RNA–Protein interactions for RNA: ENST00000484476.5

LDLRAP1-205, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 1 (best)

Gene LDLRAP1, Length 657 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-205ENST00000484476 FGD4Q96M96 766 aa16.23■□□□□ 0.19
LDLRAP1-205ENST00000484476 SEZ6LQ9BYH1 1024 aa16.23■□□□□ 0.19
LDLRAP1-205ENST00000484476 UPF3AQ9H1J1 476 aaKnown RBP16.23■□□□□ 0.19
LDLRAP1-205ENST00000484476 GPHNQ9NQX3 736 aaPredicted RBP16.23■□□□□ 0.19
LDLRAP1-205ENST00000484476 KIF5BP33176 963 aa16.22■□□□□ 0.19
LDLRAP1-205ENST00000484476 SEC23AQ15436 765 aa16.22■□□□□ 0.19
LDLRAP1-205ENST00000484476 FBXO16Q8IX29 292 aaPredicted RBP16.22■□□□□ 0.19
LDLRAP1-205ENST00000484476 NSUN6Q8TEA1 469 aaKnown RBP16.22■□□□□ 0.19
LDLRAP1-205ENST00000484476 TOX2Q96NM4 488 aa16.22■□□□□ 0.19
LDLRAP1-205ENST00000484476 ESYT1Q9BSJ8 1104 aa16.22■□□□□ 0.19
LDLRAP1-205ENST00000484476 WDR11Q9BZH6 1224 aa16.22■□□□□ 0.19
LDLRAP1-205ENST00000484476 CPVLQ9H3G5 476 aa16.22■□□□□ 0.19
LDLRAP1-205ENST00000484476 JMJD4Q9H9V9 463 aa16.22■□□□□ 0.19
LDLRAP1-205ENST00000484476 PLXNA1Q9UIW2 1896 aa16.22■□□□□ 0.19
LDLRAP1-205ENST00000484476 A0A0U1RQG5 324 aaPredicted RBP16.21■□□□□ 0.19
LDLRAP1-205ENST00000484476 CCDC69A6NI79 296 aa16.21■□□□□ 0.19
LDLRAP1-205ENST00000484476 CPT1AP50416 773 aa16.21■□□□□ 0.19
LDLRAP1-205ENST00000484476 QRICH1Q2TAL8 776 aa16.21■□□□□ 0.19
LDLRAP1-205ENST00000484476 SLC30A10Q6XR72 485 aa16.21■□□□□ 0.19
LDLRAP1-205ENST00000484476 SYNE3Q6ZMZ3 975 aa16.21■□□□□ 0.19
LDLRAP1-205ENST00000484476 CTCFLQ8NI51 663 aaPredicted RBP16.21■□□□□ 0.19
LDLRAP1-205ENST00000484476 MORC4Q8TE76 937 aa16.21■□□□□ 0.19
LDLRAP1-205ENST00000484476 SCFD2Q8WU76 684 aa16.21■□□□□ 0.19
LDLRAP1-205ENST00000484476 MTA3Q9BTC8 594 aa16.21■□□□□ 0.19
LDLRAP1-205ENST00000484476 PCDHA1Q9Y5I3 950 aa16.21■□□□□ 0.19
LDLRAP1-205ENST00000484476 ZBTB5O15062 677 aa16.2■□□□□ 0.18
LDLRAP1-205ENST00000484476 NKRFO15226 690 aaKnown RBP eCLIP16.2■□□□□ 0.18
LDLRAP1-205ENST00000484476 SMPD1P17405 629 aa16.2■□□□□ 0.18
LDLRAP1-205ENST00000484476 GNAQP50148 359 aa16.2■□□□□ 0.18
LDLRAP1-205ENST00000484476 PPP2R5BQ15173 497 aa16.2■□□□□ 0.18
LDLRAP1-205ENST00000484476 DUSP28Q4G0W2 176 aa16.2■□□□□ 0.18
LDLRAP1-205ENST00000484476 ARHGEF16Q5VV41 709 aa16.2■□□□□ 0.18
LDLRAP1-205ENST00000484476 TAPT1Q6NXT6 567 aa16.2■□□□□ 0.18
LDLRAP1-205ENST00000484476 CHST3Q7LGC8 479 aa16.2■□□□□ 0.18
LDLRAP1-205ENST00000484476 ANKRD33Q7Z3H0 272 aa16.2■□□□□ 0.18
LDLRAP1-205ENST00000484476 PURBQ96QR8 312 aaKnown RBP16.2■□□□□ 0.18
LDLRAP1-205ENST00000484476 IWS1Q96ST2 819 aa16.2■□□□□ 0.18
LDLRAP1-205ENST00000484476 RMDN3Q96TC7 470 aa16.2■□□□□ 0.18
LDLRAP1-205ENST00000484476 LZTS2Q9BRK4 669 aa16.2■□□□□ 0.18
LDLRAP1-205ENST00000484476 KATNBL1Q9H079 304 aa16.2■□□□□ 0.18
LDLRAP1-205ENST00000484476 PDGFCQ9NRA1 345 aa16.2■□□□□ 0.18
LDLRAP1-205ENST00000484476 POLR3EQ9NVU0 708 aa16.2■□□□□ 0.18
LDLRAP1-205ENST00000484476 MAP3K20Q9NYL2 800 aaKnown RBP16.2■□□□□ 0.18
LDLRAP1-205ENST00000484476 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 PALM3A6NDB9 673 aaPredicted RBP16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 ARVCFO00192 962 aa16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 KPNA6O60684 536 aa16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 CFBP00751 764 aa16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 CALM1P0DP23 149 aa16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 CALM2P0DP24 149 aa16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 CALM3P0DP25 149 aa16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 BEX3Q00994 111 aa16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 TTLL4Q14679 1199 aa16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 GRM4Q14833 912 aa16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 STXBP2Q15833 593 aa16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 LRIT3Q3SXY7 679 aa16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 CCSAPQ6IQ19 270 aaPredicted RBP16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 HOMER1Q86YM7 354 aa16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 STAG2Q8N3U4 1231 aa16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 SAMD3Q8N6K7 520 aa16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 BADQ92934 168 aa16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 TMEM87BQ96K49 555 aa16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 PDLIM7Q9NR12 457 aa16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 SEC63Q9UGP8 760 aaKnown RBP16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 MAD2L2Q9UI95 211 aa16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 GNEQ9Y223 722 aaKnown RBP16.19■□□□□ 0.18
LDLRAP1-205ENST00000484476 MYADML2A6NDP7 307 aa16.18■□□□□ 0.18
LDLRAP1-205ENST00000484476 PRC1O43663 620 aa16.18■□□□□ 0.18
LDLRAP1-205ENST00000484476 CDC45O75419 566 aa16.18■□□□□ 0.18
LDLRAP1-205ENST00000484476 TXNP10599 105 aaKnown RBP16.18■□□□□ 0.18
LDLRAP1-205ENST00000484476 NKX3-2P78367 333 aa16.18■□□□□ 0.18
LDLRAP1-205ENST00000484476 CXCL17Q6UXB2 119 aa16.18■□□□□ 0.18
LDLRAP1-205ENST00000484476 OR6J1Q8NGC5 347 aa16.18■□□□□ 0.18
LDLRAP1-205ENST00000484476 SMCHD1A6NHR9 2005 aa16.18■□□□□ 0.18
LDLRAP1-205ENST00000484476 TRIOBPQ9H2D6 2365 aa16.18■□□□□ 0.18
LDLRAP1-205ENST00000484476 PNMA6FA0A0J9YX94 578 aa16.17■□□□□ 0.18
LDLRAP1-205ENST00000484476 SLC27A2O14975 620 aa16.17■□□□□ 0.18
LDLRAP1-205ENST00000484476 KIAA0355O15063 1070 aa16.17■□□□□ 0.18
LDLRAP1-205ENST00000484476 ADCY6O43306 1168 aa16.17■□□□□ 0.18
LDLRAP1-205ENST00000484476 EIF3JO75822 258 aaKnown RBP16.17■□□□□ 0.18
LDLRAP1-205ENST00000484476 DDAH1O94760 285 aa16.17■□□□□ 0.18
LDLRAP1-205ENST00000484476 CREB3L3Q68CJ9 461 aa16.17■□□□□ 0.18
LDLRAP1-205ENST00000484476 GPR153Q6NV75 609 aa16.17■□□□□ 0.18
LDLRAP1-205ENST00000484476 SYTL5Q8TDW5 730 aaPredicted RBP16.17■□□□□ 0.18
LDLRAP1-205ENST00000484476 IGDCC4Q8TDY8 1250 aa16.17■□□□□ 0.18
LDLRAP1-205ENST00000484476 RRP36Q96EU6 259 aaKnown RBP16.17■□□□□ 0.18
LDLRAP1-205ENST00000484476 MAP3K14Q99558 947 aa16.17■□□□□ 0.18
LDLRAP1-205ENST00000484476 LSG1Q9H089 658 aaKnown RBP16.17■□□□□ 0.18
LDLRAP1-205ENST00000484476 SLC12A7Q9Y666 1083 aa16.17■□□□□ 0.18
LDLRAP1-205ENST00000484476 LAMA4Q16363 1823 aa16.17■□□□□ 0.18
LDLRAP1-205ENST00000484476 ASTN1O14525 1302 aa16.17■□□□□ 0.18
LDLRAP1-205ENST00000484476 RBM47A0AV96 593 aaKnown RBP16.16■□□□□ 0.18
LDLRAP1-205ENST00000484476 GCOM1H8Y6P7 765 aaPredicted RBP16.16■□□□□ 0.18
LDLRAP1-205ENST00000484476 MYL3P08590 195 aa16.16■□□□□ 0.18
LDLRAP1-205ENST00000484476 POLR2MP0CAP2 368 aa16.16■□□□□ 0.18
LDLRAP1-205ENST00000484476 FGD1P98174 961 aa16.16■□□□□ 0.18
LDLRAP1-205ENST00000484476 FPGSQ05932 587 aa16.16■□□□□ 0.18
LDLRAP1-205ENST00000484476 FAAP100Q0VG06 881 aa16.16■□□□□ 0.18
LDLRAP1-205ENST00000484476 TROAPQ12815 778 aa16.16■□□□□ 0.18
LDLRAP1-205ENST00000484476 ITGA7Q13683 1181 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms