RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 NOX5Q96PH1 765 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 NUP58Q9BVL2 599 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 ITIH6Q6UXX5 1313 aa14.1□□□□□ -0.15
VPS52-218ENST00000482399 PSMD14O00487 310 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 CLSTN1O94985 981 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 SEC24CP53992 1094 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 AMPD2Q01433 879 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 IFFO1Q0D2I5 559 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 PPP2R5BQ15173 497 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 SV2BQ7L1I2 683 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 SH3RF1Q7Z6J0 888 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 SCLT1Q96NL6 688 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 SPAG5Q96R06 1193 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 OSBPL9Q96SU4 736 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 TSG101Q99816 390 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 CHD2O14647 1828 aaKnown RBP14.09□□□□□ -0.15
VPS52-218ENST00000482399 SMCO2A6NFE2 343 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 CEP104O60308 925 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 NAA35Q5VZE5 725 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 WDR93Q6P2C0 686 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 IRF2BP1Q8IU81 584 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 TGFBRAP1Q8WUH2 860 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 GJA10Q969M2 543 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 RPGRIP1Q96KN7 1286 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 CDHR2Q9BYE9 1310 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 RIC1Q4ADV7 1423 aa14.09□□□□□ -0.15
VPS52-218ENST00000482399 USP8P40818 1118 aa14.08□□□□□ -0.15
VPS52-218ENST00000482399 USP17L2Q6R6M4 530 aa14.08□□□□□ -0.15
VPS52-218ENST00000482399 JPH2Q9BR39 696 aaPredicted RBP14.08□□□□□ -0.15
VPS52-218ENST00000482399 TSGA10Q9BZW7 698 aa14.08□□□□□ -0.15
VPS52-218ENST00000482399 LUC7LQ9NQ29 371 aaKnown RBP14.08□□□□□ -0.15
VPS52-218ENST00000482399 RBM12Q9NTZ6 932 aaKnown RBP14.08□□□□□ -0.15
VPS52-218ENST00000482399 ABCC6O95255 1503 aa14.08□□□□□ -0.15
VPS52-218ENST00000482399 KCNK3O14649 394 aa14.08□□□□□ -0.16
VPS52-218ENST00000482399 CCNE1P24864 410 aa14.08□□□□□ -0.16
VPS52-218ENST00000482399 CARSP49589 748 aaKnown RBP14.08□□□□□ -0.16
VPS52-218ENST00000482399 MECOMQ03112 1051 aa14.08□□□□□ -0.16
VPS52-218ENST00000482399 DIXDC1Q155Q3 683 aa14.08□□□□□ -0.16
VPS52-218ENST00000482399 KIAA0753Q2KHM9 967 aa14.08□□□□□ -0.16
VPS52-218ENST00000482399 CFAP221Q4G0U5 840 aa14.08□□□□□ -0.16
VPS52-218ENST00000482399 NDST4Q9H3R1 872 aa14.08□□□□□ -0.16
VPS52-218ENST00000482399 STIM2Q9P246 746 aa14.08□□□□□ -0.16
VPS52-218ENST00000482399 ADAMTS1Q9UHI8 967 aa14.08□□□□□ -0.16
VPS52-218ENST00000482399 SNX12Q9UMY4 172 aa14.08□□□□□ -0.16
VPS52-218ENST00000482399 PCDHA4Q9UN74 947 aa14.08□□□□□ -0.16
VPS52-218ENST00000482399 NKRFO15226 690 aaKnown RBP eCLIP14.08□□□□□ -0.16
VPS52-218ENST00000482399 CYP19A1P11511 503 aaPredicted RBP14.08□□□□□ -0.16
VPS52-218ENST00000482399 KLRK1P26718 216 aa14.08□□□□□ -0.16
VPS52-218ENST00000482399 SLC1A4P43007 532 aa14.08□□□□□ -0.16
VPS52-218ENST00000482399 PFKFB3Q16875 520 aaPredicted RBP14.08□□□□□ -0.16
VPS52-218ENST00000482399 IFT20Q8IY31 132 aa14.08□□□□□ -0.16
VPS52-218ENST00000482399 SNX29Q8TEQ0 813 aa14.08□□□□□ -0.16
VPS52-218ENST00000482399 CCDC114Q96M63 670 aa14.08□□□□□ -0.16
VPS52-218ENST00000482399 PLA2G12BQ9BX93 195 aa14.08□□□□□ -0.16
VPS52-218ENST00000482399 BMP2KQ9NSY1 1161 aaPredicted RBP14.08□□□□□ -0.16
VPS52-218ENST00000482399 MED1Q15648 1581 aaPredicted RBP14.07□□□□□ -0.16
VPS52-218ENST00000482399 C1orf167Q5SNV9 1468 aa14.07□□□□□ -0.16
VPS52-218ENST00000482399 FRMPD2Q68DX3 1309 aaPredicted RBP14.07□□□□□ -0.16
VPS52-218ENST00000482399 CNTNAP5Q8WYK1 1306 aa14.07□□□□□ -0.16
VPS52-218ENST00000482399 KLRF2D3W0D1 207 aa14.07□□□□□ -0.16
VPS52-218ENST00000482399 MYO1FO00160 1098 aa14.07□□□□□ -0.16
VPS52-218ENST00000482399 OR52Z1P0C646 297 aa14.07□□□□□ -0.16
VPS52-218ENST00000482399 CNNM4Q6P4Q7 775 aa14.07□□□□□ -0.16
VPS52-218ENST00000482399 UHMK1Q8TAS1 419 aaKnown RBP14.07□□□□□ -0.16
VPS52-218ENST00000482399 KDM3BQ7LBC6 1761 aa14.07□□□□□ -0.16
VPS52-218ENST00000482399 PLEKHG2Q9H7P9 1386 aa14.07□□□□□ -0.16
VPS52-218ENST00000482399 DDAH1O94760 285 aa14.07□□□□□ -0.16
VPS52-218ENST00000482399 TCP1P17987 556 aaKnown RBP14.07□□□□□ -0.16
VPS52-218ENST00000482399 OR2W6PQ8NHA6 318 aa14.07□□□□□ -0.16
VPS52-218ENST00000482399 TBC1D5Q92609 795 aa14.07□□□□□ -0.16
VPS52-218ENST00000482399 AP1M1Q9BXS5 423 aa14.07□□□□□ -0.16
VPS52-218ENST00000482399 THAP9Q9H5L6 903 aa14.07□□□□□ -0.16
VPS52-218ENST00000482399 GPCPD1Q9NPB8 672 aa14.07□□□□□ -0.16
VPS52-218ENST00000482399 CRYBG1Q9Y4K1 1723 aa14.07□□□□□ -0.16
VPS52-218ENST00000482399 POTEMA6NI47 508 aa14.07□□□□□ -0.16
VPS52-218ENST00000482399 EPHB6O15197 1021 aa14.07□□□□□ -0.16
VPS52-218ENST00000482399 NONOQ15233 471 aaKnown RBP eCLIP14.07□□□□□ -0.16
VPS52-218ENST00000482399 TMEM266Q2M3C6 531 aa14.07□□□□□ -0.16
VPS52-218ENST00000482399 DCAF17Q5H9S7 520 aaPredicted RBP14.07□□□□□ -0.16
VPS52-218ENST00000482399 ELOA2Q8IYF1 753 aaPredicted RBP14.07□□□□□ -0.16
VPS52-218ENST00000482399 TSEN2Q8NCE0 465 aaKnown RBP14.07□□□□□ -0.16
VPS52-218ENST00000482399 GIMAP7Q8NHV1 300 aa14.07□□□□□ -0.16
VPS52-218ENST00000482399 GPR101Q96P66 508 aaPredicted RBP14.07□□□□□ -0.16
VPS52-218ENST00000482399 LSM14BQ9BX40 385 aaKnown RBP14.07□□□□□ -0.16
VPS52-218ENST00000482399 DCP1AQ9NPI6 582 aaPredicted RBP14.07□□□□□ -0.16
VPS52-218ENST00000482399 F8W031 263 aaPredicted RBP14.06□□□□□ -0.16
VPS52-218ENST00000482399 SRGNP10124 158 aa14.06□□□□□ -0.16
VPS52-218ENST00000482399 EPHB4P54760 987 aa14.06□□□□□ -0.16
VPS52-218ENST00000482399 CT47A1Q5JQC4 288 aaPredicted RBP14.06□□□□□ -0.16
VPS52-218ENST00000482399 FGFR2P21802 821 aa14.06□□□□□ -0.16
VPS52-218ENST00000482399 HIBADHP31937 336 aaKnown RBP14.06□□□□□ -0.16
VPS52-218ENST00000482399 IKQ13123 557 aaPredicted RBP14.06□□□□□ -0.16
VPS52-218ENST00000482399 PICALMQ13492 652 aa14.06□□□□□ -0.16
VPS52-218ENST00000482399 LLGL1Q15334 1064 aa14.06□□□□□ -0.16
VPS52-218ENST00000482399 SLC9C1Q4G0N8 1177 aa14.06□□□□□ -0.16
VPS52-218ENST00000482399 TBCKQ8TEA7 893 aa14.06□□□□□ -0.16
VPS52-218ENST00000482399 DPH5Q9H2P9 285 aa14.06□□□□□ -0.16
VPS52-218ENST00000482399 TMEM260Q9NX78 707 aa14.06□□□□□ -0.16
VPS52-218ENST00000482399 SPATA31A3Q5VYP0 1347 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 GOLGA8KD6RF30 607 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms