RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 PURBQ96QR8 312 aaKnown RBP25.63■■□□□ 1.69
HLA-F-228ENST00000486194 CABYRO75952 493 aa25.62■■□□□ 1.69
HLA-F-228ENST00000486194 SMPD1P17405 629 aa25.62■■□□□ 1.69
HLA-F-228ENST00000486194 FBXO11Q86XK2 927 aa25.62■■□□□ 1.69
HLA-F-228ENST00000486194 MRPL11Q9Y3B7 192 aaKnown RBP25.62■■□□□ 1.69
HLA-F-228ENST00000486194 RANBP2P49792 3224 aaKnown RBP25.61■■□□□ 1.69
HLA-F-228ENST00000486194 A0A0U1RQG5 324 aaPredicted RBP25.61■■□□□ 1.69
HLA-F-228ENST00000486194 PDE4DQ08499 809 aa25.61■■□□□ 1.69
HLA-F-228ENST00000486194 QRICH1Q2TAL8 776 aa25.61■■□□□ 1.69
HLA-F-228ENST00000486194 GPR153Q6NV75 609 aa25.61■■□□□ 1.69
HLA-F-228ENST00000486194 JMJD4Q9H9V9 463 aa25.61■■□□□ 1.69
HLA-F-228ENST00000486194 PDGFCQ9NRA1 345 aa25.61■■□□□ 1.69
HLA-F-228ENST00000486194 RBM8AQ9Y5S9 174 aaKnown RBP25.61■■□□□ 1.69
HLA-F-228ENST00000486194 KLRF2D3W0D1 207 aa25.6■■□□□ 1.69
HLA-F-228ENST00000486194 SOX1O00570 391 aaPredicted RBP25.6■■□□□ 1.69
HLA-F-228ENST00000486194 CTAGE5O15320 804 aa25.6■■□□□ 1.69
HLA-F-228ENST00000486194 DYNC1LI2O43237 492 aaPredicted RBP25.6■■□□□ 1.69
HLA-F-228ENST00000486194 WTAPQ15007 396 aa25.6■■□□□ 1.69
HLA-F-228ENST00000486194 FSCN1Q16658 493 aaKnown RBP25.6■■□□□ 1.69
HLA-F-228ENST00000486194 VAT1LQ9HCJ6 419 aa25.6■■□□□ 1.69
HLA-F-228ENST00000486194 TMEM39AQ9NV64 488 aa25.6■■□□□ 1.69
HLA-F-228ENST00000486194 DDX49Q9Y6V7 483 aaKnown RBP25.6■■□□□ 1.69
HLA-F-228ENST00000486194 TRIM43BA6NCK2 446 aa25.59■■□□□ 1.69
HLA-F-228ENST00000486194 KIAA0355O15063 1070 aa25.59■■□□□ 1.69
HLA-F-228ENST00000486194 IRX5P78411 483 aaPredicted RBP25.59■■□□□ 1.69
HLA-F-228ENST00000486194 TRAF1Q13077 416 aa25.59■■□□□ 1.69
HLA-F-228ENST00000486194 DUSP28Q4G0W2 176 aa25.59■■□□□ 1.69
HLA-F-228ENST00000486194 BMP2KLQ5H9B9 411 aa25.59■■□□□ 1.69
HLA-F-228ENST00000486194 SH3RF1Q7Z6J0 888 aa25.59■■□□□ 1.69
HLA-F-228ENST00000486194 BADQ92934 168 aa25.59■■□□□ 1.69
HLA-F-228ENST00000486194 TRIM43Q96BQ3 446 aaPredicted RBP25.59■■□□□ 1.69
HLA-F-228ENST00000486194 AMNQ9BXJ7 453 aa25.59■■□□□ 1.69
HLA-F-228ENST00000486194 SEZ6LQ9BYH1 1024 aa25.59■■□□□ 1.69
HLA-F-228ENST00000486194 LRRC37A2A6NM11 1700 aa25.59■■□□□ 1.69
HLA-F-228ENST00000486194 PALM3A6NDB9 673 aaPredicted RBP25.58■■□□□ 1.69
HLA-F-228ENST00000486194 ARVCFO00192 962 aa25.58■■□□□ 1.69
HLA-F-228ENST00000486194 RAG1P15918 1043 aa25.58■■□□□ 1.69
HLA-F-228ENST00000486194 EDNRBP24530 442 aa25.58■■□□□ 1.69
HLA-F-228ENST00000486194 BEX3Q00994 111 aa25.58■■□□□ 1.69
HLA-F-228ENST00000486194 STAG2Q8N3U4 1231 aa25.58■■□□□ 1.69
HLA-F-228ENST00000486194 LRCH3Q96II8 777 aa25.58■■□□□ 1.69
HLA-F-228ENST00000486194 ESYT1Q9BSJ8 1104 aa25.58■■□□□ 1.69
HLA-F-228ENST00000486194 WDR11Q9BZH6 1224 aa25.58■■□□□ 1.69
HLA-F-228ENST00000486194 MAD2L2Q9UI95 211 aa25.58■■□□□ 1.69
HLA-F-228ENST00000486194 LCTP09848 1927 aa25.58■■□□□ 1.69
HLA-F-228ENST00000486194 RBM47A0AV96 593 aaKnown RBP25.57■■□□□ 1.68
HLA-F-228ENST00000486194 NKRFO15226 690 aaKnown RBP eCLIP25.57■■□□□ 1.68
HLA-F-228ENST00000486194 CDK7P50613 346 aa25.57■■□□□ 1.68
HLA-F-228ENST00000486194 FAAP100Q0VG06 881 aa25.57■■□□□ 1.68
HLA-F-228ENST00000486194 GRM4Q14833 912 aa25.57■■□□□ 1.68
HLA-F-228ENST00000486194 TMEM67Q5HYA8 995 aa25.57■■□□□ 1.68
HLA-F-228ENST00000486194 CATIPQ7Z7H3 387 aa25.57■■□□□ 1.68
HLA-F-228ENST00000486194 MTA3Q9BTC8 594 aa25.57■■□□□ 1.68
HLA-F-228ENST00000486194 LTBP2Q14767 1821 aa25.56■■□□□ 1.68
HLA-F-228ENST00000486194 ZBTB5O15062 677 aa25.56■■□□□ 1.68
HLA-F-228ENST00000486194 TLR3O15455 904 aaKnown RBP25.56■■□□□ 1.68
HLA-F-228ENST00000486194 STOX1Q6ZVD7 989 aa25.56■■□□□ 1.68
HLA-F-228ENST00000486194 NSUN6Q8TEA1 469 aaKnown RBP25.56■■□□□ 1.68
HLA-F-228ENST00000486194 SCFD2Q8WU76 684 aa25.56■■□□□ 1.68
HLA-F-228ENST00000486194 MTMR8Q96EF0 704 aa25.56■■□□□ 1.68
HLA-F-228ENST00000486194 LSG1Q9H089 658 aaKnown RBP25.56■■□□□ 1.68
HLA-F-228ENST00000486194 TAF6LQ9Y6J9 622 aa25.56■■□□□ 1.68
HLA-F-228ENST00000486194 PPP2R5BQ15173 497 aa25.55■■□□□ 1.68
HLA-F-228ENST00000486194 BRDTQ58F21 947 aaPredicted RBP25.55■■□□□ 1.68
HLA-F-228ENST00000486194 CASC1Q6TDU7 716 aa25.55■■□□□ 1.68
HLA-F-228ENST00000486194 CXCL17Q6UXB2 119 aa25.55■■□□□ 1.68
HLA-F-228ENST00000486194 MB21D2Q8IYB1 491 aaPredicted RBP25.55■■□□□ 1.68
HLA-F-228ENST00000486194 MAP3K20Q9NYL2 800 aaKnown RBP25.55■■□□□ 1.68
HLA-F-228ENST00000486194 CPT1AP50416 773 aa25.54■■□□□ 1.68
HLA-F-228ENST00000486194 TROAPQ12815 778 aa25.54■■□□□ 1.68
HLA-F-228ENST00000486194 CHST3Q7LGC8 479 aa25.54■■□□□ 1.68
HLA-F-228ENST00000486194 SAMD3Q8N6K7 520 aa25.54■■□□□ 1.68
HLA-F-228ENST00000486194 SYTL5Q8TDW5 730 aaPredicted RBP25.54■■□□□ 1.68
HLA-F-228ENST00000486194 IGDCC4Q8TDY8 1250 aa25.54■■□□□ 1.68
HLA-F-228ENST00000486194 IWS1Q96ST2 819 aa25.54■■□□□ 1.68
HLA-F-228ENST00000486194 ANO2Q9NQ90 1003 aa25.54■■□□□ 1.68
HLA-F-228ENST00000486194 POLR3EQ9NVU0 708 aa25.54■■□□□ 1.68
HLA-F-228ENST00000486194 TTLL4Q14679 1199 aa25.53■■□□□ 1.68
HLA-F-228ENST00000486194 TMTC2Q8N394 836 aa25.53■■□□□ 1.68
HLA-F-228ENST00000486194 RMDN3Q96TC7 470 aa25.53■■□□□ 1.68
HLA-F-228ENST00000486194 RIOX1Q9H6W3 641 aa25.53■■□□□ 1.68
HLA-F-228ENST00000486194 PCDHA1Q9Y5I3 950 aa25.53■■□□□ 1.68
HLA-F-228ENST00000486194 DNAH12Q6ZR08 3092 aa25.52■■□□□ 1.68
HLA-F-228ENST00000486194 CFBP00751 764 aa25.52■■□□□ 1.68
HLA-F-228ENST00000486194 MCM5P33992 734 aa25.52■■□□□ 1.68
HLA-F-228ENST00000486194 ANTXR2P58335 489 aa25.52■■□□□ 1.68
HLA-F-228ENST00000486194 FPGSQ05932 587 aa25.52■■□□□ 1.68
HLA-F-228ENST00000486194 ITGA7Q13683 1181 aa25.52■■□□□ 1.68
HLA-F-228ENST00000486194 FAM126BQ8IXS8 530 aa25.52■■□□□ 1.68
HLA-F-228ENST00000486194 SLC43A3Q8NBI5 491 aa25.52■■□□□ 1.68
HLA-F-228ENST00000486194 OR6J1Q8NGC5 347 aa25.52■■□□□ 1.68
HLA-F-228ENST00000486194 TBC1D5Q92609 795 aa25.52■■□□□ 1.68
HLA-F-228ENST00000486194 TAAR1Q96RJ0 339 aa25.52■■□□□ 1.68
HLA-F-228ENST00000486194 MAP3K14Q99558 947 aa25.52■■□□□ 1.68
HLA-F-228ENST00000486194 TBX21Q9UL17 535 aa25.52■■□□□ 1.68
HLA-F-228ENST00000486194 SLC27A2O14975 620 aa25.51■■□□□ 1.67
HLA-F-228ENST00000486194 TIMP1P01033 207 aa25.51■■□□□ 1.67
HLA-F-228ENST00000486194 ITGB8P26012 769 aa25.51■■□□□ 1.67
HLA-F-228ENST00000486194 STXBP2Q15833 593 aa25.51■■□□□ 1.67
HLA-F-228ENST00000486194 TMEM63BQ5T3F8 832 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms