RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 PABPC4Q13310 644 aaKnown RBP eCLIP10.17□□□□□ -0.78
CALD1-220ENST00000482470 RDH13Q8NBN7 331 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 PANX2Q96RD6 677 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 RABEP2Q9H5N1 569 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 ABHD10Q9NUJ1 306 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 TRIM10Q9UDY6 481 aa10.17□□□□□ -0.78
CALD1-220ENST00000482470 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.17□□□□□ -0.78
CALD1-220ENST00000482470 PPP1R3GB7ZBB8 358 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 USP17L10C9JJH3 530 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 NDUFA10O95299 355 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 SLURP2P0DP57 97 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 CXCR5P32302 372 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 ICA1Q05084 483 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 CPXCR1Q8N123 301 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 FNBP4Q8N3X1 1017 aaPredicted RBP10.16□□□□□ -0.78
CALD1-220ENST00000482470 MB21D1Q8N884 522 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 RGS22Q8NE09 1264 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 IFT81Q8WYA0 676 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 DDX41Q9UJV9 622 aaKnown RBP10.16□□□□□ -0.78
CALD1-220ENST00000482470 SAR1BQ9Y6B6 198 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 AFDNP55196 1824 aaKnown RBP10.16□□□□□ -0.78
CALD1-220ENST00000482470 SP4Q02446 784 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 STK4Q13043 487 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 SBK1Q52WX2 424 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 REXO1L1PQ8IX06 675 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 MYOCDQ8IZQ8 938 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 TBC1D16Q8TBP0 767 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 PANK4Q9NVE7 773 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 PCDHB13Q9Y5F0 798 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 FLT1P17948 1338 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 MMP10P09238 476 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 CCNE1P24864 410 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 CKAP4Q07065 602 aaKnown RBP10.16□□□□□ -0.78
CALD1-220ENST00000482470 FAM26FQ5R3K3 315 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 BARGINQ6ZT62 677 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 SRGAP1Q7Z6B7 1085 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 TXLNBQ8N3L3 684 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 NEDD1Q8NHV4 660 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 KIFC2Q96AC6 838 aa10.16□□□□□ -0.78
CALD1-220ENST00000482470 FAM13AO94988 1023 aa10.15□□□□□ -0.78
CALD1-220ENST00000482470 PNMA6AP0CW24 399 aaPredicted RBP10.15□□□□□ -0.78
CALD1-220ENST00000482470 CAPN2P17655 700 aa10.15□□□□□ -0.78
CALD1-220ENST00000482470 HOXA13P31271 388 aaPredicted RBP10.15□□□□□ -0.78
CALD1-220ENST00000482470 TPH2Q8IWU9 490 aa10.15□□□□□ -0.78
CALD1-220ENST00000482470 NUP58Q9BVL2 599 aa10.15□□□□□ -0.78
CALD1-220ENST00000482470 HDAC6Q9UBN7 1215 aa10.15□□□□□ -0.78
CALD1-220ENST00000482470 MAD2L2Q9UI95 211 aa10.15□□□□□ -0.78
CALD1-220ENST00000482470 H0YIN7 160 aa10.15□□□□□ -0.78
CALD1-220ENST00000482470 CETN3O15182 167 aa10.15□□□□□ -0.78
CALD1-220ENST00000482470 GYPCP04921 128 aa10.15□□□□□ -0.78
CALD1-220ENST00000482470 POLR2FP61218 127 aaKnown RBP10.15□□□□□ -0.78
CALD1-220ENST00000482470 HDXQ7Z353 690 aa10.15□□□□□ -0.78
CALD1-220ENST00000482470 HOMER2Q9NSB8 354 aa10.15□□□□□ -0.78
CALD1-220ENST00000482470 INTS13Q9NVM9 706 aa10.15□□□□□ -0.78
CALD1-220ENST00000482470 CWC15Q9P013 229 aaKnown RBP10.15□□□□□ -0.78
CALD1-220ENST00000482470 STXBP3O00186 592 aa10.15□□□□□ -0.78
CALD1-220ENST00000482470 TFRCP02786 760 aaKnown RBP10.15□□□□□ -0.78
CALD1-220ENST00000482470 EEF1GP26641 437 aaKnown RBP10.15□□□□□ -0.78
CALD1-220ENST00000482470 KLK7P49862 253 aa10.15□□□□□ -0.78
CALD1-220ENST00000482470 SLC10A5Q5PT55 438 aa10.15□□□□□ -0.78
CALD1-220ENST00000482470 KRT26Q7Z3Y9 468 aa10.15□□□□□ -0.78
CALD1-220ENST00000482470 VPS36Q86VN1 386 aa10.15□□□□□ -0.78
CALD1-220ENST00000482470 DDX12PQ92771 950 aa10.15□□□□□ -0.78
CALD1-220ENST00000482470 DHTKD1Q96HY7 919 aaPredicted RBP10.15□□□□□ -0.78
CALD1-220ENST00000482470 GJD4Q96KN9 370 aaPredicted RBP10.15□□□□□ -0.78
CALD1-220ENST00000482470 DNM3Q9UQ16 869 aa10.15□□□□□ -0.78
CALD1-220ENST00000482470 DAGLAQ9Y4D2 1042 aa10.15□□□□□ -0.78
CALD1-220ENST00000482470 AFF2P51816 1311 aa10.15□□□□□ -0.79
CALD1-220ENST00000482470 A0A0U1RQJ8 604 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 GCNT3O95395 438 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 ALDH1B1P30837 517 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 IRX5P78411 483 aaPredicted RBP10.14□□□□□ -0.79
CALD1-220ENST00000482470 MDM2Q00987 491 aaPredicted RBP10.14□□□□□ -0.79
CALD1-220ENST00000482470 VPS72Q15906 364 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 LONRF2Q1L5Z9 754 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 TBC1D10BQ4KMP7 808 aaPredicted RBP10.14□□□□□ -0.79
CALD1-220ENST00000482470 ASPRV1Q53RT3 343 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 ANKRD40Q6AI12 368 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 ATRIPQ8WXE1 791 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 AK8Q96MA6 479 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 LSM14BQ9BX40 385 aaKnown RBP10.14□□□□□ -0.79
CALD1-220ENST00000482470 HAUS4Q9H6D7 363 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 AGPAT5Q9NUQ2 364 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 BCCIPQ9P287 314 aaKnown RBP eCLIP10.14□□□□□ -0.79
CALD1-220ENST00000482470 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.14□□□□□ -0.79
CALD1-220ENST00000482470 E9PMD0 336 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 PPIP5K2O43314 1243 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 ODF2Q5BJF6 829 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 RCSD1Q6JBY9 416 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 CCDC84Q86UT8 332 aaPredicted RBP10.14□□□□□ -0.79
CALD1-220ENST00000482470 ZNF384Q8TF68 577 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 RABGGTAQ92696 567 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 PDE11AQ9HCR9 933 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 SH3GLB2Q9NR46 395 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 POLLQ9UGP5 575 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 TRPC5Q9UL62 973 aaPredicted RBP10.14□□□□□ -0.79
CALD1-220ENST00000482470 LAD1O00515 517 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 RASSF7Q02833 373 aa10.14□□□□□ -0.79
CALD1-220ENST00000482470 RC3H1Q5TC82 1133 aaKnown RBP10.14□□□□□ -0.79
CALD1-220ENST00000482470 TRIM9Q9C026 710 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms