RNA–Protein interactions for RNA: ENST00000486728.5

TNFRSF18-204, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF18, Length 727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-204ENST00000486728 NCOA7Q8NI08 942 aa22.95■■□□□ 1.26
TNFRSF18-204ENST00000486728 PQBP1O60828 265 aaKnown RBP22.94■■□□□ 1.26
TNFRSF18-204ENST00000486728 ASGR1P07306 291 aa22.94■■□□□ 1.26
TNFRSF18-204ENST00000486728 CALML3P27482 149 aa22.94■■□□□ 1.26
TNFRSF18-204ENST00000486728 USH1GQ495M9 461 aa22.94■■□□□ 1.26
TNFRSF18-204ENST00000486728 KIAA1211Q6ZU35 1233 aa22.94■■□□□ 1.26
TNFRSF18-204ENST00000486728 ANKRD33Q7Z3H0 272 aa22.94■■□□□ 1.26
TNFRSF18-204ENST00000486728 FBXO16Q8IX29 292 aaPredicted RBP22.94■■□□□ 1.26
TNFRSF18-204ENST00000486728 VTI1AQ96AJ9 217 aa22.94■■□□□ 1.26
TNFRSF18-204ENST00000486728 CCDC136Q96JN2 1154 aa22.94■■□□□ 1.26
TNFRSF18-204ENST00000486728 VAT1LQ9HCJ6 419 aa22.94■■□□□ 1.26
TNFRSF18-204ENST00000486728 GNEQ9Y223 722 aaKnown RBP22.94■■□□□ 1.26
TNFRSF18-204ENST00000486728 DNAH12Q6ZR08 3092 aa22.94■■□□□ 1.26
TNFRSF18-204ENST00000486728 A0A0U1RQG5 324 aaPredicted RBP22.93■■□□□ 1.26
TNFRSF18-204ENST00000486728 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.93■■□□□ 1.26
TNFRSF18-204ENST00000486728 MYADML2A6NDP7 307 aa22.93■■□□□ 1.26
TNFRSF18-204ENST00000486728 IFIT3O14879 490 aaKnown RBP22.93■■□□□ 1.26
TNFRSF18-204ENST00000486728 CABYRO75952 493 aa22.93■■□□□ 1.26
TNFRSF18-204ENST00000486728 ANTXR2P58335 489 aa22.93■■□□□ 1.26
TNFRSF18-204ENST00000486728 RPS6P62753 249 aaKnown RBP22.93■■□□□ 1.26
TNFRSF18-204ENST00000486728 SLC30A10Q6XR72 485 aa22.93■■□□□ 1.26
TNFRSF18-204ENST00000486728 MCF2L2Q86YR7 1114 aa22.93■■□□□ 1.26
TNFRSF18-204ENST00000486728 BAZ2BQ9UIF8 2168 aaKnown RBP22.92■■□□□ 1.26
TNFRSF18-204ENST00000486728 PDE4DQ08499 809 aa22.92■■□□□ 1.26
TNFRSF18-204ENST00000486728 TAPT1Q6NXT6 567 aa22.92■■□□□ 1.26
TNFRSF18-204ENST00000486728 EEPD1Q7L9B9 569 aa22.92■■□□□ 1.26
TNFRSF18-204ENST00000486728 SEZ6LQ9BYH1 1024 aa22.92■■□□□ 1.26
TNFRSF18-204ENST00000486728 JMJD4Q9H9V9 463 aa22.92■■□□□ 1.26
TNFRSF18-204ENST00000486728 MRPL11Q9Y3B7 192 aaKnown RBP22.92■■□□□ 1.26
TNFRSF18-204ENST00000486728 SOX1O00570 391 aaPredicted RBP22.91■■□□□ 1.26
TNFRSF18-204ENST00000486728 COL9A3Q14050 684 aaPredicted RBP22.91■■□□□ 1.26
TNFRSF18-204ENST00000486728 FBXO11Q86XK2 927 aa22.91■■□□□ 1.26
TNFRSF18-204ENST00000486728 MB21D2Q8IYB1 491 aaPredicted RBP22.91■■□□□ 1.26
TNFRSF18-204ENST00000486728 PDGFCQ9NRA1 345 aa22.91■■□□□ 1.26
TNFRSF18-204ENST00000486728 TMEM39AQ9NV64 488 aa22.91■■□□□ 1.26
TNFRSF18-204ENST00000486728 MAD2L2Q9UI95 211 aa22.91■■□□□ 1.26
TNFRSF18-204ENST00000486728 LTBP2Q14767 1821 aa22.9■■□□□ 1.26
TNFRSF18-204ENST00000486728 TRIM43BA6NCK2 446 aa22.9■■□□□ 1.26
TNFRSF18-204ENST00000486728 KIAA0355O15063 1070 aa22.9■■□□□ 1.26
TNFRSF18-204ENST00000486728 TLR3O15455 904 aaKnown RBP22.9■■□□□ 1.26
TNFRSF18-204ENST00000486728 RAG1P15918 1043 aa22.9■■□□□ 1.26
TNFRSF18-204ENST00000486728 SMPD1P17405 629 aa22.9■■□□□ 1.26
TNFRSF18-204ENST00000486728 PTGS1P23219 599 aa22.9■■□□□ 1.26
TNFRSF18-204ENST00000486728 TRAF1Q13077 416 aa22.9■■□□□ 1.26
TNFRSF18-204ENST00000486728 FSCN1Q16658 493 aaKnown RBP22.9■■□□□ 1.26
TNFRSF18-204ENST00000486728 QRICH1Q2TAL8 776 aa22.9■■□□□ 1.26
TNFRSF18-204ENST00000486728 TBC1D5Q92609 795 aa22.9■■□□□ 1.26
TNFRSF18-204ENST00000486728 BADQ92934 168 aa22.9■■□□□ 1.26
TNFRSF18-204ENST00000486728 TRIM43Q96BQ3 446 aaPredicted RBP22.9■■□□□ 1.26
TNFRSF18-204ENST00000486728 LRCH3Q96II8 777 aa22.9■■□□□ 1.26
TNFRSF18-204ENST00000486728 ANO2Q9NQ90 1003 aa22.9■■□□□ 1.26
TNFRSF18-204ENST00000486728 PALM3A6NDB9 673 aaPredicted RBP22.89■■□□□ 1.25
TNFRSF18-204ENST00000486728 KLRF2D3W0D1 207 aa22.89■■□□□ 1.25
TNFRSF18-204ENST00000486728 ARVCFO00192 962 aa22.89■■□□□ 1.25
TNFRSF18-204ENST00000486728 SLC27A2O14975 620 aa22.89■■□□□ 1.25
TNFRSF18-204ENST00000486728 NKRFO15226 690 aaKnown RBP eCLIP22.89■■□□□ 1.25
TNFRSF18-204ENST00000486728 DYNC1LI2O43237 492 aaPredicted RBP22.89■■□□□ 1.25
TNFRSF18-204ENST00000486728 WTAPQ15007 396 aa22.89■■□□□ 1.25
TNFRSF18-204ENST00000486728 NECTIN1Q15223 517 aa22.89■■□□□ 1.25
TNFRSF18-204ENST00000486728 DUSP28Q4G0W2 176 aa22.89■■□□□ 1.25
TNFRSF18-204ENST00000486728 TMEM67Q5HYA8 995 aa22.89■■□□□ 1.25
TNFRSF18-204ENST00000486728 TMEM63BQ5T3F8 832 aa22.89■■□□□ 1.25
TNFRSF18-204ENST00000486728 SH3RF1Q7Z6J0 888 aa22.89■■□□□ 1.25
TNFRSF18-204ENST00000486728 IGDCC4Q8TDY8 1250 aa22.89■■□□□ 1.25
TNFRSF18-204ENST00000486728 GPHNQ9NQX3 736 aaPredicted RBP22.89■■□□□ 1.25
TNFRSF18-204ENST00000486728 LAMA3Q16787 3333 aa22.89■■□□□ 1.25
TNFRSF18-204ENST00000486728 CTAGE5O15320 804 aa22.88■■□□□ 1.25
TNFRSF18-204ENST00000486728 EDNRBP24530 442 aa22.88■■□□□ 1.25
TNFRSF18-204ENST00000486728 BEX3Q00994 111 aa22.88■■□□□ 1.25
TNFRSF18-204ENST00000486728 FAAP100Q0VG06 881 aa22.88■■□□□ 1.25
TNFRSF18-204ENST00000486728 SLC35G1Q2M3R5 365 aa22.88■■□□□ 1.25
TNFRSF18-204ENST00000486728 BRDTQ58F21 947 aaPredicted RBP22.88■■□□□ 1.25
TNFRSF18-204ENST00000486728 AMNQ9BXJ7 453 aa22.88■■□□□ 1.25
TNFRSF18-204ENST00000486728 WDR11Q9BZH6 1224 aa22.88■■□□□ 1.25
TNFRSF18-204ENST00000486728 RBM47A0AV96 593 aaKnown RBP22.87■■□□□ 1.25
TNFRSF18-204ENST00000486728 CPT1AP50416 773 aa22.87■■□□□ 1.25
TNFRSF18-204ENST00000486728 CDK7P50613 346 aa22.87■■□□□ 1.25
TNFRSF18-204ENST00000486728 GRM4Q14833 912 aa22.87■■□□□ 1.25
TNFRSF18-204ENST00000486728 PPP2R5BQ15173 497 aa22.87■■□□□ 1.25
TNFRSF18-204ENST00000486728 CREB3L3Q68CJ9 461 aa22.87■■□□□ 1.25
TNFRSF18-204ENST00000486728 SCFD2Q8WU76 684 aa22.87■■□□□ 1.25
TNFRSF18-204ENST00000486728 MTA3Q9BTC8 594 aa22.87■■□□□ 1.25
TNFRSF18-204ENST00000486728 ZBTB5O15062 677 aa22.86■■□□□ 1.25
TNFRSF18-204ENST00000486728 TROAPQ12815 778 aa22.86■■□□□ 1.25
TNFRSF18-204ENST00000486728 CATIPQ7Z7H3 387 aa22.86■■□□□ 1.25
TNFRSF18-204ENST00000486728 SAMD3Q8N6K7 520 aa22.86■■□□□ 1.25
TNFRSF18-204ENST00000486728 NSUN6Q8TEA1 469 aaKnown RBP22.86■■□□□ 1.25
TNFRSF18-204ENST00000486728 POLR3EQ9NVU0 708 aa22.86■■□□□ 1.25
TNFRSF18-204ENST00000486728 MAP3K20Q9NYL2 800 aaKnown RBP22.86■■□□□ 1.25
TNFRSF18-204ENST00000486728 KIAA1217Q5T5P2 1943 aa22.86■■□□□ 1.25
TNFRSF18-204ENST00000486728 PRC1O43663 620 aa22.85■■□□□ 1.25
TNFRSF18-204ENST00000486728 PPP1R11O60927 126 aaPredicted RBP22.85■■□□□ 1.25
TNFRSF18-204ENST00000486728 FPGSQ05932 587 aa22.85■■□□□ 1.25
TNFRSF18-204ENST00000486728 CASC1Q6TDU7 716 aa22.85■■□□□ 1.25
TNFRSF18-204ENST00000486728 CXCL17Q6UXB2 119 aa22.85■■□□□ 1.25
TNFRSF18-204ENST00000486728 MTMR8Q96EF0 704 aa22.85■■□□□ 1.25
TNFRSF18-204ENST00000486728 IWS1Q96ST2 819 aa22.85■■□□□ 1.25
TNFRSF18-204ENST00000486728 LY9Q9HBG7 655 aa22.85■■□□□ 1.25
TNFRSF18-204ENST00000486728 SZT2Q5T011 3432 aa22.85■■□□□ 1.25
TNFRSF18-204ENST00000486728 CDC45O75419 566 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms