RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 HMGB1P09429 215 aaKnown RBP11.62□□□□□ -0.55
SPTLC1-206ENST00000482632 EN2P19622 333 aaPredicted RBP11.62□□□□□ -0.55
SPTLC1-206ENST00000482632 PSMA5P28066 241 aa11.62□□□□□ -0.55
SPTLC1-206ENST00000482632 KIF5BP33176 963 aa11.62□□□□□ -0.55
SPTLC1-206ENST00000482632 CACNB2Q08289 660 aaPredicted RBP11.62□□□□□ -0.55
SPTLC1-206ENST00000482632 HABP4Q5JVS0 413 aaKnown RBP11.62□□□□□ -0.55
SPTLC1-206ENST00000482632 DHX32Q7L7V1 743 aaKnown RBP11.62□□□□□ -0.55
SPTLC1-206ENST00000482632 DEFB118Q96PH6 123 aa11.62□□□□□ -0.55
SPTLC1-206ENST00000482632 USP26Q9BXU7 913 aa11.62□□□□□ -0.55
SPTLC1-206ENST00000482632 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.62□□□□□ -0.55
SPTLC1-206ENST00000482632 MAD2L2Q9UI95 211 aa11.62□□□□□ -0.55
SPTLC1-206ENST00000482632 HTTP42858 3142 aa11.62□□□□□ -0.55
SPTLC1-206ENST00000482632 A0A0C4DFX4 3053 aa11.62□□□□□ -0.55
SPTLC1-206ENST00000482632 RPTORQ8N122 1335 aa11.61□□□□□ -0.55
SPTLC1-206ENST00000482632 LCTP09848 1927 aa11.61□□□□□ -0.55
SPTLC1-206ENST00000482632 KLF18A0A0U1RQI7 1052 aa11.61□□□□□ -0.55
SPTLC1-206ENST00000482632 TFRCP02786 760 aaKnown RBP11.61□□□□□ -0.55
SPTLC1-206ENST00000482632 CALM1P0DP23 149 aa11.61□□□□□ -0.55
SPTLC1-206ENST00000482632 CALM2P0DP24 149 aa11.61□□□□□ -0.55
SPTLC1-206ENST00000482632 CALM3P0DP25 149 aa11.61□□□□□ -0.55
SPTLC1-206ENST00000482632 QRICH1Q2TAL8 776 aa11.61□□□□□ -0.55
SPTLC1-206ENST00000482632 TSGA10IPQ3SY00 556 aa11.61□□□□□ -0.55
SPTLC1-206ENST00000482632 Q6ZUG5 572 aa11.61□□□□□ -0.55
SPTLC1-206ENST00000482632 FBXO11Q86XK2 927 aa11.61□□□□□ -0.55
SPTLC1-206ENST00000482632 MAML3Q96JK9 1138 aa11.61□□□□□ -0.55
SPTLC1-206ENST00000482632 MTA3Q9BTC8 594 aa11.61□□□□□ -0.55
SPTLC1-206ENST00000482632 JMJD4Q9H9V9 463 aa11.61□□□□□ -0.55
SPTLC1-206ENST00000482632 GTF3C3Q9Y5Q9 886 aa11.61□□□□□ -0.55
SPTLC1-206ENST00000482632 PFASO15067 1338 aa11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 PALM3A6NDB9 673 aaPredicted RBP11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 GOLGA8AA7E2F4 631 aa11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 GOLGA8BA8MQT2 603 aa11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 NFIBO00712 420 aa11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 EIF5BO60841 1220 aaKnown RBP11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 HOXC6P09630 235 aa11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 RPS6KB1P23443 525 aa11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 CALML3P27482 149 aa11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 CCND3P30281 292 aaPredicted RBP11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 LIFRP42702 1097 aa11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 CNTN2Q02246 1040 aa11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 APOBRQ0VD83 1088 aa11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 TROAPQ12815 778 aa11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 ZNF792Q3KQV3 632 aa11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 PRAMEF19Q5SWL8 479 aa11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 CCDC82Q8N4S0 544 aa11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 BRF1Q92994 677 aa11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 A1CFQ9NQ94 594 aaKnown RBP11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 PNMA2Q9UL42 364 aa11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 CYP46A1Q9Y6A2 500 aa11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 WDR19Q8NEZ3 1342 aa11.6□□□□□ -0.55
SPTLC1-206ENST00000482632 DPYSL4O14531 572 aa11.59□□□□□ -0.55
SPTLC1-206ENST00000482632 ZBTB43O43298 467 aa11.59□□□□□ -0.55
SPTLC1-206ENST00000482632 PLEKHA8P1O95397 391 aa11.59□□□□□ -0.55
SPTLC1-206ENST00000482632 GJB1P08034 283 aa11.59□□□□□ -0.55
SPTLC1-206ENST00000482632 EXOSC10Q01780 885 aaKnown RBP11.59□□□□□ -0.55
SPTLC1-206ENST00000482632 RTN1Q16799 776 aa11.59□□□□□ -0.55
SPTLC1-206ENST00000482632 ANO1Q5XXA6 986 aa11.59□□□□□ -0.55
SPTLC1-206ENST00000482632 OLFML2BQ68BL8 750 aa11.59□□□□□ -0.55
SPTLC1-206ENST00000482632 APOA5Q6Q788 366 aa11.59□□□□□ -0.55
SPTLC1-206ENST00000482632 CMTR1Q8N1G2 835 aaKnown RBP11.59□□□□□ -0.55
SPTLC1-206ENST00000482632 U2AF1L4Q8WU68 220 aaKnown RBP11.59□□□□□ -0.55
SPTLC1-206ENST00000482632 RRP36Q96EU6 259 aaKnown RBP11.59□□□□□ -0.55
SPTLC1-206ENST00000482632 PIGSQ96S52 555 aa11.59□□□□□ -0.55
SPTLC1-206ENST00000482632 UPF3BQ9BZI7 483 aaKnown RBP11.59□□□□□ -0.55
SPTLC1-206ENST00000482632 SEC63Q9UGP8 760 aaKnown RBP11.59□□□□□ -0.55
SPTLC1-206ENST00000482632 ZHX1Q9UKY1 873 aaPredicted RBP11.59□□□□□ -0.55
SPTLC1-206ENST00000482632 CNPY2Q9Y2B0 182 aa11.59□□□□□ -0.55
SPTLC1-206ENST00000482632 ABCB11O95342 1321 aa11.59□□□□□ -0.55
SPTLC1-206ENST00000482632 ZBTB5O15062 677 aa11.58□□□□□ -0.56
SPTLC1-206ENST00000482632 EPB41L2O43491 1005 aaKnown RBP11.58□□□□□ -0.56
SPTLC1-206ENST00000482632 GNAQP50148 359 aa11.58□□□□□ -0.56
SPTLC1-206ENST00000482632 BAATQ14032 418 aaPredicted RBP11.58□□□□□ -0.56
SPTLC1-206ENST00000482632 SLC30A10Q6XR72 485 aa11.58□□□□□ -0.56
SPTLC1-206ENST00000482632 RNF207Q6ZRF8 634 aa11.58□□□□□ -0.56
SPTLC1-206ENST00000482632 KCNB2Q92953 911 aa11.58□□□□□ -0.56
SPTLC1-206ENST00000482632 TINF2Q9BSI4 451 aa11.58□□□□□ -0.56
SPTLC1-206ENST00000482632 AMNQ9BXJ7 453 aa11.58□□□□□ -0.56
SPTLC1-206ENST00000482632 CYP39A1Q9NYL5 469 aa11.58□□□□□ -0.56
SPTLC1-206ENST00000482632 BRPF3Q9ULD4 1205 aa11.58□□□□□ -0.56
SPTLC1-206ENST00000482632 DIS3Q9Y2L1 958 aaKnown RBP11.58□□□□□ -0.56
SPTLC1-206ENST00000482632 MRPL11Q9Y3B7 192 aaKnown RBP11.58□□□□□ -0.56
SPTLC1-206ENST00000482632 DNAJC25-GNG10A0A024R161 153 aa11.57□□□□□ -0.56
SPTLC1-206ENST00000482632 hCG_1642624A0A1W2PR95 340 aa11.57□□□□□ -0.56
SPTLC1-206ENST00000482632 SGPL1O95470 568 aa11.57□□□□□ -0.56
SPTLC1-206ENST00000482632 CFBP00751 764 aa11.57□□□□□ -0.56
SPTLC1-206ENST00000482632 CYBAP13498 195 aa11.57□□□□□ -0.56
SPTLC1-206ENST00000482632 GJA8P48165 433 aa11.57□□□□□ -0.56
SPTLC1-206ENST00000482632 METAP2P50579 478 aaKnown RBP eCLIP11.57□□□□□ -0.56
SPTLC1-206ENST00000482632 NOL8Q76FK4 1167 aaKnown RBP11.57□□□□□ -0.56
SPTLC1-206ENST00000482632 RUFY3Q7L099 469 aa11.57□□□□□ -0.56
SPTLC1-206ENST00000482632 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.57□□□□□ -0.563e-6■□□□□ 8.4
SPTLC1-206ENST00000482632 ARMCX2Q7L311 632 aa11.57□□□□□ -0.56
SPTLC1-206ENST00000482632 SGMS1Q86VZ5 419 aa11.57□□□□□ -0.56
SPTLC1-206ENST00000482632 FANCBQ8NB91 859 aa11.57□□□□□ -0.56
SPTLC1-206ENST00000482632 CLEC4DQ8WXI8 215 aa11.57□□□□□ -0.56
SPTLC1-206ENST00000482632 PURBQ96QR8 312 aaKnown RBP11.57□□□□□ -0.56
SPTLC1-206ENST00000482632 MAP3K14Q99558 947 aa11.57□□□□□ -0.56
SPTLC1-206ENST00000482632 LZTS2Q9BRK4 669 aa11.57□□□□□ -0.56
SPTLC1-206ENST00000482632 PAK6Q9NQU5 681 aaPredicted RBP11.57□□□□□ -0.56
SPTLC1-206ENST00000482632 PDRG1Q9NUG6 133 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms