RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 RBL2Q08999 1139 aa8.29□□□□□ -1.08
LTN1-206ENST00000486427 RAB3GAP1Q15042 981 aa8.29□□□□□ -1.08
LTN1-206ENST00000486427 INF2Q27J81 1249 aa8.29□□□□□ -1.08
LTN1-206ENST00000486427 KREMEN2Q8NCW0 462 aa8.29□□□□□ -1.08
LTN1-206ENST00000486427 MMP19Q99542 508 aa8.29□□□□□ -1.08
LTN1-206ENST00000486427 SGPP1Q9BX95 441 aa8.29□□□□□ -1.08
LTN1-206ENST00000486427 GULP1Q9UBP9 304 aa8.29□□□□□ -1.08
LTN1-206ENST00000486427 RWDD3Q9Y3V2 267 aa8.29□□□□□ -1.08
LTN1-206ENST00000486427 TRBV23OR9-2A0A075B6M9 112 aa8.28□□□□□ -1.08
LTN1-206ENST00000486427 AGRPO00253 132 aa8.28□□□□□ -1.08
LTN1-206ENST00000486427 C1QTNF9P0C862 333 aa8.28□□□□□ -1.08
LTN1-206ENST00000486427 VIPR1P32241 457 aa8.28□□□□□ -1.08
LTN1-206ENST00000486427 SERINC3Q13530 473 aa8.28□□□□□ -1.08
LTN1-206ENST00000486427 NBPF6Q5VWK0 638 aa8.28□□□□□ -1.08
LTN1-206ENST00000486427 BICRALQ6AI39 1079 aa8.28□□□□□ -1.08
LTN1-206ENST00000486427 DENND5AQ6IQ26 1287 aa8.28□□□□□ -1.08
LTN1-206ENST00000486427 RPTNQ6XPR3 784 aa8.28□□□□□ -1.08
LTN1-206ENST00000486427 CCDC103Q8IW40 242 aa8.28□□□□□ -1.08
LTN1-206ENST00000486427 TMEM145Q8NBT3 493 aa8.28□□□□□ -1.08
LTN1-206ENST00000486427 ST13P5Q8NFI4 369 aaPredicted RBP8.28□□□□□ -1.08
LTN1-206ENST00000486427 BHLHE22Q8NFJ8 381 aaPredicted RBP8.28□□□□□ -1.08
LTN1-206ENST00000486427 KCNN1Q92952 543 aa8.28□□□□□ -1.08
LTN1-206ENST00000486427 C1orf159Q96HA4 380 aa8.28□□□□□ -1.08
LTN1-206ENST00000486427 NBPF4Q96M43 638 aa8.28□□□□□ -1.08
LTN1-206ENST00000486427 MTA3Q9BTC8 594 aa8.28□□□□□ -1.08
LTN1-206ENST00000486427 HIRIP3Q9BW71 556 aaPredicted RBP8.28□□□□□ -1.08
LTN1-206ENST00000486427 GCM1Q9NP62 436 aa8.28□□□□□ -1.08
LTN1-206ENST00000486427 TEX51A0A1B0GUA7 166 aa8.27□□□□□ -1.09
LTN1-206ENST00000486427 CCDC85CA6NKD9 419 aa8.27□□□□□ -1.09
LTN1-206ENST00000486427 HRKO00198 91 aa8.27□□□□□ -1.09
LTN1-206ENST00000486427 U2SURPO15042 1029 aaKnown RBP8.27□□□□□ -1.09
LTN1-206ENST00000486427 TSPAN15O95858 294 aa8.27□□□□□ -1.09
LTN1-206ENST00000486427 DBHP09172 617 aa8.27□□□□□ -1.09
LTN1-206ENST00000486427 KCNJ6P48051 423 aa8.27□□□□□ -1.09
LTN1-206ENST00000486427 SRSF3P84103 164 aaKnown RBP8.27□□□□□ -1.09
LTN1-206ENST00000486427 DPF3Q92784 378 aa8.27□□□□□ -1.09
LTN1-206ENST00000486427 PPP1R16BQ96T49 567 aa8.27□□□□□ -1.09
LTN1-206ENST00000486427 A0A1W2PQJ5 194 aa8.26□□□□□ -1.09
LTN1-206ENST00000486427 SRGAP3O43295 1099 aa8.26□□□□□ -1.09
LTN1-206ENST00000486427 NPHS1O60500 1241 aa8.26□□□□□ -1.09
LTN1-206ENST00000486427 MED14OSP0DP75 135 aa8.26□□□□□ -1.09
LTN1-206ENST00000486427 CBX2Q14781 532 aaPredicted RBP8.26□□□□□ -1.09
LTN1-206ENST00000486427 SF3A1Q15459 793 aaKnown RBP8.26□□□□□ -1.09
LTN1-206ENST00000486427 PKN1Q16512 942 aa8.26□□□□□ -1.09
LTN1-206ENST00000486427 SPATC1Q76KD6 591 aa8.26□□□□□ -1.09
LTN1-206ENST00000486427 CILP2Q8IUL8 1156 aa8.26□□□□□ -1.09
LTN1-206ENST00000486427 SGSM3Q96HU1 749 aa8.26□□□□□ -1.09
LTN1-206ENST00000486427 CCDC140Q96MF4 163 aa8.26□□□□□ -1.09
LTN1-206ENST00000486427 ARHGEF4Q9NR80 690 aa8.26□□□□□ -1.09
LTN1-206ENST00000486427 MBD1Q9UIS9 605 aaPredicted RBP8.26□□□□□ -1.09
LTN1-206ENST00000486427 HCFC2Q9Y5Z7 792 aa8.26□□□□□ -1.09
LTN1-206ENST00000486427 PDPK1O15530 556 aa8.25□□□□□ -1.09
LTN1-206ENST00000486427 SEMA7AO75326 666 aa8.25□□□□□ -1.09
LTN1-206ENST00000486427 TMEM253P0C7T8 217 aa8.25□□□□□ -1.09
LTN1-206ENST00000486427 GLI4P10075 376 aa8.25□□□□□ -1.09
LTN1-206ENST00000486427 GLDCP23378 1020 aa8.25□□□□□ -1.09
LTN1-206ENST00000486427 DLG4P78352 724 aa8.25□□□□□ -1.09
LTN1-206ENST00000486427 PLEKHN1Q494U1 663 aaPredicted RBP8.25□□□□□ -1.09
LTN1-206ENST00000486427 SLC35F1Q5T1Q4 408 aa8.25□□□□□ -1.09
LTN1-206ENST00000486427 TMEM132EQ6IEE7 984 aa8.25□□□□□ -1.09
LTN1-206ENST00000486427 ATG14Q6ZNE5 492 aa8.25□□□□□ -1.09
LTN1-206ENST00000486427 TMC6Q7Z403 805 aa8.25□□□□□ -1.09
LTN1-206ENST00000486427 LZTR1Q8N653 840 aa8.25□□□□□ -1.09
LTN1-206ENST00000486427 SREK1Q8WXA9 508 aaKnown RBP8.25□□□□□ -1.09
LTN1-206ENST00000486427 IER2Q9BTL4 223 aa8.25□□□□□ -1.09
LTN1-206ENST00000486427 CCDC113Q9H0I3 377 aa8.25□□□□□ -1.09
LTN1-206ENST00000486427 CNTD2Q9H8S5 307 aa8.25□□□□□ -1.09
LTN1-206ENST00000486427 RXFP1Q9HBX9 757 aa8.25□□□□□ -1.09
LTN1-206ENST00000486427 SIRPGQ9P1W8 387 aa8.25□□□□□ -1.09
LTN1-206ENST00000486427 NFIBO00712 420 aa8.24□□□□□ -1.09
LTN1-206ENST00000486427 MEFVO15553 781 aaPredicted RBP8.24□□□□□ -1.09
LTN1-206ENST00000486427 CPP00450 1065 aa8.24□□□□□ -1.09
LTN1-206ENST00000486427 CYBBP04839 570 aa8.24□□□□□ -1.09
LTN1-206ENST00000486427 RAP1GAPP47736 663 aa8.24□□□□□ -1.09
LTN1-206ENST00000486427 RASGRF1Q13972 1273 aa8.24□□□□□ -1.09
LTN1-206ENST00000486427 YOD1Q5VVQ6 348 aaPredicted RBP8.24□□□□□ -1.09
LTN1-206ENST00000486427 E4F1Q66K89 784 aaPredicted RBP8.24□□□□□ -1.09
LTN1-206ENST00000486427 PAQR3Q6TCH7 311 aa8.24□□□□□ -1.09
LTN1-206ENST00000486427 PPIL6Q8IXY8 311 aa8.24□□□□□ -1.09
LTN1-206ENST00000486427 DIO2Q92813 273 aa8.24□□□□□ -1.09
LTN1-206ENST00000486427 CD320Q9NPF0 282 aa8.24□□□□□ -1.09
LTN1-206ENST00000486427 ZC3H12DA2A288 527 aaKnown RBP8.23□□□□□ -1.09
LTN1-206ENST00000486427 FAM221BA6H8Z2 402 aa8.23□□□□□ -1.09
LTN1-206ENST00000486427 ABLIM1O14639 778 aa8.23□□□□□ -1.09
LTN1-206ENST00000486427 DLX3O60479 287 aa8.23□□□□□ -1.09
LTN1-206ENST00000486427 FUCA1P04066 466 aa8.23□□□□□ -1.09
LTN1-206ENST00000486427 LCP1P13796 627 aa8.23□□□□□ -1.09
LTN1-206ENST00000486427 YBX3P16989 372 aaKnown RBP eCLIP8.23□□□□□ -1.09
LTN1-206ENST00000486427 MAPKAPK2P49137 400 aa8.23□□□□□ -1.09
LTN1-206ENST00000486427 EPHB3P54753 998 aa8.23□□□□□ -1.09
LTN1-206ENST00000486427 HSP90AA2PQ14568 343 aaPredicted RBP8.23□□□□□ -1.09
LTN1-206ENST00000486427 RASA3Q14644 834 aa8.23□□□□□ -1.09
LTN1-206ENST00000486427 NR1I3Q14994 352 aa8.23□□□□□ -1.09
LTN1-206ENST00000486427 TESK1Q15569 626 aa8.23□□□□□ -1.09
LTN1-206ENST00000486427 ACBD5Q5T8D3 534 aaPredicted RBP8.23□□□□□ -1.09
LTN1-206ENST00000486427 DNAJC2Q99543 621 aaKnown RBP8.23□□□□□ -1.09
LTN1-206ENST00000486427 AARSD1Q9BTE6 412 aaKnown RBP8.23□□□□□ -1.09
LTN1-206ENST00000486427 SIRT5Q9NXA8 310 aa8.23□□□□□ -1.09
LTN1-206ENST00000486427 BTG4Q9NY30 223 aa8.23□□□□□ -1.09
LTN1-206ENST00000486427 MARCH2Q9P0N8 246 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms