RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 CFAP45Q9UL16 551 aa17.18■□□□□ 0.34
PHGDH-205ENST00000482968 RABGAP1Q9Y3P9 1069 aa17.18■□□□□ 0.34
PHGDH-205ENST00000482968 CLIC4Q9Y696 253 aa17.18■□□□□ 0.34
PHGDH-205ENST00000482968 FIBPO43427 364 aa17.17■□□□□ 0.34
PHGDH-205ENST00000482968 NONOQ15233 471 aaKnown RBP eCLIP17.17■□□□□ 0.34
PHGDH-205ENST00000482968 FCHSD1Q86WN1 690 aa17.17■□□□□ 0.34
PHGDH-205ENST00000482968 MCF2L2Q86YR7 1114 aa17.17■□□□□ 0.34
PHGDH-205ENST00000482968 NOL7Q9UMY1 257 aaKnown RBP17.17■□□□□ 0.34
PHGDH-205ENST00000482968 PIK3CDO00329 1044 aa17.17■□□□□ 0.34
PHGDH-205ENST00000482968 ATL3Q6DD88 541 aa17.17■□□□□ 0.34
PHGDH-205ENST00000482968 IFNL1Q8IU54 200 aa17.17■□□□□ 0.34
PHGDH-205ENST00000482968 RIOX2Q8IUF8 465 aa17.17■□□□□ 0.34
PHGDH-205ENST00000482968 TBCKQ8TEA7 893 aa17.17■□□□□ 0.34
PHGDH-205ENST00000482968 PCDHB6Q9Y5E3 794 aa17.17■□□□□ 0.34
PHGDH-205ENST00000482968 RASSF10A6NK89 507 aa17.16■□□□□ 0.34
PHGDH-205ENST00000482968 SPDYE3A6NKU9 549 aa17.16■□□□□ 0.34
PHGDH-205ENST00000482968 MCM4P33991 863 aa17.16■□□□□ 0.34
PHGDH-205ENST00000482968 SREBF2Q12772 1141 aa17.16■□□□□ 0.34
PHGDH-205ENST00000482968 SF3A1Q15459 793 aaKnown RBP17.16■□□□□ 0.34
PHGDH-205ENST00000482968 TKFCQ3LXA3 575 aa17.16■□□□□ 0.34
PHGDH-205ENST00000482968 NSMFQ6X4W1 530 aa17.16■□□□□ 0.34
PHGDH-205ENST00000482968 NCAPG2Q86XI2 1143 aa17.16■□□□□ 0.34
PHGDH-205ENST00000482968 ANKRD13CQ8N6S4 541 aa17.16■□□□□ 0.34
PHGDH-205ENST00000482968 CAPNS2Q96L46 248 aa17.16■□□□□ 0.34
PHGDH-205ENST00000482968 PARK7Q99497 189 aaKnown RBP17.16■□□□□ 0.34
PHGDH-205ENST00000482968 MOV10L1Q9BXT6 1211 aaKnown RBP17.16■□□□□ 0.34
PHGDH-205ENST00000482968 A0A0G2JMZ2 1700 aa17.16■□□□□ 0.34
PHGDH-205ENST00000482968 WNT7AO00755 349 aa17.15■□□□□ 0.34
PHGDH-205ENST00000482968 ERVK-9P63128 1117 aa17.15■□□□□ 0.34
PHGDH-205ENST00000482968 ERVK-24P63145 666 aa17.15■□□□□ 0.34
PHGDH-205ENST00000482968 ANO1Q5XXA6 986 aa17.15■□□□□ 0.34
PHGDH-205ENST00000482968 GTF3C2Q8WUA4 911 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-205ENST00000482968 SPATA32Q96LK8 384 aa17.15■□□□□ 0.34
PHGDH-205ENST00000482968 SCAND2PQ9GZW5 306 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-205ENST00000482968 ACAD9Q9H845 621 aa17.15■□□□□ 0.34
PHGDH-205ENST00000482968 RTEL1Q9NZ71 1219 aa17.15■□□□□ 0.34
PHGDH-205ENST00000482968 AOC2O75106 756 aa17.15■□□□□ 0.34
PHGDH-205ENST00000482968 PRPF40AO75400 957 aaKnown RBP17.15■□□□□ 0.34
PHGDH-205ENST00000482968 FOSP01100 380 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-205ENST00000482968 TM4SF4P48230 202 aa17.15■□□□□ 0.34
PHGDH-205ENST00000482968 GCLCP48506 637 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-205ENST00000482968 HSD17B4P51659 736 aa17.15■□□□□ 0.34
PHGDH-205ENST00000482968 RPS6P62753 249 aaKnown RBP17.15■□□□□ 0.34
PHGDH-205ENST00000482968 HTRA3P83110 453 aa17.15■□□□□ 0.34
PHGDH-205ENST00000482968 AP3B2Q13367 1082 aa17.15■□□□□ 0.34
PHGDH-205ENST00000482968 TAF1CQ15572 869 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-205ENST00000482968 ZNF174Q15697 407 aa17.15■□□□□ 0.34
PHGDH-205ENST00000482968 TTC38Q5R3I4 469 aa17.15■□□□□ 0.34
PHGDH-205ENST00000482968 MCTP2Q6DN12 878 aa17.15■□□□□ 0.34
PHGDH-205ENST00000482968 RNF207Q6ZRF8 634 aa17.15■□□□□ 0.34
PHGDH-205ENST00000482968 CHST13Q8NET6 341 aa17.15■□□□□ 0.34
PHGDH-205ENST00000482968 GPRC5AQ8NFJ5 357 aa17.15■□□□□ 0.34
PHGDH-205ENST00000482968 ANO3Q9BYT9 981 aa17.15■□□□□ 0.34
PHGDH-205ENST00000482968 POLR3EQ9NVU0 708 aa17.15■□□□□ 0.34
PHGDH-205ENST00000482968 GOLGA6L22H0YM25 854 aa17.14■□□□□ 0.33
PHGDH-205ENST00000482968 ERCC3P19447 782 aa17.14■□□□□ 0.33
PHGDH-205ENST00000482968 TRAPPC10P48553 1259 aa17.14■□□□□ 0.33
PHGDH-205ENST00000482968 NOGQ13253 232 aa17.14■□□□□ 0.33
PHGDH-205ENST00000482968 BAATQ14032 418 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-205ENST00000482968 LETM2Q2VYF4 491 aa17.14■□□□□ 0.33
PHGDH-205ENST00000482968 NEK8Q86SG6 692 aa17.14■□□□□ 0.33
PHGDH-205ENST00000482968 LEO1Q8WVC0 666 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-205ENST00000482968 R3HDMLQ9H3Y0 253 aa17.14■□□□□ 0.33
PHGDH-205ENST00000482968 SLC25A27O95847 323 aa17.13■□□□□ 0.33
PHGDH-205ENST00000482968 MCM7P33993 719 aa17.13■□□□□ 0.33
PHGDH-205ENST00000482968 STK38Q15208 465 aa17.13■□□□□ 0.33
PHGDH-205ENST00000482968 TPRNQ4KMQ1 711 aa17.13■□□□□ 0.33
PHGDH-205ENST00000482968 SLC30A10Q6XR72 485 aa17.13■□□□□ 0.33
PHGDH-205ENST00000482968 TEX2Q8IWB9 1127 aa17.13■□□□□ 0.33
PHGDH-205ENST00000482968 SAMD3Q8N6K7 520 aa17.13■□□□□ 0.33
PHGDH-205ENST00000482968 SYTL5Q8TDW5 730 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-205ENST00000482968 ZCCHC17Q9NP64 241 aaKnown RBP17.13■□□□□ 0.33
PHGDH-205ENST00000482968 MAP3K20Q9NYL2 800 aaKnown RBP17.13■□□□□ 0.33
PHGDH-205ENST00000482968 COL20A1Q9P218 1284 aa17.13■□□□□ 0.33
PHGDH-205ENST00000482968 RCOR1Q9UKL0 485 aa17.13■□□□□ 0.33
PHGDH-205ENST00000482968 MYH7BA7E2Y1 1941 aa17.13■□□□□ 0.33
PHGDH-205ENST00000482968 CCNT1O60563 726 aaKnown RBP17.12■□□□□ 0.33
PHGDH-205ENST00000482968 NASPP49321 788 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-205ENST00000482968 GHRHRQ02643 423 aa17.12■□□□□ 0.33
PHGDH-205ENST00000482968 WDR78Q5VTH9 848 aa17.12■□□□□ 0.33
PHGDH-205ENST00000482968 ANKRD35Q8N283 1001 aa17.12■□□□□ 0.33
PHGDH-205ENST00000482968 LINC00301Q8NCQ3 95 aa17.12■□□□□ 0.33
PHGDH-205ENST00000482968 PURBQ96QR8 312 aaKnown RBP17.12■□□□□ 0.33
PHGDH-205ENST00000482968 A1CFQ9NQ94 594 aaKnown RBP17.12■□□□□ 0.33
PHGDH-205ENST00000482968 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.12■□□□□ 0.33
PHGDH-205ENST00000482968 FBXO40Q9UH90 709 aa17.12■□□□□ 0.33
PHGDH-205ENST00000482968 CPA4Q9UI42 421 aa17.12■□□□□ 0.33
PHGDH-205ENST00000482968 EDIL3O43854 480 aa17.12■□□□□ 0.33
PHGDH-205ENST00000482968 SLC39A14Q15043 492 aa17.12■□□□□ 0.33
PHGDH-205ENST00000482968 PTPAQ15257 358 aa17.12■□□□□ 0.33
PHGDH-205ENST00000482968 TAAR1Q96RJ0 339 aa17.12■□□□□ 0.33
PHGDH-205ENST00000482968 PORCNQ9H237 461 aa17.12■□□□□ 0.33
PHGDH-205ENST00000482968 CYP39A1Q9NYL5 469 aa17.12■□□□□ 0.33
PHGDH-205ENST00000482968 YEATS4O95619 227 aa17.11■□□□□ 0.33
PHGDH-205ENST00000482968 MARCKSP29966 332 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-205ENST00000482968 UBXN2AP68543 259 aa17.11■□□□□ 0.33
PHGDH-205ENST00000482968 CCNA1P78396 465 aa17.11■□□□□ 0.33
PHGDH-205ENST00000482968 ARHGAP4P98171 946 aa17.11■□□□□ 0.33
PHGDH-205ENST00000482968 CSPP1Q1MSJ5 1256 aa17.11■□□□□ 0.33
PHGDH-205ENST00000482968 CCAR1Q8IX12 1150 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms