RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, human

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DOA-204	ENST00000485901	IGDCC4	Q8TDY8	1250 aa		13.99	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	MYLIP	Q8WY64	445 aa		13.99	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	PRDM6	Q9NQX0	595 aa		13.99	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	SYNRG	Q9UMZ2	1314 aa		13.98	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	PRC1	O43663	620 aa		13.98	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	PQBP1	O60828	265 aa	Known RBP	13.98	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	SNAI1	O95863	264 aa	Predicted RBP	13.98	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	PARP1	P09874	1014 aa	Known RBP	13.98	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	GJA9	P57773	515 aa		13.98	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	ASPRV1	Q53RT3	343 aa		13.98	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	RASGRP2	Q7LDG7	609 aa		13.98	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	TMEM87B	Q96K49	555 aa		13.98	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	NEK1	Q96PY6	1258 aa		13.98	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	UPF3A	Q9H1J1	476 aa	Known RBP	13.98	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	TBX21	Q9UL17	535 aa		13.98	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	PNMA2	Q9UL42	364 aa		13.98	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	RIPK3	Q9Y572	518 aa		13.98	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	MCM3AP	O60318	1980 aa		13.98	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	EIF5B	O60841	1220 aa	Known RBP	13.97	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	CABYR	O75952	493 aa		13.97	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	GOLGA8H	P0CJ92	632 aa		13.97	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	DNAJB2	P25686	324 aa		13.97	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	HSPA4	P34932	840 aa		13.97	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	ANTXR2	P58335	489 aa		13.97	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	ACVR2B	Q13705	512 aa		13.97	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	KCNA10	Q16322	511 aa		13.97	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	TKFC	Q3LXA3	575 aa		13.97	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	TJAP1	Q5JTD0	557 aa		13.97	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	RASIP1	Q5U651	963 aa		13.97	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	CATIP	Q7Z7H3	387 aa		13.97	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	TMEM199	Q8N511	208 aa		13.97	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	KCNB2	Q92953	911 aa		13.97	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	RANBP17	Q9H2T7	1088 aa	Known RBP	13.97	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	ZNF576	Q9H609	170 aa		13.97	□□□□□ -0.17
HLA-DOA-204	ENST00000485901		A0A0U1RQG5	324 aa	Predicted RBP	13.96	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	ARVCF	O00192	962 aa		13.96	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	TLR3	O15455	904 aa	Known RBP	13.96	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	ICAM1	P05362	532 aa		13.96	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	HMGB1	P09429	215 aa	Known RBP	13.96	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	TAL1	P17542	331 aa	Predicted RBP	13.96	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	SNAP25	P60880	206 aa		13.96	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.96	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	DHX32	Q7L7V1	743 aa	Known RBP	13.96	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	RASEF	Q8IZ41	740 aa		13.96	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.96	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	AGBL1	Q96MI9	1066 aa		13.96	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	UBA5	Q9GZZ9	404 aa		13.96	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	MTIF3	Q9H2K0	278 aa	Known RBP	13.96	□□□□□ -0.17
HLA-DOA-204	ENST00000485901	ZNF536	O15090	1300 aa		13.95	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	LIFR	P42702	1097 aa		13.95	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	EPHB4	P54760	987 aa		13.95	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	NFXL1	Q6ZNB6	911 aa		13.95	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	TIFA	Q96CG3	184 aa		13.95	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	TRERF1	Q96PN7	1200 aa		13.95	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	GAS2L1	Q99501	681 aa	Predicted RBP	13.95	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	USP26	Q9BXU7	913 aa		13.95	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	LY9	Q9HBG7	655 aa		13.95	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	SENP2	Q9HC62	589 aa		13.95	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.95	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	CCPG1	Q9ULG6	757 aa		13.95	□□□□□ -0.18
HLA-DOA-204	ENST00000485901		Q9Y3F1	56 aa		13.95	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	WDR19	Q8NEZ3	1342 aa		13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	PALM3	A6NDB9	673 aa	Predicted RBP	13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	CCDC69	A6NI79	296 aa		13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	KLRF2	D3W0D1	207 aa		13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	SH2B2	O14492	632 aa	Predicted RBP	13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	ASGR1	P07306	291 aa		13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	ALAS1	P13196	640 aa		13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	EXOSC10	Q01780	885 aa	Known RBP	13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	TROAP	Q12815	778 aa		13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	GRM4	Q14833	912 aa		13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	GRIN2C	Q14957	1233 aa		13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	RAB30	Q15771	203 aa		13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	ADCK5	Q3MIX3	580 aa		13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	TMEM240	Q5SV17	173 aa		13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	ADGRF4	Q8IZF3	695 aa		13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	ANKRD35	Q8N283	1001 aa		13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	MAP3K14	Q99558	947 aa		13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	ACAD9	Q9H845	621 aa		13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	HOMER2	Q9NSB8	354 aa		13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	RNF146	Q9NTX7	359 aa		13.94	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	LOC102724159	A0A0B4J2E5	919 aa		13.93	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	ASB14	A6NK59	587 aa		13.93	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	DHX16	O60231	1041 aa	Known RBP	13.93	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	CD4	P01730	458 aa		13.93	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	C6orf222	P0C671	652 aa	Predicted RBP	13.93	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	PSMA5	P28066	241 aa		13.93	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	PWP2	Q15269	919 aa	Known RBP	13.93	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	CCDC144B	Q3MJ40	725 aa		13.93	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	GNAS	Q5JWF2	1037 aa		13.93	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	SYNE3	Q6ZMZ3	975 aa		13.93	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	FAM126B	Q8IXS8	530 aa		13.93	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	STAG2	Q8N3U4	1231 aa		13.93	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	SLC43A3	Q8NBI5	491 aa		13.93	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	HERVK_113	Q902F9	699 aa		13.93	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	VAT1L	Q9HCJ6	419 aa		13.93	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	GPHN	Q9NQX3	736 aa	Predicted RBP	13.93	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	MAD2L2	Q9UI95	211 aa		13.93	□□□□□ -0.18
HLA-DOA-204	ENST00000485901	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms