RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 A0A1W2PQY0 241 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 B4DLN1 442 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 ZBTB5O15062 677 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 CFBP00751 764 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 SMPD1P17405 629 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 MRPL12P52815 198 aaKnown RBP12.82□□□□□ -0.36
SNX21-211ENST00000486336 ACLYP53396 1101 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 MDM2Q00987 491 aaPredicted RBP12.82□□□□□ -0.36
SNX21-211ENST00000486336 BEX3Q00994 111 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 IQSEC1Q6DN90 963 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 TAPT1Q6NXT6 567 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 RAB11FIP4Q86YS3 637 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 ZNF654Q8IZM8 581 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 TMTC2Q8N394 836 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 PCSK9Q8NBP7 692 aaKnown RBP12.82□□□□□ -0.36
SNX21-211ENST00000486336 RGS22Q8NE09 1264 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 KLHDC9Q8NEP7 349 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 CTCFLQ8NI51 663 aaPredicted RBP12.82□□□□□ -0.36
SNX21-211ENST00000486336 TMEM87BQ96K49 555 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 TAAR1Q96RJ0 339 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 PIGSQ96S52 555 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 VTA1Q9NP79 307 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 PRDM5Q9NQX1 630 aaPredicted RBP12.82□□□□□ -0.36
SNX21-211ENST00000486336 STARD7Q9NQZ5 370 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 PPP4R2Q9NY27 417 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 PCDHA1Q9Y5I3 950 aa12.82□□□□□ -0.36
SNX21-211ENST00000486336 SH2B2O14492 632 aaPredicted RBP12.81□□□□□ -0.36
SNX21-211ENST00000486336 ASGR1P07306 291 aa12.81□□□□□ -0.36
SNX21-211ENST00000486336 PTGS1P23219 599 aa12.81□□□□□ -0.36
SNX21-211ENST00000486336 MAGEA10P43363 369 aaPredicted RBP12.81□□□□□ -0.36
SNX21-211ENST00000486336 GJA9P57773 515 aa12.81□□□□□ -0.36
SNX21-211ENST00000486336 TROAPQ12815 778 aa12.81□□□□□ -0.36
SNX21-211ENST00000486336 COL9A3Q14050 684 aaPredicted RBP12.81□□□□□ -0.36
SNX21-211ENST00000486336 TLK2Q86UE8 772 aa12.81□□□□□ -0.36
SNX21-211ENST00000486336 DNERQ8NFT8 737 aa12.81□□□□□ -0.36
SNX21-211ENST00000486336 SYTL5Q8TDW5 730 aaPredicted RBP12.81□□□□□ -0.36
SNX21-211ENST00000486336 MORC4Q8TE76 937 aa12.81□□□□□ -0.36
SNX21-211ENST00000486336 NEK1Q96PY6 1258 aa12.81□□□□□ -0.36
SNX21-211ENST00000486336 LBHD1Q9BQE6 289 aaPredicted RBP12.81□□□□□ -0.36
SNX21-211ENST00000486336 WDR11Q9BZH6 1224 aa12.81□□□□□ -0.36
SNX21-211ENST00000486336 BAZ2BQ9UIF8 2168 aaKnown RBP12.8□□□□□ -0.36
SNX21-211ENST00000486336 MOXD2PA6NHM9 499 aa12.8□□□□□ -0.36
SNX21-211ENST00000486336 ZEB2O60315 1214 aa12.8□□□□□ -0.36
SNX21-211ENST00000486336 PQBP1O60828 265 aaKnown RBP12.8□□□□□ -0.36
SNX21-211ENST00000486336 PPP1R11O60927 126 aaPredicted RBP12.8□□□□□ -0.36
SNX21-211ENST00000486336 DDAH1O94760 285 aa12.8□□□□□ -0.36
SNX21-211ENST00000486336 RXRAP19793 462 aa12.8□□□□□ -0.36
SNX21-211ENST00000486336 KIF5BP33176 963 aa12.8□□□□□ -0.36
SNX21-211ENST00000486336 TLE2Q04725 743 aa12.8□□□□□ -0.36
SNX21-211ENST00000486336 SLC35G1Q2M3R5 365 aa12.8□□□□□ -0.36
SNX21-211ENST00000486336 TMEM63BQ5T3F8 832 aa12.8□□□□□ -0.36
SNX21-211ENST00000486336 ARHGEF16Q5VV41 709 aa12.8□□□□□ -0.36
SNX21-211ENST00000486336 SYNE3Q6ZMZ3 975 aa12.8□□□□□ -0.36
SNX21-211ENST00000486336 NSUN6Q8TEA1 469 aaKnown RBP12.8□□□□□ -0.36
SNX21-211ENST00000486336 MTMR8Q96EF0 704 aa12.8□□□□□ -0.36
SNX21-211ENST00000486336 GLT1D1Q96MS3 346 aa12.8□□□□□ -0.36
SNX21-211ENST00000486336 RMDN3Q96TC7 470 aa12.8□□□□□ -0.36
SNX21-211ENST00000486336 MTA3Q9BTC8 594 aa12.8□□□□□ -0.36
SNX21-211ENST00000486336 UBE2OQ9C0C9 1292 aaKnown RBP12.8□□□□□ -0.36
SNX21-211ENST00000486336 UPF3AQ9H1J1 476 aaKnown RBP12.8□□□□□ -0.36
SNX21-211ENST00000486336 RIOX1Q9H6W3 641 aa12.8□□□□□ -0.36
SNX21-211ENST00000486336 GNEQ9Y223 722 aaKnown RBP12.8□□□□□ -0.36
SNX21-211ENST00000486336 SLC12A7Q9Y666 1083 aa12.8□□□□□ -0.36
SNX21-211ENST00000486336 MYH6P13533 1939 aa12.8□□□□□ -0.36
SNX21-211ENST00000486336 LOC102724159A0A0B4J2E5 919 aa12.79□□□□□ -0.36
SNX21-211ENST00000486336 PNMA6FA0A0J9YX94 578 aa12.79□□□□□ -0.36
SNX21-211ENST00000486336 CYTH3O43739 400 aa12.79□□□□□ -0.36
SNX21-211ENST00000486336 EIF2AK2P19525 551 aaKnown RBP12.79□□□□□ -0.36
SNX21-211ENST00000486336 CST5P28325 142 aaPredicted RBP12.79□□□□□ -0.36
SNX21-211ENST00000486336 TRAF1Q13077 416 aa12.79□□□□□ -0.36
SNX21-211ENST00000486336 PWP2Q15269 919 aaKnown RBP12.79□□□□□ -0.36
SNX21-211ENST00000486336 FSCN1Q16658 493 aaKnown RBP12.79□□□□□ -0.36
SNX21-211ENST00000486336 CCSAPQ6IQ19 270 aaPredicted RBP12.79□□□□□ -0.36
SNX21-211ENST00000486336 SEPT14Q6ZU15 432 aa12.79□□□□□ -0.36
SNX21-211ENST00000486336 RASEFQ8IZ41 740 aa12.79□□□□□ -0.36
SNX21-211ENST00000486336 RRP36Q96EU6 259 aaKnown RBP12.79□□□□□ -0.36
SNX21-211ENST00000486336 TCEANC2Q96MN5 208 aa12.79□□□□□ -0.36
SNX21-211ENST00000486336 GDF15Q99988 308 aa12.79□□□□□ -0.36
SNX21-211ENST00000486336 COL20A1Q9P218 1284 aa12.79□□□□□ -0.36
SNX21-211ENST00000486336 NAP1L2Q9ULW6 460 aaPredicted RBP12.79□□□□□ -0.36
SNX21-211ENST00000486336 LCTP09848 1927 aa12.78□□□□□ -0.36
SNX21-211ENST00000486336 DCDC2CA8MYV0 355 aa12.78□□□□□ -0.36
SNX21-211ENST00000486336 CALM1P0DP23 149 aa12.78□□□□□ -0.36
SNX21-211ENST00000486336 CALM2P0DP24 149 aa12.78□□□□□ -0.36
SNX21-211ENST00000486336 CALM3P0DP25 149 aa12.78□□□□□ -0.36
SNX21-211ENST00000486336 HOXA13P31271 388 aaPredicted RBP12.78□□□□□ -0.36
SNX21-211ENST00000486336 LIFRP42702 1097 aa12.78□□□□□ -0.36
SNX21-211ENST00000486336 GNAQP50148 359 aa12.78□□□□□ -0.36
SNX21-211ENST00000486336 FGD1P98174 961 aa12.78□□□□□ -0.36
SNX21-211ENST00000486336 KRT32Q14532 448 aa12.78□□□□□ -0.36
SNX21-211ENST00000486336 SNX17Q15036 470 aa12.78□□□□□ -0.36
SNX21-211ENST00000486336 PPP2R5BQ15173 497 aa12.78□□□□□ -0.36
SNX21-211ENST00000486336 STXBP2Q15833 593 aa12.78□□□□□ -0.36
SNX21-211ENST00000486336 ADCK5Q3MIX3 580 aa12.78□□□□□ -0.36
SNX21-211ENST00000486336 DUSP28Q4G0W2 176 aa12.78□□□□□ -0.36
SNX21-211ENST00000486336 CXCL17Q6UXB2 119 aa12.78□□□□□ -0.36
SNX21-211ENST00000486336 DHX32Q7L7V1 743 aaKnown RBP12.78□□□□□ -0.36
SNX21-211ENST00000486336 SH3RF1Q7Z6J0 888 aa12.78□□□□□ -0.36
SNX21-211ENST00000486336 CMTR1Q8N1G2 835 aaKnown RBP12.78□□□□□ -0.36
SNX21-211ENST00000486336 CCDC82Q8N4S0 544 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms