RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 C3orf80F5H4A9 247 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 M0R2N6 131 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 PIK3CDO00329 1044 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 CA12O43570 354 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 TLR2O60603 784 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 CLK2P49760 499 aaKnown RBP5.29□□□□□ -1.56
HDAC9-224ENST00000483142 VEGFBP49765 207 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 CCT2P78371 535 aaKnown RBP5.29□□□□□ -1.56
HDAC9-224ENST00000483142 TMEM132BQ14DG7 1078 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 PWP2Q15269 919 aaKnown RBP5.29□□□□□ -1.56
HDAC9-224ENST00000483142 TAF1CQ15572 869 aaPredicted RBP5.29□□□□□ -1.56
HDAC9-224ENST00000483142 GALNT17Q6IS24 598 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 C17orf99Q6UX52 265 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 NOL8Q76FK4 1167 aaKnown RBP5.29□□□□□ -1.56
HDAC9-224ENST00000483142 CCDC144CPQ8IYA2 1237 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 ABRAQ8N0Z2 381 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 NECAB1Q8N987 351 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 CHST13Q8NET6 341 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 PXYLP1Q8TE99 480 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 CCDC12Q8WUD4 166 aaPredicted RBP5.29□□□□□ -1.56
HDAC9-224ENST00000483142 CRYGNQ8WXF5 182 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 CLEC4DQ8WXI8 215 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 TNFRSF25Q93038 417 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 PHKBQ93100 1093 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 ZDHHC16Q969W1 377 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 RRP36Q96EU6 259 aaKnown RBP5.29□□□□□ -1.56
HDAC9-224ENST00000483142 PHF20Q9BVI0 1012 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 AMNQ9BXJ7 453 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 ZMYND12Q9H0C1 365 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 CPVLQ9H3G5 476 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 TXNRD2Q9NNW7 524 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 HOXC10Q9NYD6 342 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 MAP3K20Q9NYL2 800 aaKnown RBP5.29□□□□□ -1.56
HDAC9-224ENST00000483142 ORC3Q9UBD5 711 aaPredicted RBP5.29□□□□□ -1.56
HDAC9-224ENST00000483142 SEC63Q9UGP8 760 aaKnown RBP5.29□□□□□ -1.56
HDAC9-224ENST00000483142 FBXO40Q9UH90 709 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 KIF3AQ9Y496 699 aa5.29□□□□□ -1.56
HDAC9-224ENST00000483142 BAZ2BQ9UIF8 2168 aaKnown RBP5.29□□□□□ -1.56
HDAC9-224ENST00000483142 RPTORQ8N122 1335 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 FRMPD3Q5JV73 1810 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 SLC25A27O95847 323 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 IGHA2P01877 340 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 MMP1P03956 469 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 CYP2C8P10632 490 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 COL9A1P20849 921 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 PDCP20941 246 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 GJB2P29033 226 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 SLC16A2P36021 539 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 HSD17B4P51659 736 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 ERVK-9P63128 1117 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 ERVK-24P63145 666 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 SSRP1Q08945 709 aaKnown RBP5.28□□□□□ -1.56
HDAC9-224ENST00000483142 STK3Q13188 491 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 CRHR2Q13324 411 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 AP3B2Q13367 1082 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 IRF5Q13568 498 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 MCTP2Q6DN12 878 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 OTUD7BQ6GQQ9 843 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 FBXO11Q86XK2 927 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 DNAJC5GQ8N7S2 189 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 FBXO18Q8NFZ0 1043 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 NLRP7Q8WX94 980 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 GPKOWQ92917 476 aaPredicted RBP eCLIP5.28□□□□□ -1.56
HDAC9-224ENST00000483142 KIFC2Q96AC6 838 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 P2RX7Q99572 595 aaKnown RBP5.28□□□□□ -1.56
HDAC9-224ENST00000483142 SLC26A6Q9BXS9 759 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 MOV10L1Q9BXT6 1211 aaKnown RBP5.28□□□□□ -1.56
HDAC9-224ENST00000483142 UBA5Q9GZZ9 404 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 SPATC1LQ9H0A9 340 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 GLT8D2Q9H1C3 349 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 ACAD9Q9H845 621 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 CWC22Q9HCG8 908 aaKnown RBP5.28□□□□□ -1.56
HDAC9-224ENST00000483142 GPCPD1Q9NPB8 672 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 RNF146Q9NTX7 359 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 BTBD7Q9P203 1132 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 RBPJLQ9UBG7 517 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 MORC2Q9Y6X9 1032 aaPredicted RBP5.28□□□□□ -1.56
HDAC9-224ENST00000483142 MYH7BA7E2Y1 1941 aa5.28□□□□□ -1.56
HDAC9-224ENST00000483142 PFASO15067 1338 aa5.27□□□□□ -1.57
HDAC9-224ENST00000483142 DNAJC25-GNG10A0A024R161 153 aa5.27□□□□□ -1.57
HDAC9-224ENST00000483142 NFIBO00712 420 aa5.27□□□□□ -1.57
HDAC9-224ENST00000483142 MEIS2O14770 477 aa5.27□□□□□ -1.57
HDAC9-224ENST00000483142 AOC2O75106 756 aa5.27□□□□□ -1.57
HDAC9-224ENST00000483142 ZBED4O75132 1171 aa5.27□□□□□ -1.57
HDAC9-224ENST00000483142 BRD1O95696 1058 aa5.27□□□□□ -1.57
HDAC9-224ENST00000483142 HOXC6P09630 235 aa5.27□□□□□ -1.57
HDAC9-224ENST00000483142 EDNRBP24530 442 aa5.27□□□□□ -1.57
HDAC9-224ENST00000483142 U2AF2P26368 475 aaKnown RBP eCLIP5.27□□□□□ -1.57
HDAC9-224ENST00000483142 CALML3P27482 149 aa5.27□□□□□ -1.57
HDAC9-224ENST00000483142 MAPK4P31152 587 aa5.27□□□□□ -1.57
HDAC9-224ENST00000483142 CLCN1P35523 988 aa5.27□□□□□ -1.57
HDAC9-224ENST00000483142 STAT3P40763 770 aa5.27□□□□□ -1.57
HDAC9-224ENST00000483142 CCNA1P78396 465 aa5.27□□□□□ -1.57
HDAC9-224ENST00000483142 MDM2Q00987 491 aaPredicted RBP5.27□□□□□ -1.57
HDAC9-224ENST00000483142 ORC2Q13416 577 aaPredicted RBP5.27□□□□□ -1.57
HDAC9-224ENST00000483142 GRB14Q14449 540 aa5.27□□□□□ -1.57
HDAC9-224ENST00000483142 KRT40Q6A162 431 aa5.27□□□□□ -1.57
HDAC9-224ENST00000483142 SNRNP48Q6IEG0 339 aaKnown RBP5.27□□□□□ -1.57
HDAC9-224ENST00000483142 MOXD1Q6UVY6 613 aa5.27□□□□□ -1.57
HDAC9-224ENST00000483142 HOMER1Q86YM7 354 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms