RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 PMEPA1Q969W9 287 aa7.58□□□□□ -1.2
SEMA3D-204ENST00000484038 TMEM39BQ9GZU3 492 aa7.58□□□□□ -1.2
SEMA3D-204ENST00000484038 ZNF70Q9UC06 446 aaPredicted RBP7.58□□□□□ -1.2
SEMA3D-204ENST00000484038 TTF2Q9UNY4 1162 aaKnown RBP7.58□□□□□ -1.2
SEMA3D-204ENST00000484038 PATL2C9JE40 543 aaKnown RBP7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 WDHD1O75717 1129 aaPredicted RBP7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 SPATA31C1P0DKV0 1188 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 TNNI2P48788 182 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 KIF22Q14807 665 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 ECM1Q16610 540 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 GPAT2Q6NUI2 795 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 LINS1Q8NG48 757 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 ARHGAP39Q9C0H5 1083 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 RASSF4Q9H2L5 321 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 CNNM1Q9NRU3 951 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 TRIM33Q9UPN9 1127 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 KIAA0100Q14667 2235 aaKnown RBP7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 EREGO14944 169 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 KIF4AO95239 1232 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 GYG1P46976 350 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 CACNB3P54284 484 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 FOXO4P98177 505 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 CCDC57Q2TAC2 916 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 LMBR1LQ6UX01 489 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 LDHAL6AQ6ZMR3 332 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 DZIP1LQ8IYY4 767 aaKnown RBP7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 TEPSINQ96N21 525 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 LACRTQ9GZZ8 138 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 CHRDQ9H2X0 955 aa7.57□□□□□ -1.2
SEMA3D-204ENST00000484038 FAM205AQ6ZU69 1335 aa7.56□□□□□ -1.2
SEMA3D-204ENST00000484038 SZT2Q5T011 3432 aa7.56□□□□□ -1.2
SEMA3D-204ENST00000484038 A0A0A0MRY4 1105 aa7.56□□□□□ -1.2
SEMA3D-204ENST00000484038 KRBA1A5PL33 1030 aa7.56□□□□□ -1.2
SEMA3D-204ENST00000484038 TLR2O60603 784 aa7.56□□□□□ -1.2
SEMA3D-204ENST00000484038 CETPP11597 493 aa7.56□□□□□ -1.2
SEMA3D-204ENST00000484038 MAPK1P28482 360 aa7.56□□□□□ -1.2
SEMA3D-204ENST00000484038 CRKP46108 304 aa7.56□□□□□ -1.2
SEMA3D-204ENST00000484038 LACTBP83111 547 aaPredicted RBP7.56□□□□□ -1.2
SEMA3D-204ENST00000484038 GRIK5Q16478 980 aa7.56□□□□□ -1.2
SEMA3D-204ENST00000484038 PLA2G4EQ3MJ16 856 aa7.56□□□□□ -1.2
SEMA3D-204ENST00000484038 IL22RA1Q8N6P7 574 aa7.56□□□□□ -1.2
SEMA3D-204ENST00000484038 TTC9Q92623 222 aa7.56□□□□□ -1.2
SEMA3D-204ENST00000484038 DPF3Q92784 378 aa7.56□□□□□ -1.2
SEMA3D-204ENST00000484038 WRNIP1Q96S55 665 aa7.56□□□□□ -1.2
SEMA3D-204ENST00000484038 PRKRIP1Q9H875 184 aaPredicted RBP7.56□□□□□ -1.2
SEMA3D-204ENST00000484038 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.56□□□□□ -1.2
SEMA3D-204ENST00000484038 BTBD19C9JJ37 291 aa7.55□□□□□ -1.2
SEMA3D-204ENST00000484038 F6X3S4 739 aa7.55□□□□□ -1.2
SEMA3D-204ENST00000484038 FRAT2O75474 233 aaPredicted RBP7.55□□□□□ -1.2
SEMA3D-204ENST00000484038 ACPPP15309 386 aa7.55□□□□□ -1.2
SEMA3D-204ENST00000484038 HIBADHP31937 336 aaKnown RBP7.55□□□□□ -1.2
SEMA3D-204ENST00000484038 CHAF1AQ13111 956 aaPredicted RBP7.55□□□□□ -1.2
SEMA3D-204ENST00000484038 SNAPC2Q13487 334 aa7.55□□□□□ -1.2
SEMA3D-204ENST00000484038 EPHA10Q5JZY3 1008 aa7.55□□□□□ -1.2
SEMA3D-204ENST00000484038 VPS37DQ86XT2 251 aa7.55□□□□□ -1.2
SEMA3D-204ENST00000484038 TDRD7Q8NHU6 1098 aaKnown RBP7.55□□□□□ -1.2
SEMA3D-204ENST00000484038 ZKSCAN4Q969J2 545 aaPredicted RBP7.55□□□□□ -1.2
SEMA3D-204ENST00000484038 PBX4Q9BYU1 374 aa7.55□□□□□ -1.2
SEMA3D-204ENST00000484038 SALL4Q9UJQ4 1053 aa7.55□□□□□ -1.2
SEMA3D-204ENST00000484038 SNCAIPQ9Y6H5 919 aa7.55□□□□□ -1.2
SEMA3D-204ENST00000484038 POLR3DP05423 398 aaPredicted RBP7.54□□□□□ -1.2
SEMA3D-204ENST00000484038 NEFLP07196 543 aa7.54□□□□□ -1.2
SEMA3D-204ENST00000484038 EDN3P14138 238 aa7.54□□□□□ -1.2
SEMA3D-204ENST00000484038 CDC25BP30305 580 aa7.54□□□□□ -1.2
SEMA3D-204ENST00000484038 GRIK4Q16099 956 aa7.54□□□□□ -1.2
SEMA3D-204ENST00000484038 ERO1BQ86YB8 467 aa7.54□□□□□ -1.2
SEMA3D-204ENST00000484038 CEP120Q8N960 986 aa7.54□□□□□ -1.2
SEMA3D-204ENST00000484038 RAET1EQ8TD07 263 aa7.54□□□□□ -1.2
SEMA3D-204ENST00000484038 TEKT1Q969V4 418 aa7.54□□□□□ -1.2
SEMA3D-204ENST00000484038 SHISA4Q96DD7 197 aa7.54□□□□□ -1.2
SEMA3D-204ENST00000484038 ZCCHC17Q9NP64 241 aaKnown RBP7.54□□□□□ -1.2
SEMA3D-204ENST00000484038 TMOD2Q9NZR1 351 aa7.54□□□□□ -1.2
SEMA3D-204ENST00000484038 CPA4Q9UI42 421 aa7.54□□□□□ -1.2
SEMA3D-204ENST00000484038 DCTN4Q9UJW0 460 aa7.54□□□□□ -1.2
SEMA3D-204ENST00000484038 FANCIQ9NVI1 1328 aa7.54□□□□□ -1.2
SEMA3D-204ENST00000484038 GRM8O00222 908 aa7.53□□□□□ -1.2
SEMA3D-204ENST00000484038 PSMC4P43686 418 aa7.53□□□□□ -1.2
SEMA3D-204ENST00000484038 RANBP2P49792 3224 aaKnown RBP7.53□□□□□ -1.2
SEMA3D-204ENST00000484038 PRMT2P55345 433 aa7.53□□□□□ -1.2
SEMA3D-204ENST00000484038 UBE4AQ14139 1066 aa7.53□□□□□ -1.2
SEMA3D-204ENST00000484038 BEND3Q5T5X7 828 aa7.53□□□□□ -1.2
SEMA3D-204ENST00000484038 FMR1NBQ8N0W7 255 aaPredicted RBP7.53□□□□□ -1.2
SEMA3D-204ENST00000484038 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.53□□□□□ -1.2
SEMA3D-204ENST00000484038 FAM84BQ96KN1 310 aaPredicted RBP7.53□□□□□ -1.2
SEMA3D-204ENST00000484038 CITED4Q96RK1 184 aa7.53□□□□□ -1.2
SEMA3D-204ENST00000484038 NIF3L1Q9GZT8 377 aa7.53□□□□□ -1.2
SEMA3D-204ENST00000484038 C9orf78Q9NZ63 289 aaPredicted RBP7.53□□□□□ -1.2
SEMA3D-204ENST00000484038 PTPRAP18433 802 aa7.52□□□□□ -1.2
SEMA3D-204ENST00000484038 CTGFP29279 349 aa7.52□□□□□ -1.2
SEMA3D-204ENST00000484038 GRK4P32298 578 aa7.52□□□□□ -1.2
SEMA3D-204ENST00000484038 PPIL2Q13356 520 aa7.52□□□□□ -1.2
SEMA3D-204ENST00000484038 ORC1Q13415 861 aa7.52□□□□□ -1.2
SEMA3D-204ENST00000484038 CCDC27Q2M243 656 aa7.52□□□□□ -1.2
SEMA3D-204ENST00000484038 DCAF15Q66K64 600 aa7.52□□□□□ -1.2
SEMA3D-204ENST00000484038 SLC4A10Q6U841 1118 aa7.52□□□□□ -1.2
SEMA3D-204ENST00000484038 MIGA2Q7L4E1 593 aa7.52□□□□□ -1.2
SEMA3D-204ENST00000484038 TBC1D22AQ8WUA7 517 aa7.52□□□□□ -1.2
SEMA3D-204ENST00000484038 HOOK2Q96ED9 719 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms