RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 ZNF713Q8N859 430 aaPredicted RBP20.53■□□□□ 0.88
CPNE1-224ENST00000483359 SMARCC2Q8TAQ2 1214 aa20.53■□□□□ 0.88
CPNE1-224ENST00000483359 RAET1EQ8TD07 263 aa20.53■□□□□ 0.88
CPNE1-224ENST00000483359 LCTP09848 1927 aa20.52■□□□□ 0.88
CPNE1-224ENST00000483359 POTEB2H3BUK9 544 aa20.52■□□□□ 0.88
CPNE1-224ENST00000483359 USP17L6PQ6QN14 398 aa20.52■□□□□ 0.88
CPNE1-224ENST00000483359 NPLOC4Q8TAT6 608 aa20.52■□□□□ 0.88
CPNE1-224ENST00000483359 ALG1Q9BT22 464 aa20.52■□□□□ 0.88
CPNE1-224ENST00000483359 PRDM10Q9NQV6 1147 aa20.52■□□□□ 0.88
CPNE1-224ENST00000483359 PTCH2Q9Y6C5 1203 aa20.52■□□□□ 0.88
CPNE1-224ENST00000483359 PLXNA1Q9UIW2 1896 aa20.52■□□□□ 0.88
CPNE1-224ENST00000483359 SMCO2A6NFE2 343 aa20.52■□□□□ 0.87
CPNE1-224ENST00000483359 CCL14Q16627 93 aa20.52■□□□□ 0.87
CPNE1-224ENST00000483359 UBE2SQ16763 222 aa20.52■□□□□ 0.87
CPNE1-224ENST00000483359 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.52■□□□□ 0.873e-8■□□□□ 9.3
CPNE1-224ENST00000483359 USP6NLQ92738 828 aa20.52■□□□□ 0.87
CPNE1-224ENST00000483359 APBA2Q99767 749 aa20.52■□□□□ 0.87
CPNE1-224ENST00000483359 PSTPIP2Q9H939 334 aa20.52■□□□□ 0.87
CPNE1-224ENST00000483359 COL20A1Q9P218 1284 aa20.52■□□□□ 0.87
CPNE1-224ENST00000483359 PPP1R18Q6NYC8 613 aa20.51■□□□□ 0.87
CPNE1-224ENST00000483359 DNAJC25-GNG10A0A024R161 153 aa20.5■□□□□ 0.87
CPNE1-224ENST00000483359 GCOM1H8Y6P7 765 aaPredicted RBP20.5■□□□□ 0.87
CPNE1-224ENST00000483359 POLR2MP0CAP2 368 aa20.5■□□□□ 0.87
CPNE1-224ENST00000483359 ELNP15502 786 aa20.5■□□□□ 0.87
CPNE1-224ENST00000483359 FCHSD1Q86WN1 690 aa20.5■□□□□ 0.87
CPNE1-224ENST00000483359 FAM184AQ8NB25 1140 aa20.5■□□□□ 0.87
CPNE1-224ENST00000483359 CCDC12Q8WUD4 166 aaPredicted RBP20.5■□□□□ 0.87
CPNE1-224ENST00000483359 CUL5Q93034 780 aa20.5■□□□□ 0.87
CPNE1-224ENST00000483359 KCNJ14Q9UNX9 436 aa20.5■□□□□ 0.87
CPNE1-224ENST00000483359 PTPN22Q9Y2R2 807 aa20.5■□□□□ 0.87
CPNE1-224ENST00000483359 DDX49Q9Y6V7 483 aaKnown RBP20.5■□□□□ 0.87
CPNE1-224ENST00000483359 ADCY7P51828 1080 aa20.5■□□□□ 0.87
CPNE1-224ENST00000483359 HMGN5P82970 282 aaKnown RBP20.5■□□□□ 0.87
CPNE1-224ENST00000483359 CUL4AQ13619 759 aa20.5■□□□□ 0.87
CPNE1-224ENST00000483359 CCDC148Q8NFR7 591 aa20.5■□□□□ 0.87
CPNE1-224ENST00000483359 SYTL5Q8TDW5 730 aaPredicted RBP20.5■□□□□ 0.87
CPNE1-224ENST00000483359 WASF1Q92558 559 aa20.5■□□□□ 0.87
CPNE1-224ENST00000483359 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.5■□□□□ 0.87
CPNE1-224ENST00000483359 ASTN1O14525 1302 aa20.49■□□□□ 0.87
CPNE1-224ENST00000483359 ADAMTS3O15072 1205 aa20.49■□□□□ 0.87
CPNE1-224ENST00000483359 GJB2P29033 226 aa20.49■□□□□ 0.87
CPNE1-224ENST00000483359 HSD17B4P51659 736 aa20.49■□□□□ 0.87
CPNE1-224ENST00000483359 NLRP5P59047 1200 aa20.49■□□□□ 0.87
CPNE1-224ENST00000483359 ZNF792Q3KQV3 632 aa20.49■□□□□ 0.87
CPNE1-224ENST00000483359 FAM133AQ8N9E0 248 aa20.49■□□□□ 0.87
CPNE1-224ENST00000483359 MAML3Q96JK9 1138 aa20.49■□□□□ 0.87
CPNE1-224ENST00000483359 SLC5A4Q9NY91 659 aa20.49■□□□□ 0.87
CPNE1-224ENST00000483359 FLRT1Q9NZU1 646 aa20.49■□□□□ 0.87
CPNE1-224ENST00000483359 SMC3Q9UQE7 1217 aa20.49■□□□□ 0.87
CPNE1-224ENST00000483359 MEIS2O14770 477 aa20.48■□□□□ 0.87
CPNE1-224ENST00000483359 SPRYD3Q8NCJ5 442 aa20.48■□□□□ 0.87
CPNE1-224ENST00000483359 RGS22Q8NE09 1264 aa20.48■□□□□ 0.87
CPNE1-224ENST00000483359 TRIB2Q92519 343 aa20.48■□□□□ 0.87
CPNE1-224ENST00000483359 FGD4Q96M96 766 aa20.48■□□□□ 0.87
CPNE1-224ENST00000483359 SOWAHBA6NEL2 793 aa20.48■□□□□ 0.87
CPNE1-224ENST00000483359 ADCY3O60266 1144 aa20.48■□□□□ 0.87
CPNE1-224ENST00000483359 PRMT2P55345 433 aa20.48■□□□□ 0.87
CPNE1-224ENST00000483359 GUCY1B3Q02153 619 aa20.48■□□□□ 0.87
CPNE1-224ENST00000483359 PGBD1Q96JS3 809 aa20.48■□□□□ 0.87
CPNE1-224ENST00000483359 TAAR1Q96RJ0 339 aa20.48■□□□□ 0.87
CPNE1-224ENST00000483359 ZMYND12Q9H0C1 365 aa20.48■□□□□ 0.87
CPNE1-224ENST00000483359 C6orf50Q9HD87 102 aa20.48■□□□□ 0.87
CPNE1-224ENST00000483359 RIC8AQ9NPQ8 531 aa20.48■□□□□ 0.87
CPNE1-224ENST00000483359 SH3GLB2Q9NR46 395 aa20.48■□□□□ 0.87
CPNE1-224ENST00000483359 HSP90AA1P07900 732 aaKnown RBP20.47■□□□□ 0.87
CPNE1-224ENST00000483359 HOXC6P09630 235 aa20.47■□□□□ 0.87
CPNE1-224ENST00000483359 XBP1P17861 261 aa20.47■□□□□ 0.87
CPNE1-224ENST00000483359 UBXN2AP68543 259 aa20.47■□□□□ 0.87
CPNE1-224ENST00000483359 IRF5Q13568 498 aa20.47■□□□□ 0.87
CPNE1-224ENST00000483359 RASGRP4Q8TDF6 673 aa20.47■□□□□ 0.87
CPNE1-224ENST00000483359 TMEM260Q9NX78 707 aa20.47■□□□□ 0.87
CPNE1-224ENST00000483359 BIN2Q9UBW5 565 aaPredicted RBP20.47■□□□□ 0.87
CPNE1-224ENST00000483359 BRCA2P51587 3418 aa20.47■□□□□ 0.87
CPNE1-224ENST00000483359 EIF2AK2P19525 551 aaKnown RBP20.46■□□□□ 0.87
CPNE1-224ENST00000483359 MRPL12P52815 198 aaKnown RBP20.46■□□□□ 0.87
CPNE1-224ENST00000483359 SH3TC2Q8TF17 1288 aa20.46■□□□□ 0.87
CPNE1-224ENST00000483359 RMDN3Q96TC7 470 aa20.46■□□□□ 0.87
CPNE1-224ENST00000483359 ESYT2A0FGR8 921 aa20.46■□□□□ 0.87
CPNE1-224ENST00000483359 PIK3CDO00329 1044 aa20.46■□□□□ 0.87
CPNE1-224ENST00000483359 XRCC5P13010 732 aaKnown RBP20.46■□□□□ 0.87
CPNE1-224ENST00000483359 GNA11P29992 359 aa20.46■□□□□ 0.87
CPNE1-224ENST00000483359 ALDH5A1P51649 535 aaPredicted RBP20.46■□□□□ 0.87
CPNE1-224ENST00000483359 GHRHRQ02643 423 aa20.46■□□□□ 0.87
CPNE1-224ENST00000483359 TRIM29Q14134 588 aa20.46■□□□□ 0.87
CPNE1-224ENST00000483359 C8orf76Q96K31 380 aa20.46■□□□□ 0.87
CPNE1-224ENST00000483359 CYP2C19P33261 490 aa20.45■□□□□ 0.86
CPNE1-224ENST00000483359 TRIM32Q13049 653 aa20.45■□□□□ 0.86
CPNE1-224ENST00000483359 ARHGEF16Q5VV41 709 aa20.45■□□□□ 0.86
CPNE1-224ENST00000483359 JAKMIP3Q5VZ66 844 aa20.45■□□□□ 0.86
CPNE1-224ENST00000483359 PHF20Q9BVI0 1012 aa20.45■□□□□ 0.86
CPNE1-224ENST00000483359 ADD3Q9UEY8 706 aaKnown RBP20.45■□□□□ 0.86
CPNE1-224ENST00000483359 SPDYE3A6NKU9 549 aa20.45■□□□□ 0.86
CPNE1-224ENST00000483359 MYCP01106 439 aaPredicted RBP20.45■□□□□ 0.86
CPNE1-224ENST00000483359 GRK4P32298 578 aa20.45■□□□□ 0.86
CPNE1-224ENST00000483359 KRT40Q6A162 431 aa20.45■□□□□ 0.86
CPNE1-224ENST00000483359 FBXO46Q6PJ61 603 aaPredicted RBP20.45■□□□□ 0.86
CPNE1-224ENST00000483359 REXO1Q8N1G1 1221 aaKnown RBP20.45■□□□□ 0.86
CPNE1-224ENST00000483359 MAP3K20Q9NYL2 800 aaKnown RBP20.45■□□□□ 0.86
CPNE1-224ENST00000483359 PCDHA4Q9UN74 947 aa20.45■□□□□ 0.86
CPNE1-224ENST00000483359 DIS3Q9Y2L1 958 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms