RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 PRPF40AO75400 957 aaKnown RBP6.14□□□□□ -1.43
VPS8-223ENST00000485024 F13A1P00488 732 aa6.14□□□□□ -1.43
VPS8-223ENST00000485024 GLI4P10075 376 aa6.14□□□□□ -1.43
VPS8-223ENST00000485024 POLR2BP30876 1174 aaKnown RBP6.14□□□□□ -1.43
VPS8-223ENST00000485024 ARSHQ5FYA8 562 aa6.14□□□□□ -1.43
VPS8-223ENST00000485024 CCDC84Q86UT8 332 aaPredicted RBP6.14□□□□□ -1.43
VPS8-223ENST00000485024 CIR1Q86X95 450 aaPredicted RBP6.14□□□□□ -1.43
VPS8-223ENST00000485024 NAT16Q8N8M0 369 aa6.14□□□□□ -1.43
VPS8-223ENST00000485024 TXNDC5Q8NBS9 432 aaKnown RBP6.14□□□□□ -1.43
VPS8-223ENST00000485024 NPEPPSL1A6NEC2 478 aa6.13□□□□□ -1.43
VPS8-223ENST00000485024 KRTAP10-9P60411 292 aa6.13□□□□□ -1.43
VPS8-223ENST00000485024 KRTAP15-1Q3LI76 137 aa6.13□□□□□ -1.43
VPS8-223ENST00000485024 LRCH2Q5VUJ6 765 aa6.13□□□□□ -1.43
VPS8-223ENST00000485024 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.13□□□□□ -1.43
VPS8-223ENST00000485024 MRS2Q9HD23 443 aa6.13□□□□□ -1.43
VPS8-223ENST00000485024 TCAF1Q9Y4C2 921 aa6.13□□□□□ -1.43
VPS8-223ENST00000485024 TESMINQ9Y4I5 508 aa6.13□□□□□ -1.43
VPS8-223ENST00000485024 PATE3B3GLJ2 98 aa6.12□□□□□ -1.43
VPS8-223ENST00000485024 C8BP07358 591 aa6.12□□□□□ -1.43
VPS8-223ENST00000485024 ATXN1P54253 815 aaKnown RBP6.12□□□□□ -1.43
VPS8-223ENST00000485024 SURF1Q15526 300 aa6.12□□□□□ -1.43
VPS8-223ENST00000485024 GATAD2BQ8WXI9 593 aa6.12□□□□□ -1.43
VPS8-223ENST00000485024 FRMD6Q96NE9 622 aa6.12□□□□□ -1.43
VPS8-223ENST00000485024 SLC12A9Q9BXP2 914 aa6.12□□□□□ -1.43
VPS8-223ENST00000485024 DISP3Q9P2K9 1392 aa6.11□□□□□ -1.43
VPS8-223ENST00000485024 LDHBP07195 334 aaKnown RBP6.11□□□□□ -1.43
VPS8-223ENST00000485024 P4HBP07237 508 aaKnown RBP6.11□□□□□ -1.43
VPS8-223ENST00000485024 GSTM1P09488 218 aa6.11□□□□□ -1.43
VPS8-223ENST00000485024 RAG1P15918 1043 aa6.11□□□□□ -1.43
VPS8-223ENST00000485024 EIF4BP23588 611 aaKnown RBP6.11□□□□□ -1.43
VPS8-223ENST00000485024 LMO1P25800 156 aa6.11□□□□□ -1.43
VPS8-223ENST00000485024 DPTQ07507 201 aa6.11□□□□□ -1.43
VPS8-223ENST00000485024 FOXE3Q13461 319 aa6.11□□□□□ -1.43
VPS8-223ENST00000485024 DNAJC10Q8IXB1 793 aa6.11□□□□□ -1.43
VPS8-223ENST00000485024 C11orf84Q9BUA3 381 aaPredicted RBP6.11□□□□□ -1.43
VPS8-223ENST00000485024 FBLN5Q9UBX5 448 aa6.11□□□□□ -1.43
VPS8-223ENST00000485024 CORO7P57737 925 aa6.1□□□□□ -1.43
VPS8-223ENST00000485024 ABHD18Q0P651 414 aa6.1□□□□□ -1.43
VPS8-223ENST00000485024 MIIPQ5JXC2 388 aa6.1□□□□□ -1.43
VPS8-223ENST00000485024 AMER2Q8N7J2 671 aa6.1□□□□□ -1.43
VPS8-223ENST00000485024 C8orf37Q96NL8 207 aa6.1□□□□□ -1.43
VPS8-223ENST00000485024 SCAMP3O14828 347 aaKnown RBP6.09□□□□□ -1.43
VPS8-223ENST00000485024 SORBS3O60504 671 aa6.09□□□□□ -1.43
VPS8-223ENST00000485024 CYP2C8P10632 490 aa6.09□□□□□ -1.43
VPS8-223ENST00000485024 PRR31Q5SQ13 230 aa6.09□□□□□ -1.43
VPS8-223ENST00000485024 MEI1Q5TIA1 1274 aa6.09□□□□□ -1.43
VPS8-223ENST00000485024 VOPP1Q96AW1 172 aa6.09□□□□□ -1.43
VPS8-223ENST00000485024 LCORQ96JN0 433 aaPredicted RBP6.09□□□□□ -1.43
VPS8-223ENST00000485024 PTPN18Q99952 460 aa6.09□□□□□ -1.43
VPS8-223ENST00000485024 TRIM8Q9BZR9 551 aa6.09□□□□□ -1.43
VPS8-223ENST00000485024 NISCHQ9Y2I1 1504 aa6.09□□□□□ -1.44
VPS8-223ENST00000485024 F6X3S4 739 aa6.08□□□□□ -1.44
VPS8-223ENST00000485024 FGF10O15520 208 aaPredicted RBP6.08□□□□□ -1.44
VPS8-223ENST00000485024 ZNF202O95125 648 aa6.08□□□□□ -1.44
VPS8-223ENST00000485024 ZC3H6P61129 1189 aaKnown RBP6.08□□□□□ -1.44
VPS8-223ENST00000485024 PSMD2Q13200 908 aa6.08□□□□□ -1.44
VPS8-223ENST00000485024 CAMK2GQ13555 558 aaPredicted RBP6.08□□□□□ -1.44
VPS8-223ENST00000485024 CYP2R1Q6VVX0 501 aa6.08□□□□□ -1.44
VPS8-223ENST00000485024 TMC4Q7Z404 712 aa6.08□□□□□ -1.44
VPS8-223ENST00000485024 ZNF503Q96F45 646 aa6.08□□□□□ -1.44
VPS8-223ENST00000485024 SEMA4AQ9H3S1 761 aa6.08□□□□□ -1.44
VPS8-223ENST00000485024 ZFR2Q9UPR6 939 aaKnown RBP6.08□□□□□ -1.44
VPS8-223ENST00000485024 DDX3XO00571 662 aaKnown RBP eCLIP6.07□□□□□ -1.444e-7■■■□□ 17.9
VPS8-223ENST00000485024 ZNF623O75123 536 aa6.07□□□□□ -1.44
VPS8-223ENST00000485024 CLEC3AO75596 197 aa6.07□□□□□ -1.44
VPS8-223ENST00000485024 RECKO95980 971 aa6.07□□□□□ -1.44
VPS8-223ENST00000485024 EPHB4P54760 987 aa6.07□□□□□ -1.44
VPS8-223ENST00000485024 DAB2P98082 770 aa6.07□□□□□ -1.44
VPS8-223ENST00000485024 MRPL58Q14197 206 aaKnown RBP6.07□□□□□ -1.44
VPS8-223ENST00000485024 DIEXFQ68CQ4 756 aaKnown RBP6.07□□□□□ -1.44
VPS8-223ENST00000485024 PLEKHH3Q7Z736 793 aa6.07□□□□□ -1.44
VPS8-223ENST00000485024 KYQ8NBH2 561 aa6.07□□□□□ -1.44
VPS8-223ENST00000485024 NLGN2Q8NFZ4 835 aa6.07□□□□□ -1.44
VPS8-223ENST00000485024 USP33Q8TEY7 942 aa6.07□□□□□ -1.44
VPS8-223ENST00000485024 MBD6Q96DN6 1003 aa6.07□□□□□ -1.44
VPS8-223ENST00000485024 METTL5Q9NRN9 209 aaKnown RBP6.07□□□□□ -1.44
VPS8-223ENST00000485024 USP35Q9P2H5 1018 aa6.07□□□□□ -1.44
VPS8-223ENST00000485024 PARP2Q9UGN5 583 aa6.07□□□□□ -1.44
VPS8-223ENST00000485024 PCDHB12Q9Y5F1 795 aa6.07□□□□□ -1.44
VPS8-223ENST00000485024 NARSO43776 548 aaKnown RBP6.06□□□□□ -1.44
VPS8-223ENST00000485024 PF4P02776 101 aa6.06□□□□□ -1.44
VPS8-223ENST00000485024 GSNP06396 782 aa6.06□□□□□ -1.44
VPS8-223ENST00000485024 RLBP1P12271 317 aa6.06□□□□□ -1.44
VPS8-223ENST00000485024 IL12RB1P42701 662 aa6.06□□□□□ -1.44
VPS8-223ENST00000485024 LMNB2Q03252 620 aa6.06□□□□□ -1.44
VPS8-223ENST00000485024 RAD51AP2Q09MP3 1159 aa6.06□□□□□ -1.44
VPS8-223ENST00000485024 STK32CQ86UX6 486 aa6.06□□□□□ -1.44
VPS8-223ENST00000485024 SCUBE1Q8IWY4 988 aa6.06□□□□□ -1.44
VPS8-223ENST00000485024 Q8TCH9 128 aa6.06□□□□□ -1.44
VPS8-223ENST00000485024 DUSP9Q99956 384 aaKnown RBP6.06□□□□□ -1.44
VPS8-223ENST00000485024 FBXL21Q9UKT6 434 aa6.06□□□□□ -1.44
VPS8-223ENST00000485024 SHROOM4Q9ULL8 1493 aa6.06□□□□□ -1.44
VPS8-223ENST00000485024 GNA15P30679 374 aa6.05□□□□□ -1.44
VPS8-223ENST00000485024 TAGLNQ01995 201 aaKnown RBP6.05□□□□□ -1.44
VPS8-223ENST00000485024 SLC9A5Q14940 896 aa6.05□□□□□ -1.44
VPS8-223ENST00000485024 CDCP2Q5VXM1 449 aa6.05□□□□□ -1.44
VPS8-223ENST00000485024 RNF207Q6ZRF8 634 aa6.05□□□□□ -1.44
VPS8-223ENST00000485024 USP48Q86UV5 1035 aa6.05□□□□□ -1.44
VPS8-223ENST00000485024 FBXO27Q8NI29 283 aa6.05□□□□□ -1.44
VPS8-223ENST00000485024 SRRTQ9BXP5 876 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms