RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 TNFRSF25Q93038 417 aa6.2□□□□□ -1.42
COL17A1-206ENST00000483876 CEP95Q96GE4 821 aa6.2□□□□□ -1.42
COL17A1-206ENST00000483876 ZBED3Q96IU2 234 aaPredicted RBP6.2□□□□□ -1.42
COL17A1-206ENST00000483876 PRMT6Q96LA8 375 aaPredicted RBP6.2□□□□□ -1.42
COL17A1-206ENST00000483876 AIFM3Q96NN9 605 aa6.2□□□□□ -1.42
COL17A1-206ENST00000483876 FUCA2Q9BTY2 467 aa6.2□□□□□ -1.42
COL17A1-206ENST00000483876 NUP62CLQ9H1M0 184 aa6.2□□□□□ -1.42
COL17A1-206ENST00000483876 RIOX1Q9H6W3 641 aa6.2□□□□□ -1.42
COL17A1-206ENST00000483876 GJB4Q9NTQ9 266 aa6.2□□□□□ -1.42
COL17A1-206ENST00000483876 DACT1Q9NYF0 836 aa6.2□□□□□ -1.42
COL17A1-206ENST00000483876 TMOD2Q9NZR1 351 aa6.2□□□□□ -1.42
COL17A1-206ENST00000483876 FAM198AQ9UFP1 575 aa6.2□□□□□ -1.42
COL17A1-206ENST00000483876 PRKAG2Q9UGJ0 569 aa6.2□□□□□ -1.42
COL17A1-206ENST00000483876 HERC5Q9UII4 1024 aaKnown RBP6.2□□□□□ -1.42
COL17A1-206ENST00000483876 NOL7Q9UMY1 257 aaKnown RBP6.2□□□□□ -1.42
COL17A1-206ENST00000483876 GABRQQ9UN88 632 aa6.2□□□□□ -1.42
COL17A1-206ENST00000483876 STX8Q9UNK0 236 aa6.2□□□□□ -1.42
COL17A1-206ENST00000483876 CLIC4Q9Y696 253 aa6.2□□□□□ -1.42
COL17A1-206ENST00000483876 CNTNAP5Q8WYK1 1306 aa6.2□□□□□ -1.42
COL17A1-206ENST00000483876 FOCADQ5VW36 1801 aa6.2□□□□□ -1.42
COL17A1-206ENST00000483876 CHD8Q9HCK8 2581 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 ESYT2A0FGR8 921 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 DDTLA6NHG4 134 aaPredicted RBP6.19□□□□□ -1.42
COL17A1-206ENST00000483876 GFRA3O60609 400 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 IGFBP4P22692 258 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 PTPREP23469 700 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 GNA11P29992 359 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 FCGRTP55899 365 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 CEBPZQ03701 1054 aaKnown RBP6.19□□□□□ -1.42
COL17A1-206ENST00000483876 NFIAQ12857 509 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 PICALMQ13492 652 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 DLGAP5Q15398 846 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 NPY5RQ15761 445 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 CERKLQ49MI3 558 aaPredicted RBP6.19□□□□□ -1.42
COL17A1-206ENST00000483876 GPATCH4Q5T3I0 446 aaKnown RBP6.19□□□□□ -1.42
COL17A1-206ENST00000483876 TMEM179Q6ZVK1 233 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 FMR1NBQ8N0W7 255 aaPredicted RBP6.19□□□□□ -1.42
COL17A1-206ENST00000483876 CMTR1Q8N1G2 835 aaKnown RBP6.19□□□□□ -1.42
COL17A1-206ENST00000483876 KRI1Q8N9T8 703 aaKnown RBP6.19□□□□□ -1.42
COL17A1-206ENST00000483876 MRPS27Q92552 414 aaKnown RBP6.19□□□□□ -1.42
COL17A1-206ENST00000483876 FERMT2Q96AC1 680 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 PPP1R9BQ96SB3 815 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 ZMYND12Q9H0C1 365 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 GLT8D2Q9H1C3 349 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 RBSNQ9H1K0 784 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 DEFB129Q9H1M3 183 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 TNMDQ9H2S6 317 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 TDRD3Q9H7E2 651 aaKnown RBP6.19□□□□□ -1.42
COL17A1-206ENST00000483876 ZCCHC17Q9NP64 241 aaKnown RBP6.19□□□□□ -1.42
COL17A1-206ENST00000483876 CABP5Q9NP86 173 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 GINM1Q9NU53 330 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 BARHL2Q9NY43 387 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 KCNJ14Q9UNX9 436 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 HPSEQ9Y251 543 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 SRPRBQ9Y5M8 271 aaKnown RBP6.19□□□□□ -1.42
COL17A1-206ENST00000483876 DDX60LQ5H9U9 1706 aaKnown RBP6.19□□□□□ -1.42
COL17A1-206ENST00000483876 MYH1P12882 1939 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 CACNA1BQ00975 2339 aa6.19□□□□□ -1.42
COL17A1-206ENST00000483876 NAV1Q8NEY1 1877 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 CDK5RAP2Q96SN8 1893 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 TRIM75PA6NK02 468 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 BTBD19C9JJ37 291 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 M0R2N6 131 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 LAD1O00515 517 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 CYTH3O43739 400 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 MYO1BO43795 1136 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 KINO60870 393 aaKnown RBP6.18□□□□□ -1.42
COL17A1-206ENST00000483876 NR1I2O75469 434 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 USP2O75604 605 aaPredicted RBP6.18□□□□□ -1.42
COL17A1-206ENST00000483876 PDHBP11177 359 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 AKR1B1P15121 316 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 DNAJB2P25686 324 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 FLT3LGP49771 235 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 NLRP5P59047 1200 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 ZNF543Q08ER8 600 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 CCDC173Q0VFZ6 552 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 TRAF1Q13077 416 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 ORC2Q13416 577 aaPredicted RBP6.18□□□□□ -1.42
COL17A1-206ENST00000483876 SUPT20HL1Q3ZLR7 823 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 SPDYE2Q495Y8 402 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 HS1BP3Q53T59 392 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 RESP18Q5W5W9 173 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 ARL6IP4Q66PJ3 421 aaKnown RBP6.18□□□□□ -1.42
COL17A1-206ENST00000483876 KANK3Q6NY19 840 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 SH3BP5LQ7L8J4 393 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 ZFPM1Q8IX07 1006 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 BLIDQ8IZY5 108 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 STAG2Q8N3U4 1231 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 GMCL1P1Q8NEA9 526 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 DCAF4Q8WV16 495 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 MTMR8Q96EF0 704 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 RRP36Q96EU6 259 aaKnown RBP6.18□□□□□ -1.42
COL17A1-206ENST00000483876 PYM1Q9BRP8 204 aaKnown RBP6.18□□□□□ -1.42
COL17A1-206ENST00000483876 TRIM34Q9BYJ4 488 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 PRDM12Q9H4Q4 367 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 C6orf50Q9HD87 102 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 VPS54Q9P1Q0 977 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 ZNF70Q9UC06 446 aaPredicted RBP6.18□□□□□ -1.42
COL17A1-206ENST00000483876 CLIP2Q9UDT6 1046 aa6.18□□□□□ -1.42
COL17A1-206ENST00000483876 PCDHA4Q9UN74 947 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms