RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 ADD3Q9UEY8 706 aaKnown RBP9.13□□□□□ -0.95
PDPN-205ENST00000487038 FAM50BQ9Y247 325 aa9.13□□□□□ -0.95
PDPN-205ENST00000487038 CFAP54Q96N23 3096 aa9.13□□□□□ -0.95
PDPN-205ENST00000487038 TET1Q8NFU7 2136 aa9.13□□□□□ -0.95
PDPN-205ENST00000487038 KIAA1217Q5T5P2 1943 aa9.12□□□□□ -0.95
PDPN-205ENST00000487038 DCXO43602 365 aa9.12□□□□□ -0.95
PDPN-205ENST00000487038 LPXNO60711 386 aa9.12□□□□□ -0.95
PDPN-205ENST00000487038 PARNO95453 639 aaKnown RBP9.12□□□□□ -0.95
PDPN-205ENST00000487038 TTLL1O95922 423 aa9.12□□□□□ -0.95
PDPN-205ENST00000487038 MYL3P08590 195 aa9.12□□□□□ -0.95
PDPN-205ENST00000487038 IQCF3P0C7M6 154 aa9.12□□□□□ -0.95
PDPN-205ENST00000487038 RASA1P20936 1047 aa9.12□□□□□ -0.95
PDPN-205ENST00000487038 KCNA5P22460 613 aa9.12□□□□□ -0.95
PDPN-205ENST00000487038 PURAQ00577 322 aaKnown RBP9.12□□□□□ -0.95
PDPN-205ENST00000487038 PTPN11Q06124 597 aaPredicted RBP9.12□□□□□ -0.95
PDPN-205ENST00000487038 DUSP28Q4G0W2 176 aa9.12□□□□□ -0.95
PDPN-205ENST00000487038 PTCRAQ6ISU1 281 aaPredicted RBP9.12□□□□□ -0.95
PDPN-205ENST00000487038 NFRKBQ6P4R8 1299 aa9.12□□□□□ -0.95
PDPN-205ENST00000487038 EEPD1Q7L9B9 569 aa9.12□□□□□ -0.95
PDPN-205ENST00000487038 FAM160B2Q86V87 743 aa9.12□□□□□ -0.95
PDPN-205ENST00000487038 CAGE1Q8TC20 777 aa9.12□□□□□ -0.95
PDPN-205ENST00000487038 RHPN1Q8TCX5 695 aa9.12□□□□□ -0.95
PDPN-205ENST00000487038 CHURC1Q8WUH1 139 aa9.12□□□□□ -0.95
PDPN-205ENST00000487038 VWCEQ96DN2 955 aa9.12□□□□□ -0.95
PDPN-205ENST00000487038 KIF1BPQ96EK5 621 aa9.12□□□□□ -0.95
PDPN-205ENST00000487038 TRERF1Q96PN7 1200 aa9.12□□□□□ -0.95
PDPN-205ENST00000487038 CRBNQ96SW2 442 aa9.12□□□□□ -0.95
PDPN-205ENST00000487038 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.12□□□□□ -0.95
PDPN-205ENST00000487038 CD320Q9NPF0 282 aa9.12□□□□□ -0.95
PDPN-205ENST00000487038 ATG2AQ2TAZ0 1938 aa9.11□□□□□ -0.95
PDPN-205ENST00000487038 C5orf42Q9H799 3197 aa9.11□□□□□ -0.95
PDPN-205ENST00000487038 LOC102724159A0A0B4J2E5 919 aa9.11□□□□□ -0.95
PDPN-205ENST00000487038 SOWAHBA6NEL2 793 aa9.11□□□□□ -0.95
PDPN-205ENST00000487038 TMEM232C9JQI7 657 aa9.11□□□□□ -0.95
PDPN-205ENST00000487038 NKRFO15226 690 aaKnown RBP eCLIP9.11□□□□□ -0.95
PDPN-205ENST00000487038 KPNA6O60684 536 aa9.11□□□□□ -0.95
PDPN-205ENST00000487038 EFCAB14O75071 495 aa9.11□□□□□ -0.95
PDPN-205ENST00000487038 ALAS1P13196 640 aa9.11□□□□□ -0.95
PDPN-205ENST00000487038 IL9P15248 144 aa9.11□□□□□ -0.95
PDPN-205ENST00000487038 WDR5P61964 334 aaKnown RBP9.11□□□□□ -0.95
PDPN-205ENST00000487038 PWP2Q15269 919 aaKnown RBP9.11□□□□□ -0.95
PDPN-205ENST00000487038 SBK1Q52WX2 424 aa9.11□□□□□ -0.95
PDPN-205ENST00000487038 PPP4R3BQ5MIZ7 849 aa9.11□□□□□ -0.95
PDPN-205ENST00000487038 TAPT1Q6NXT6 567 aa9.11□□□□□ -0.95
PDPN-205ENST00000487038 CEP85Q6P2H3 762 aa9.11□□□□□ -0.95
PDPN-205ENST00000487038 ZNF444Q8N0Y2 327 aaPredicted RBP9.11□□□□□ -0.95
PDPN-205ENST00000487038 LRRC47Q8N1G4 583 aaKnown RBP9.11□□□□□ -0.95
PDPN-205ENST00000487038 OR6J1Q8NGC5 347 aa9.11□□□□□ -0.95
PDPN-205ENST00000487038 AFAP1L1Q8TED9 768 aa9.11□□□□□ -0.95
PDPN-205ENST00000487038 MKL1Q969V6 931 aa9.11□□□□□ -0.95
PDPN-205ENST00000487038 TGS1Q96RS0 853 aaKnown RBP9.11□□□□□ -0.95
PDPN-205ENST00000487038 PDGFCQ9NRA1 345 aa9.11□□□□□ -0.95
PDPN-205ENST00000487038 CTNNA3Q9UI47 895 aa9.11□□□□□ -0.95
PDPN-205ENST00000487038 WDR87Q6ZQQ6 2873 aa9.11□□□□□ -0.95
PDPN-205ENST00000487038 PLIN4Q96Q06 1357 aa9.11□□□□□ -0.95
PDPN-205ENST00000487038 MYH6P13533 1939 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.1□□□□□ -0.95
PDPN-205ENST00000487038 MINDY4BA8MYZ0 360 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 ARHGEF15O94989 841 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 TSPY3P0CV98 308 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 TSPY8P0CW00 308 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 PPP2R5BQ15173 497 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 PTPROQ16827 1216 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 TIGD5Q53EQ6 642 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 SLFN13Q68D06 897 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 CNKSR3Q6P9H4 555 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 GIMAP6Q6P9H5 292 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 NSMFQ6X4W1 530 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 STK11IPQ8N1F8 1099 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.1□□□□□ -0.95
PDPN-205ENST00000487038 CEP95Q96GE4 821 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 MFSD14AQ96MC6 490 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 FBXL18Q96ME1 805 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 WDR11Q9BZH6 1224 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 CYP39A1Q9NYL5 469 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 PRKAG3Q9UGI9 489 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 MTUS1Q9ULD2 1270 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 KMT2EQ8IZD2 1858 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 COL4A6Q14031 1691 aa9.1□□□□□ -0.95
PDPN-205ENST00000487038 IGKV6D-41A0A0C4DH26 115 aa9.09□□□□□ -0.95
PDPN-205ENST00000487038 LCHNA4D1U4 455 aa9.09□□□□□ -0.95
PDPN-205ENST00000487038 GRXCR2A6NFK2 248 aa9.09□□□□□ -0.95
PDPN-205ENST00000487038 HMMRO75330 724 aa9.09□□□□□ -0.95
PDPN-205ENST00000487038 GJB5O95377 273 aa9.09□□□□□ -0.95
PDPN-205ENST00000487038 PTGS1P23219 599 aa9.09□□□□□ -0.95
PDPN-205ENST00000487038 SLC1A4P43007 532 aa9.09□□□□□ -0.95
PDPN-205ENST00000487038 TDO2P48775 406 aa9.09□□□□□ -0.95
PDPN-205ENST00000487038 ALDH5A1P51649 535 aaPredicted RBP9.09□□□□□ -0.95
PDPN-205ENST00000487038 ERVK-21P61565 698 aa9.09□□□□□ -0.95
PDPN-205ENST00000487038 NBPF20Q3BBV1 942 aa9.09□□□□□ -0.95
PDPN-205ENST00000487038 MORC4Q8TE76 937 aa9.09□□□□□ -0.95
PDPN-205ENST00000487038 STAG1Q8WVM7 1258 aa9.09□□□□□ -0.95
PDPN-205ENST00000487038 GMCL1Q96IK5 515 aa9.09□□□□□ -0.95
PDPN-205ENST00000487038 RAD9AQ99638 391 aa9.09□□□□□ -0.95
PDPN-205ENST00000487038 UPF3BQ9BZI7 483 aaKnown RBP9.09□□□□□ -0.95
PDPN-205ENST00000487038 BOLA2Q9H3K6 86 aa9.09□□□□□ -0.95
PDPN-205ENST00000487038 SUGCTQ9HAC7 445 aa9.09□□□□□ -0.95
PDPN-205ENST00000487038 MTMR4Q9NYA4 1195 aa9.09□□□□□ -0.95
PDPN-205ENST00000487038 CCPG1Q9ULG6 757 aa9.09□□□□□ -0.95
PDPN-205ENST00000487038 MYH7BA7E2Y1 1941 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms