RNA–Protein interactions for RNA: ENST00000482693.1

SF1-215, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-215ENST00000482693 GHRHRQ02643 423 aa19.34■□□□□ 0.69
SF1-215ENST00000482693 STK3Q13188 491 aa19.34■□□□□ 0.69
SF1-215ENST00000482693 PWP2Q15269 919 aaKnown RBP19.34■□□□□ 0.69
SF1-215ENST00000482693 NTRK3Q16288 839 aa19.34■□□□□ 0.69
SF1-215ENST00000482693 CPLX2Q6PUV4 134 aaKnown RBP19.34■□□□□ 0.69
SF1-215ENST00000482693 SLC30A10Q6XR72 485 aa19.34■□□□□ 0.69
SF1-215ENST00000482693 HMX1Q9NP08 348 aaPredicted RBP19.34■□□□□ 0.69
SF1-215ENST00000482693 hCG_1642624A0A1W2PR95 340 aa19.33■□□□□ 0.68
SF1-215ENST00000482693 hCG_1984214I3L0E3 225 aa19.33■□□□□ 0.68
SF1-215ENST00000482693 OPLAHO14841 1288 aa19.33■□□□□ 0.68
SF1-215ENST00000482693 HSD17B4P51659 736 aa19.33■□□□□ 0.68
SF1-215ENST00000482693 AKAP17AQ02040 695 aaKnown RBP19.33■□□□□ 0.68
SF1-215ENST00000482693 MTFR1Q15390 333 aa19.33■□□□□ 0.68
SF1-215ENST00000482693 ZNF713Q8N859 430 aaPredicted RBP19.33■□□□□ 0.68
SF1-215ENST00000482693 DNERQ8NFT8 737 aa19.33■□□□□ 0.68
SF1-215ENST00000482693 TBC1D5Q92609 795 aa19.33■□□□□ 0.68
SF1-215ENST00000482693 FGD4Q96M96 766 aa19.33■□□□□ 0.68
SF1-215ENST00000482693 RNF208Q9H0X6 261 aa19.33■□□□□ 0.68
SF1-215ENST00000482693 UNC93B1Q9H1C4 597 aa19.33■□□□□ 0.68
SF1-215ENST00000482693 B4DLN1 442 aa19.32■□□□□ 0.68
SF1-215ENST00000482693 GCOM1H8Y6P7 765 aaPredicted RBP19.32■□□□□ 0.68
SF1-215ENST00000482693 CFBP00751 764 aa19.32■□□□□ 0.68
SF1-215ENST00000482693 MYCP01106 439 aaPredicted RBP19.32■□□□□ 0.68
SF1-215ENST00000482693 POLR2MP0CAP2 368 aa19.32■□□□□ 0.68
SF1-215ENST00000482693 MRPL12P52815 198 aaKnown RBP19.32■□□□□ 0.68
SF1-215ENST00000482693 HEATR3Q7Z4Q2 680 aa19.32■□□□□ 0.68
SF1-215ENST00000482693 SYTL5Q8TDW5 730 aaPredicted RBP19.32■□□□□ 0.68
SF1-215ENST00000482693 MPHOSPH6Q99547 160 aaKnown RBP19.32■□□□□ 0.68
SF1-215ENST00000482693 RNF26Q9BY78 433 aaPredicted RBP19.32■□□□□ 0.68
SF1-215ENST00000482693 LIMCH1Q9UPQ0 1083 aa19.32■□□□□ 0.68
SF1-215ENST00000482693 CNPY2Q9Y2B0 182 aa19.32■□□□□ 0.68
SF1-215ENST00000482693 CDKL5O76039 1030 aa19.31■□□□□ 0.68
SF1-215ENST00000482693 GJB1P08034 283 aa19.31■□□□□ 0.68
SF1-215ENST00000482693 CYBAP13498 195 aa19.31■□□□□ 0.68
SF1-215ENST00000482693 CAPN2P17655 700 aa19.31■□□□□ 0.68
SF1-215ENST00000482693 SCRN1Q12765 414 aa19.31■□□□□ 0.68
SF1-215ENST00000482693 PFKFB3Q16875 520 aaPredicted RBP19.31■□□□□ 0.68
SF1-215ENST00000482693 PPP1R18Q6NYC8 613 aa19.31■□□□□ 0.68
SF1-215ENST00000482693 TEX2Q8IWB9 1127 aa19.31■□□□□ 0.68
SF1-215ENST00000482693 TRIM22Q8IYM9 498 aa19.31■□□□□ 0.68
SF1-215ENST00000482693 MORC4Q8TE76 937 aa19.31■□□□□ 0.68
SF1-215ENST00000482693 PHKBQ93100 1093 aa19.31■□□□□ 0.68
SF1-215ENST00000482693 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.31■□□□□ 0.687e-7■■■■■ 40.1
SF1-215ENST00000482693 PAK6Q9NQU5 681 aaPredicted RBP19.31■□□□□ 0.68
SF1-215ENST00000482693 BAZ2BQ9UIF8 2168 aaKnown RBP19.31■□□□□ 0.68
SF1-215ENST00000482693 ZNFX1Q9P2E3 1918 aaKnown RBP19.31■□□□□ 0.68
SF1-215ENST00000482693 ST18O60284 1047 aa19.3■□□□□ 0.68
SF1-215ENST00000482693 SNAI1O95863 264 aaPredicted RBP19.3■□□□□ 0.68
SF1-215ENST00000482693 SCG2P13521 617 aa19.3■□□□□ 0.68
SF1-215ENST00000482693 ALDH5A1P51649 535 aaPredicted RBP19.3■□□□□ 0.68
SF1-215ENST00000482693 SSRP1Q08945 709 aaKnown RBP19.3■□□□□ 0.68
SF1-215ENST00000482693 ME3Q16798 604 aa19.3■□□□□ 0.68
SF1-215ENST00000482693 WWC2Q6AWC2 1192 aa19.3■□□□□ 0.68
SF1-215ENST00000482693 NOL8Q76FK4 1167 aaKnown RBP19.3■□□□□ 0.68
SF1-215ENST00000482693 ARMCX2Q7L311 632 aa19.3■□□□□ 0.68
SF1-215ENST00000482693 NSUN6Q8TEA1 469 aaKnown RBP19.3■□□□□ 0.68
SF1-215ENST00000482693 GPKOWQ92917 476 aaPredicted RBP eCLIP19.3■□□□□ 0.683e-7■■□□□ 13
SF1-215ENST00000482693 CUL5Q93034 780 aa19.3■□□□□ 0.68
SF1-215ENST00000482693 ZSCAN31Q96LW9 406 aaPredicted RBP19.3■□□□□ 0.68
SF1-215ENST00000482693 PURBQ96QR8 312 aaKnown RBP19.3■□□□□ 0.68
SF1-215ENST00000482693 SLC26A6Q9BXS9 759 aa19.3■□□□□ 0.68
SF1-215ENST00000482693 PSTPIP2Q9H939 334 aa19.3■□□□□ 0.68
SF1-215ENST00000482693 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.3■□□□□ 0.68
SF1-215ENST00000482693 BARHL2Q9NY43 387 aa19.3■□□□□ 0.68
SF1-215ENST00000482693 SMCHD1A6NHR9 2005 aa19.3■□□□□ 0.68
SF1-215ENST00000482693 ASTN1O14525 1302 aa19.29■□□□□ 0.68
SF1-215ENST00000482693 PIK3CDO00329 1044 aa19.29■□□□□ 0.68
SF1-215ENST00000482693 CCND3P30281 292 aaPredicted RBP19.29■□□□□ 0.68
SF1-215ENST00000482693 NAPAP54920 295 aa19.29■□□□□ 0.68
SF1-215ENST00000482693 PRAMEF19Q5SWL8 479 aa19.29■□□□□ 0.68
SF1-215ENST00000482693 TRPV1Q8NER1 839 aa19.29■□□□□ 0.68
SF1-215ENST00000482693 TAAR1Q96RJ0 339 aa19.29■□□□□ 0.68
SF1-215ENST00000482693 RMDN3Q96TC7 470 aa19.29■□□□□ 0.68
SF1-215ENST00000482693 ABHD16BQ9H3Z7 469 aa19.29■□□□□ 0.68
SF1-215ENST00000482693 STXBP3O00186 592 aa19.28■□□□□ 0.68
SF1-215ENST00000482693 CNGA1P29973 690 aa19.28■□□□□ 0.68
SF1-215ENST00000482693 HOXA13P31271 388 aaPredicted RBP19.28■□□□□ 0.68
SF1-215ENST00000482693 ACVR2BQ13705 512 aa19.28■□□□□ 0.68
SF1-215ENST00000482693 PKN1Q16512 942 aa19.28■□□□□ 0.68
SF1-215ENST00000482693 CCDC12Q8WUD4 166 aaPredicted RBP19.28■□□□□ 0.68
SF1-215ENST00000482693 GTF3C6Q969F1 213 aa19.28■□□□□ 0.68
SF1-215ENST00000482693 IWS1Q96ST2 819 aa19.28■□□□□ 0.68
SF1-215ENST00000482693 GLT8D2Q9H1C3 349 aa19.28■□□□□ 0.68
SF1-215ENST00000482693 COL20A1Q9P218 1284 aa19.28■□□□□ 0.68
SF1-215ENST00000482693 MEIS2O14770 477 aa19.27■□□□□ 0.68
SF1-215ENST00000482693 SEPT4O43236 478 aa19.27■□□□□ 0.68
SF1-215ENST00000482693 MSCO60682 206 aa19.27■□□□□ 0.68
SF1-215ENST00000482693 SGPL1O95470 568 aa19.27■□□□□ 0.68
SF1-215ENST00000482693 ZNF865P0CJ78 1059 aaPredicted RBP19.27■□□□□ 0.68
SF1-215ENST00000482693 EDNRBP24530 442 aa19.27■□□□□ 0.68
SF1-215ENST00000482693 GJA8P48165 433 aa19.27■□□□□ 0.68
SF1-215ENST00000482693 PDE4DQ08499 809 aa19.27■□□□□ 0.68
SF1-215ENST00000482693 ARHGEF16Q5VV41 709 aa19.27■□□□□ 0.68
SF1-215ENST00000482693 NECAB1Q8N987 351 aa19.27■□□□□ 0.68
SF1-215ENST00000482693 SMARCC2Q8TAQ2 1214 aa19.27■□□□□ 0.68
SF1-215ENST00000482693 DEFB118Q96PH6 123 aa19.27■□□□□ 0.68
SF1-215ENST00000482693 RIC8AQ9NPQ8 531 aa19.27■□□□□ 0.68
SF1-215ENST00000482693 SH2B1Q9NRF2 756 aaPredicted RBP19.27■□□□□ 0.68
SF1-215ENST00000482693 MYH6P13533 1939 aa19.27■□□□□ 0.67
SF1-215ENST00000482693 SMCO2A6NFE2 343 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms