RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 PLA2G6O60733 806 aa13.42□□□□□ -0.26
SND1-210ENST00000483503 ATP1A3P13637 1013 aa13.42□□□□□ -0.26
SND1-210ENST00000483503 PLCG1P19174 1290 aa13.42□□□□□ -0.26
SND1-210ENST00000483503 TECP42680 631 aa13.42□□□□□ -0.26
SND1-210ENST00000483503 TXKP42681 527 aa13.42□□□□□ -0.26
SND1-210ENST00000483503 MAP3K10Q02779 954 aa13.42□□□□□ -0.26
SND1-210ENST00000483503 FMR1Q06787 632 aaKnown RBP eCLIP13.42□□□□□ -0.262e-7■□□□□ 9.4
SND1-210ENST00000483503 UBE2SQ16763 222 aa13.42□□□□□ -0.26
SND1-210ENST00000483503 KRT79Q5XKE5 535 aa13.42□□□□□ -0.26
SND1-210ENST00000483503 FAM160B2Q86V87 743 aa13.42□□□□□ -0.26
SND1-210ENST00000483503 VSTM4Q8IW00 320 aa13.42□□□□□ -0.26
SND1-210ENST00000483503 CCDC112Q8NEF3 446 aa13.42□□□□□ -0.26
SND1-210ENST00000483503 C7orf25Q9BPX7 421 aa13.42□□□□□ -0.26
SND1-210ENST00000483503 MYOZ2Q9NPC6 264 aa13.42□□□□□ -0.26
SND1-210ENST00000483503 DDX25Q9UHL0 483 aaKnown RBP13.42□□□□□ -0.26
SND1-210ENST00000483503 FER1L6Q2WGJ9 1857 aa13.42□□□□□ -0.26
SND1-210ENST00000483503 COL4A5P29400 1685 aa13.41□□□□□ -0.26
SND1-210ENST00000483503 CYP3A7-CYP3A51PA0A087WV96 503 aa13.41□□□□□ -0.26
SND1-210ENST00000483503 RHOBTB3O94955 611 aa13.41□□□□□ -0.26
SND1-210ENST00000483503 ASNSP08243 561 aa13.41□□□□□ -0.26
SND1-210ENST00000483503 SLURP2P0DP57 97 aa13.41□□□□□ -0.26
SND1-210ENST00000483503 SKILP12757 684 aa13.41□□□□□ -0.26
SND1-210ENST00000483503 CYP3A7P24462 503 aa13.41□□□□□ -0.26
SND1-210ENST00000483503 KCNJ6P48051 423 aa13.41□□□□□ -0.26
SND1-210ENST00000483503 STAT2P52630 851 aa13.41□□□□□ -0.26
SND1-210ENST00000483503 ZNF280AP59817 542 aaPredicted RBP13.41□□□□□ -0.26
SND1-210ENST00000483503 PAK1Q13153 545 aa13.41□□□□□ -0.26
SND1-210ENST00000483503 NAALADL2Q58DX5 795 aa13.41□□□□□ -0.26
SND1-210ENST00000483503 SV2BQ7L1I2 683 aa13.41□□□□□ -0.26
SND1-210ENST00000483503 SLFN12Q8IYM2 578 aa13.41□□□□□ -0.26
SND1-210ENST00000483503 MTRQ99707 1265 aa13.41□□□□□ -0.26
SND1-210ENST00000483503 ANO3Q9BYT9 981 aa13.41□□□□□ -0.26
SND1-210ENST00000483503 BLZF1Q9H2G9 400 aa13.41□□□□□ -0.26
SND1-210ENST00000483503 EHMT1Q9H9B1 1298 aa13.41□□□□□ -0.26
SND1-210ENST00000483503 KDM3AQ9Y4C1 1321 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 SPDYE3A6NKU9 549 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 PP2D1A8MPX8 630 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 TBX3O15119 743 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 CCP110O43303 1012 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 TDP2O95551 362 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 TPM2P07951 284 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 CDC25AP30304 524 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 CAP2P40123 477 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 LRMPQ12912 555 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 SHROOM1Q2M3G4 852 aaPredicted RBP13.4□□□□□ -0.26
SND1-210ENST00000483503 CDKAL1Q5VV42 579 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 KLHL10Q6JEL2 608 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 NOC3LQ8WTT2 800 aaKnown RBP13.4□□□□□ -0.26
SND1-210ENST00000483503 STAMQ92783 540 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 DPF2Q92785 391 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 HOOK2Q96ED9 719 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 MBOAT7Q96N66 472 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 NT5C3AQ9H0P0 336 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 VCPKMTQ9H867 229 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 KCND1Q9NSA2 647 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 EXOC1Q9NV70 894 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 FEM1BQ9UK73 627 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 CTNND2Q9UQB3 1225 aa13.4□□□□□ -0.26
SND1-210ENST00000483503 A0A1W2PRG0 241 aa13.39□□□□□ -0.27
SND1-210ENST00000483503 H7C1D1 291 aa13.39□□□□□ -0.27
SND1-210ENST00000483503 WNT10BO00744 389 aa13.39□□□□□ -0.27
SND1-210ENST00000483503 PSMA7O14818 248 aa13.39□□□□□ -0.27
SND1-210ENST00000483503 SLC37A4O43826 429 aa13.39□□□□□ -0.27
SND1-210ENST00000483503 CD44P16070 742 aaKnown RBP13.39□□□□□ -0.27
SND1-210ENST00000483503 CASP1P29466 404 aa13.39□□□□□ -0.27
SND1-210ENST00000483503 JAG1P78504 1218 aa13.39□□□□□ -0.27
SND1-210ENST00000483503 RRP1BQ14684 758 aaKnown RBP13.39□□□□□ -0.27
SND1-210ENST00000483503 KMT5BQ4FZB7 885 aa13.39□□□□□ -0.27
SND1-210ENST00000483503 CNNM4Q6P4Q7 775 aa13.39□□□□□ -0.27
SND1-210ENST00000483503 TRMT44Q8IYL2 757 aaKnown RBP13.39□□□□□ -0.27
SND1-210ENST00000483503 SNX29Q8TEQ0 813 aa13.39□□□□□ -0.27
SND1-210ENST00000483503 NELFBQ8WX92 580 aa13.39□□□□□ -0.27
SND1-210ENST00000483503 DHTKD1Q96HY7 919 aaPredicted RBP13.39□□□□□ -0.27
SND1-210ENST00000483503 PRIMPOLQ96LW4 560 aa13.39□□□□□ -0.27
SND1-210ENST00000483503 TMEM39BQ9GZU3 492 aa13.39□□□□□ -0.27
SND1-210ENST00000483503 PRR12Q9ULL5 1215 aa13.39□□□□□ -0.27
SND1-210ENST00000483503 BRCA1P38398 1863 aaKnown RBP13.38□□□□□ -0.27
SND1-210ENST00000483503 A0A1B0GTH6 734 aa13.38□□□□□ -0.27
SND1-210ENST00000483503 PVALEFA0A1B0GWK0 134 aa13.38□□□□□ -0.27
SND1-210ENST00000483503 BICDL2A1A5D9 508 aa13.38□□□□□ -0.27
SND1-210ENST00000483503 KIF2AO00139 706 aaPredicted RBP13.38□□□□□ -0.27
SND1-210ENST00000483503 NFKBIEO00221 500 aa13.38□□□□□ -0.27
SND1-210ENST00000483503 PIK3CDO00329 1044 aa13.38□□□□□ -0.27
SND1-210ENST00000483503 MEIS2O14770 477 aa13.38□□□□□ -0.27
SND1-210ENST00000483503 ASIC1P78348 528 aa13.38□□□□□ -0.27
SND1-210ENST00000483503 CCZ1BP86790 482 aa13.38□□□□□ -0.27
SND1-210ENST00000483503 CCZ1P86791 482 aaPredicted RBP13.38□□□□□ -0.27
SND1-210ENST00000483503 Q4G0T1 1027 aa13.38□□□□□ -0.27
SND1-210ENST00000483503 COBLL1Q53SF7 1204 aa13.38□□□□□ -0.27
SND1-210ENST00000483503 SPECC1LQ69YQ0 1117 aa13.38□□□□□ -0.27
SND1-210ENST00000483503 ADSSL1Q8N142 457 aa13.38□□□□□ -0.27
SND1-210ENST00000483503 GIMAP8Q8ND71 665 aaPredicted RBP13.38□□□□□ -0.27
SND1-210ENST00000483503 ERMNQ8TAM6 284 aa13.38□□□□□ -0.27
SND1-210ENST00000483503 NUP88Q99567 741 aaPredicted RBP13.38□□□□□ -0.27
SND1-210ENST00000483503 MMTAG2Q9BU76 263 aaKnown RBP13.38□□□□□ -0.27
SND1-210ENST00000483503 TRIM9Q9C026 710 aa13.38□□□□□ -0.27
SND1-210ENST00000483503 SAMSN1Q9NSI8 373 aaKnown RBP13.38□□□□□ -0.27
SND1-210ENST00000483503 LIMA1Q9UHB6 759 aaKnown RBP13.38□□□□□ -0.27
SND1-210ENST00000483503 PGAP2Q9UHJ9 254 aa13.38□□□□□ -0.27
SND1-210ENST00000483503 PCDHA12Q9UN75 941 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms