RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 LY9Q9HBG7 655 aa16.14■□□□□ 0.17
VARS-225ENST00000482996 PRKAG2Q9UGJ0 569 aa16.14■□□□□ 0.17
VARS-225ENST00000482996 RANBP2P49792 3224 aaKnown RBP16.13■□□□□ 0.17
VARS-225ENST00000482996 A0A1W2PQ45 241 aaPredicted RBP16.13■□□□□ 0.17
VARS-225ENST00000482996 A0A1W2PQY0 241 aa16.13■□□□□ 0.17
VARS-225ENST00000482996 CCDC69A6NI79 296 aa16.13■□□□□ 0.17
VARS-225ENST00000482996 DDAH1O94760 285 aa16.13■□□□□ 0.17
VARS-225ENST00000482996 CST5P28325 142 aaPredicted RBP16.13■□□□□ 0.17
VARS-225ENST00000482996 KIF5BP33176 963 aa16.13■□□□□ 0.17
VARS-225ENST00000482996 ACLYP53396 1101 aa16.13■□□□□ 0.17
VARS-225ENST00000482996 PDE4DQ08499 809 aa16.13■□□□□ 0.17
VARS-225ENST00000482996 SNX17Q15036 470 aa16.13■□□□□ 0.17
VARS-225ENST00000482996 KCNA10Q16322 511 aa16.13■□□□□ 0.17
VARS-225ENST00000482996 C1orf53Q5VUE5 145 aa16.13■□□□□ 0.17
VARS-225ENST00000482996 ERICH6BQ5W0A0 696 aa16.13■□□□□ 0.17
VARS-225ENST00000482996 ZNF654Q8IZM8 581 aa16.13■□□□□ 0.17
VARS-225ENST00000482996 CTCFLQ8NI51 663 aaPredicted RBP16.13■□□□□ 0.17
VARS-225ENST00000482996 MTMR8Q96EF0 704 aa16.13■□□□□ 0.17
VARS-225ENST00000482996 MAP3K14Q99558 947 aa16.13■□□□□ 0.17
VARS-225ENST00000482996 AP5M1Q9H0R1 490 aa16.13■□□□□ 0.17
VARS-225ENST00000482996 RBM27Q9P2N5 1060 aaKnown RBP16.13■□□□□ 0.17
VARS-225ENST00000482996 DDX49Q9Y6V7 483 aaKnown RBP16.13■□□□□ 0.17
VARS-225ENST00000482996 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.12■□□□□ 0.17
VARS-225ENST00000482996 SH2B2O14492 632 aaPredicted RBP16.12■□□□□ 0.17
VARS-225ENST00000482996 ADCY6O43306 1168 aa16.12■□□□□ 0.17
VARS-225ENST00000482996 TRIM60Q495X7 471 aa16.12■□□□□ 0.17
VARS-225ENST00000482996 GNASQ5JWF2 1037 aa16.12■□□□□ 0.17
VARS-225ENST00000482996 TAPT1Q6NXT6 567 aa16.12■□□□□ 0.17
VARS-225ENST00000482996 HOMER1Q86YM7 354 aa16.12■□□□□ 0.17
VARS-225ENST00000482996 GLT1D1Q96MS3 346 aa16.12■□□□□ 0.17
VARS-225ENST00000482996 GDF15Q99988 308 aa16.12■□□□□ 0.17
VARS-225ENST00000482996 PRO3102Q9H379 93 aa16.12■□□□□ 0.17
VARS-225ENST00000482996 RIOX1Q9H6W3 641 aa16.12■□□□□ 0.17
VARS-225ENST00000482996 STARD7Q9NQZ5 370 aa16.12■□□□□ 0.17
VARS-225ENST00000482996 PCDHA1Q9Y5I3 950 aa16.12■□□□□ 0.17
VARS-225ENST00000482996 A0A1W2PPC1 479 aa16.11■□□□□ 0.17
VARS-225ENST00000482996 MYADML2A6NDP7 307 aa16.11■□□□□ 0.17
VARS-225ENST00000482996 SMPD1P17405 629 aa16.11■□□□□ 0.17
VARS-225ENST00000482996 EDNRBP24530 442 aa16.11■□□□□ 0.17
VARS-225ENST00000482996 LIFRP42702 1097 aa16.11■□□□□ 0.17
VARS-225ENST00000482996 MAGEA10P43363 369 aaPredicted RBP16.11■□□□□ 0.17
VARS-225ENST00000482996 GNAQP50148 359 aa16.11■□□□□ 0.17
VARS-225ENST00000482996 KRT32Q14532 448 aa16.11■□□□□ 0.17
VARS-225ENST00000482996 CCSAPQ6IQ19 270 aaPredicted RBP16.11■□□□□ 0.17
VARS-225ENST00000482996 TLK2Q86UE8 772 aa16.11■□□□□ 0.17
VARS-225ENST00000482996 SYTL5Q8TDW5 730 aaPredicted RBP16.11■□□□□ 0.17
VARS-225ENST00000482996 VTI1AQ96AJ9 217 aa16.11■□□□□ 0.17
VARS-225ENST00000482996 PIGSQ96S52 555 aa16.11■□□□□ 0.17
VARS-225ENST00000482996 LBHD1Q9BQE6 289 aaPredicted RBP16.11■□□□□ 0.17
VARS-225ENST00000482996 LZTS2Q9BRK4 669 aa16.11■□□□□ 0.17
VARS-225ENST00000482996 GPHNQ9NQX3 736 aaPredicted RBP16.11■□□□□ 0.17
VARS-225ENST00000482996 PDGFCQ9NRA1 345 aa16.11■□□□□ 0.17
VARS-225ENST00000482996 PPP4R2Q9NY27 417 aa16.11■□□□□ 0.17
VARS-225ENST00000482996 GNEQ9Y223 722 aaKnown RBP16.11■□□□□ 0.17
VARS-225ENST00000482996 Q9Y3F1 56 aa16.11■□□□□ 0.17
VARS-225ENST00000482996 LCTP09848 1927 aa16.11■□□□□ 0.17
VARS-225ENST00000482996 MYH6P13533 1939 aa16.11■□□□□ 0.17
VARS-225ENST00000482996 PNMA6FA0A0J9YX94 578 aa16.1■□□□□ 0.17
VARS-225ENST00000482996 DYNC1LI2O43237 492 aaPredicted RBP16.1■□□□□ 0.17
VARS-225ENST00000482996 ZEB2O60315 1214 aa16.1■□□□□ 0.17
VARS-225ENST00000482996 CFBP00751 764 aa16.1■□□□□ 0.17
VARS-225ENST00000482996 ASGR1P07306 291 aa16.1■□□□□ 0.17
VARS-225ENST00000482996 CALM1P0DP23 149 aa16.1■□□□□ 0.17
VARS-225ENST00000482996 CALM2P0DP24 149 aa16.1■□□□□ 0.17
VARS-225ENST00000482996 CALM3P0DP25 149 aa16.1■□□□□ 0.17
VARS-225ENST00000482996 BMP8BP34820 402 aa16.1■□□□□ 0.17
VARS-225ENST00000482996 NKX3-2P78367 333 aa16.1■□□□□ 0.17
VARS-225ENST00000482996 TLE2Q04725 743 aa16.1■□□□□ 0.17
VARS-225ENST00000482996 DUSP28Q4G0W2 176 aa16.1■□□□□ 0.17
VARS-225ENST00000482996 NSUN6Q8TEA1 469 aaKnown RBP16.1■□□□□ 0.17
VARS-225ENST00000482996 TBC1D5Q92609 795 aa16.1■□□□□ 0.17
VARS-225ENST00000482996 NEK1Q96PY6 1258 aa16.1■□□□□ 0.17
VARS-225ENST00000482996 WDR11Q9BZH6 1224 aa16.1■□□□□ 0.17
VARS-225ENST00000482996 PRDM5Q9NQX1 630 aaPredicted RBP16.1■□□□□ 0.17
VARS-225ENST00000482996 SLC12A7Q9Y666 1083 aa16.1■□□□□ 0.17
VARS-225ENST00000482996 ELP1O95163 1332 aa16.1■□□□□ 0.17
VARS-225ENST00000482996 BAZ2BQ9UIF8 2168 aaKnown RBP16.1■□□□□ 0.17
VARS-225ENST00000482996 RBM47A0AV96 593 aaKnown RBP16.09■□□□□ 0.17
VARS-225ENST00000482996 CYTH3O43739 400 aa16.09■□□□□ 0.17
VARS-225ENST00000482996 PPP1R11O60927 126 aaPredicted RBP16.09■□□□□ 0.17
VARS-225ENST00000482996 IRX5P78411 483 aaPredicted RBP16.09■□□□□ 0.17
VARS-225ENST00000482996 BEX3Q00994 111 aa16.09■□□□□ 0.17
VARS-225ENST00000482996 FSCN1Q16658 493 aaKnown RBP16.09■□□□□ 0.17
VARS-225ENST00000482996 SLC35G1Q2M3R5 365 aa16.09■□□□□ 0.17
VARS-225ENST00000482996 TSGA10IPQ3SY00 556 aa16.09■□□□□ 0.17
VARS-225ENST00000482996 SYNE3Q6ZMZ3 975 aa16.09■□□□□ 0.17
VARS-225ENST00000482996 SAMD3Q8N6K7 520 aa16.09■□□□□ 0.17
VARS-225ENST00000482996 SCFD2Q8WU76 684 aa16.09■□□□□ 0.17
VARS-225ENST00000482996 TAAR1Q96RJ0 339 aa16.09■□□□□ 0.17
VARS-225ENST00000482996 IWS1Q96ST2 819 aa16.09■□□□□ 0.17
VARS-225ENST00000482996 RMDN3Q96TC7 470 aa16.09■□□□□ 0.17
VARS-225ENST00000482996 MYL10Q9BUA6 226 aa16.09■□□□□ 0.17
VARS-225ENST00000482996 LRRC2Q9BYS8 371 aa16.09■□□□□ 0.17
VARS-225ENST00000482996 MAP3K20Q9NYL2 800 aaKnown RBP16.09■□□□□ 0.17
VARS-225ENST00000482996 LRRC37A2A6NM11 1700 aa16.08■□□□□ 0.17
VARS-225ENST00000482996 A0A0U1RQG5 324 aaPredicted RBP16.08■□□□□ 0.16
VARS-225ENST00000482996 DCDC2CA8MYV0 355 aa16.08■□□□□ 0.16
VARS-225ENST00000482996 NKRFO15226 690 aaKnown RBP eCLIP16.08■□□□□ 0.16
VARS-225ENST00000482996 CTAGE5O15320 804 aa16.08■□□□□ 0.16
VARS-225ENST00000482996 PQBP1O60828 265 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms