RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 HABP4Q5JVS0 413 aaKnown RBP19.24■□□□□ 0.67
VAMP4-204ENST00000482519 MCF2L2Q86YR7 1114 aa19.24■□□□□ 0.67
VAMP4-204ENST00000482519 TMTC2Q8N394 836 aa19.24■□□□□ 0.67
VAMP4-204ENST00000482519 CTCFLQ8NI51 663 aaPredicted RBP19.24■□□□□ 0.67
VAMP4-204ENST00000482519 NEK1Q96PY6 1258 aa19.24■□□□□ 0.67
VAMP4-204ENST00000482519 PIGSQ96S52 555 aa19.24■□□□□ 0.67
VAMP4-204ENST00000482519 PHF24Q9UPV7 400 aa19.24■□□□□ 0.67
VAMP4-204ENST00000482519 PCDHA1Q9Y5I3 950 aa19.24■□□□□ 0.67
VAMP4-204ENST00000482519 PPP1R11O60927 126 aaPredicted RBP19.23■□□□□ 0.67
VAMP4-204ENST00000482519 DDAH1O94760 285 aa19.23■□□□□ 0.67
VAMP4-204ENST00000482519 KIF5BP33176 963 aa19.23■□□□□ 0.67
VAMP4-204ENST00000482519 SLC35G1Q2M3R5 365 aa19.23■□□□□ 0.67
VAMP4-204ENST00000482519 GNASQ5JWF2 1037 aa19.23■□□□□ 0.67
VAMP4-204ENST00000482519 RAB11FIP4Q86YS3 637 aa19.23■□□□□ 0.67
VAMP4-204ENST00000482519 RASEFQ8IZ41 740 aa19.23■□□□□ 0.67
VAMP4-204ENST00000482519 RGS22Q8NE09 1264 aa19.23■□□□□ 0.67
VAMP4-204ENST00000482519 MTA3Q9BTC8 594 aa19.23■□□□□ 0.67
VAMP4-204ENST00000482519 VTA1Q9NP79 307 aa19.23■□□□□ 0.67
VAMP4-204ENST00000482519 A0A1W2PQ45 241 aaPredicted RBP19.22■□□□□ 0.67
VAMP4-204ENST00000482519 A0A1W2PQY0 241 aa19.22■□□□□ 0.67
VAMP4-204ENST00000482519 CFBP00751 764 aa19.22■□□□□ 0.67
VAMP4-204ENST00000482519 SMPD1P17405 629 aa19.22■□□□□ 0.67
VAMP4-204ENST00000482519 RXRAP19793 462 aa19.22■□□□□ 0.67
VAMP4-204ENST00000482519 PTGS1P23219 599 aa19.22■□□□□ 0.67
VAMP4-204ENST00000482519 ACLYP53396 1101 aa19.22■□□□□ 0.67
VAMP4-204ENST00000482519 TRIM60Q495X7 471 aa19.22■□□□□ 0.67
VAMP4-204ENST00000482519 ERICH6BQ5W0A0 696 aa19.22■□□□□ 0.67
VAMP4-204ENST00000482519 TAPT1Q6NXT6 567 aa19.22■□□□□ 0.67
VAMP4-204ENST00000482519 VTI1AQ96AJ9 217 aa19.22■□□□□ 0.67
VAMP4-204ENST00000482519 TCEANC2Q96MN5 208 aa19.22■□□□□ 0.67
VAMP4-204ENST00000482519 AP5M1Q9H0R1 490 aa19.22■□□□□ 0.67
VAMP4-204ENST00000482519 RIOX1Q9H6W3 641 aa19.22■□□□□ 0.67
VAMP4-204ENST00000482519 RBM27Q9P2N5 1060 aaKnown RBP19.22■□□□□ 0.67
VAMP4-204ENST00000482519 SLC12A7Q9Y666 1083 aa19.22■□□□□ 0.67
VAMP4-204ENST00000482519 LRRC37A2A6NM11 1700 aa19.21■□□□□ 0.67
VAMP4-204ENST00000482519 B4DLN1 442 aa19.21■□□□□ 0.67
VAMP4-204ENST00000482519 CYTH3O43739 400 aa19.21■□□□□ 0.67
VAMP4-204ENST00000482519 MRPL12P52815 198 aaKnown RBP19.21■□□□□ 0.67
VAMP4-204ENST00000482519 GJA9P57773 515 aa19.21■□□□□ 0.67
VAMP4-204ENST00000482519 BEX3Q00994 111 aa19.21■□□□□ 0.67
VAMP4-204ENST00000482519 ADCK5Q3MIX3 580 aa19.21■□□□□ 0.67
VAMP4-204ENST00000482519 TMEM63BQ5T3F8 832 aa19.21■□□□□ 0.67
VAMP4-204ENST00000482519 IQSEC1Q6DN90 963 aa19.21■□□□□ 0.67
VAMP4-204ENST00000482519 TLK2Q86UE8 772 aa19.21■□□□□ 0.67
VAMP4-204ENST00000482519 KLHDC9Q8NEP7 349 aa19.21■□□□□ 0.67
VAMP4-204ENST00000482519 DNERQ8NFT8 737 aa19.21■□□□□ 0.67
VAMP4-204ENST00000482519 SYTL5Q8TDW5 730 aaPredicted RBP19.21■□□□□ 0.67
VAMP4-204ENST00000482519 MORC4Q8TE76 937 aa19.21■□□□□ 0.67
VAMP4-204ENST00000482519 MTMR8Q96EF0 704 aa19.21■□□□□ 0.67
VAMP4-204ENST00000482519 TAAR1Q96RJ0 339 aa19.21■□□□□ 0.67
VAMP4-204ENST00000482519 TSEN34Q9BSV6 310 aaKnown RBP19.21■□□□□ 0.67
VAMP4-204ENST00000482519 PRDM5Q9NQX1 630 aaPredicted RBP19.21■□□□□ 0.67
VAMP4-204ENST00000482519 PRKAG2Q9UGJ0 569 aa19.21■□□□□ 0.67
VAMP4-204ENST00000482519 PNMA6FA0A0J9YX94 578 aa19.2■□□□□ 0.66
VAMP4-204ENST00000482519 DYNC1LI2O43237 492 aaPredicted RBP19.2■□□□□ 0.66
VAMP4-204ENST00000482519 SLC34A2O95436 690 aa19.2■□□□□ 0.66
VAMP4-204ENST00000482519 LIFRP42702 1097 aa19.2■□□□□ 0.66
VAMP4-204ENST00000482519 KRT32Q14532 448 aa19.2■□□□□ 0.66
VAMP4-204ENST00000482519 SYNE3Q6ZMZ3 975 aa19.2■□□□□ 0.66
VAMP4-204ENST00000482519 CMTR1Q8N1G2 835 aaKnown RBP19.2■□□□□ 0.66
VAMP4-204ENST00000482519 PCSK9Q8NBP7 692 aaKnown RBP19.2■□□□□ 0.66
VAMP4-204ENST00000482519 RMDN3Q96TC7 470 aa19.2■□□□□ 0.66
VAMP4-204ENST00000482519 WDR11Q9BZH6 1224 aa19.2■□□□□ 0.66
VAMP4-204ENST00000482519 UPF3AQ9H1J1 476 aaKnown RBP19.2■□□□□ 0.66
VAMP4-204ENST00000482519 STARD7Q9NQZ5 370 aa19.2■□□□□ 0.66
VAMP4-204ENST00000482519 COL20A1Q9P218 1284 aa19.2■□□□□ 0.66
VAMP4-204ENST00000482519 GNEQ9Y223 722 aaKnown RBP19.2■□□□□ 0.66
VAMP4-204ENST00000482519 LOC102724159A0A0B4J2E5 919 aa19.19■□□□□ 0.66
VAMP4-204ENST00000482519 MOXD2PA6NHM9 499 aa19.19■□□□□ 0.66
VAMP4-204ENST00000482519 REC8O95072 547 aa19.19■□□□□ 0.66
VAMP4-204ENST00000482519 ASGR1P07306 291 aa19.19■□□□□ 0.66
VAMP4-204ENST00000482519 CALM1P0DP23 149 aa19.19■□□□□ 0.66
VAMP4-204ENST00000482519 CALM2P0DP24 149 aa19.19■□□□□ 0.66
VAMP4-204ENST00000482519 CALM3P0DP25 149 aa19.19■□□□□ 0.66
VAMP4-204ENST00000482519 HOXA13P31271 388 aaPredicted RBP19.19■□□□□ 0.66
VAMP4-204ENST00000482519 MAGEA10P43363 369 aaPredicted RBP19.19■□□□□ 0.66
VAMP4-204ENST00000482519 FGD1P98174 961 aa19.19■□□□□ 0.66
VAMP4-204ENST00000482519 TRAF1Q13077 416 aa19.19■□□□□ 0.66
VAMP4-204ENST00000482519 PWP2Q15269 919 aaKnown RBP19.19■□□□□ 0.66
VAMP4-204ENST00000482519 ARHGEF16Q5VV41 709 aa19.19■□□□□ 0.66
VAMP4-204ENST00000482519 CCSAPQ6IQ19 270 aaPredicted RBP19.19■□□□□ 0.66
VAMP4-204ENST00000482519 DHX32Q7L7V1 743 aaKnown RBP19.19■□□□□ 0.66
VAMP4-204ENST00000482519 NSUN6Q8TEA1 469 aaKnown RBP19.19■□□□□ 0.66
VAMP4-204ENST00000482519 RRP36Q96EU6 259 aaKnown RBP19.19■□□□□ 0.66
VAMP4-204ENST00000482519 GLT1D1Q96MS3 346 aa19.19■□□□□ 0.66
VAMP4-204ENST00000482519 MAP3K14Q99558 947 aa19.19■□□□□ 0.66
VAMP4-204ENST00000482519 TRIOBPQ9H2D6 2365 aa19.19■□□□□ 0.66
VAMP4-204ENST00000482519 OPLAHO14841 1288 aa19.18■□□□□ 0.66
VAMP4-204ENST00000482519 PQBP1O60828 265 aaKnown RBP19.18■□□□□ 0.66
VAMP4-204ENST00000482519 PLEKHA8P1O95397 391 aa19.18■□□□□ 0.66
VAMP4-204ENST00000482519 EIF2AK2P19525 551 aaKnown RBP19.18■□□□□ 0.66
VAMP4-204ENST00000482519 CST5P28325 142 aaPredicted RBP19.18■□□□□ 0.66
VAMP4-204ENST00000482519 GNAQP50148 359 aa19.18■□□□□ 0.66
VAMP4-204ENST00000482519 MDM2Q00987 491 aaPredicted RBP19.18■□□□□ 0.66
VAMP4-204ENST00000482519 TLE2Q04725 743 aa19.18■□□□□ 0.66
VAMP4-204ENST00000482519 FSCN1Q16658 493 aaKnown RBP19.18■□□□□ 0.66
VAMP4-204ENST00000482519 TSGA10IPQ3SY00 556 aa19.18■□□□□ 0.66
VAMP4-204ENST00000482519 MICU3Q86XE3 530 aa19.18■□□□□ 0.66
VAMP4-204ENST00000482519 CCDC82Q8N4S0 544 aa19.18■□□□□ 0.66
VAMP4-204ENST00000482519 LZTS2Q9BRK4 669 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms