□□□□ -1.29
VAMP3-203ENST00000487194 RBSNQ9H1K0 784 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 TMEM60Q9H2L4 133 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 FBXO28Q9NVF7 368 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 HOXC10Q9NYD6 342 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 CCDC39Q9UFE4 941 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 DDX25Q9UHL0 483 aaKnown RBP6.97□□□□□ -1.29
VAMP3-203ENST00000487194 CCPG1Q9ULG6 757 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 MRVI1Q9Y6F6 885 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 SNCAIPQ9Y6H5 919 aa6.97□□□□□ -1.29
VAMP3-203ENST00000487194 SPDYE5A6NIY4 337 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 POTECB2RU33 542 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 VWA5AO00534 786 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 OPLAHO14841 1288 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 TBX3O15119 743 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 SLC26A4O43511 780 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 ACTN4O43707 911 aaKnown RBP6.96□□□□□ -1.3
VAMP3-203ENST00000487194 SMC2O95347 1197 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 CFBP00751 764 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 CYP3A4P08684 503 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 DSG3P32926 999 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 CIITAP33076 1130 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 FKBP1BP68106 108 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 ARHGAP4P98171 946 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 GHRHRQ02643 423 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 PPIL2Q13356 520 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 IL17AQ16552 155 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 TKFCQ3LXA3 575 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 LONRF3Q496Y0 759 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 Q4G0T1 1027 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 CATSPERGQ6ZRH7 1159 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 POTEDQ86YR6 584 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 SLFN12Q8IYM2 578 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 TNS4Q8IZW8 715 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 IGSF22Q8N9C0 903 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 PROCA1Q8NCQ7 364 aaPredicted RBP6.96□□□□□ -1.3
VAMP3-203ENST00000487194 RASSF8Q8NHQ8 419 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 CRYGNQ8WXF5 182 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 EPSTI1Q96J88 318 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 MBOAT7Q96N66 472 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 CUEDC2Q9H467 287 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 MAGEF1Q9HAY2 307 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 LRWD1Q9UFC0 647 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 SERTAD1Q9UHV2 236 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 TUBE1Q9UJT0 475 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 ADAMTS5Q9UNA0 930 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 FZD1Q9UP38 647 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 CLEC11AQ9Y240 323 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 STK24Q9Y6E0 443 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 ZNF536O15090 1300 aa6.96□□□□□ -1.3
VAMP3-203ENST00000487194 PHIPQ8WWQ0 1821 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 ATP2A1O14983 1001 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 SLC37A4O43826 429 aa6.95□□□□□ -1.3
VAMP3-203ENST00000487194 TDP2O95551 362 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms