RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 KLHDC9Q8NEP7 349 aa13.82□□□□□ -0.2
HMGN1-213ENST00000482192 CTCFLQ8NI51 663 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-213ENST00000482192 MTMR8Q96EF0 704 aa13.82□□□□□ -0.2
HMGN1-213ENST00000482192 MAP3K14Q99558 947 aa13.82□□□□□ -0.2
HMGN1-213ENST00000482192 UPF3AQ9H1J1 476 aaKnown RBP13.82□□□□□ -0.2
HMGN1-213ENST00000482192 PRO3102Q9H379 93 aa13.82□□□□□ -0.2
HMGN1-213ENST00000482192 RBM27Q9P2N5 1060 aaKnown RBP13.82□□□□□ -0.2
HMGN1-213ENST00000482192 DDX49Q9Y6V7 483 aaKnown RBP13.82□□□□□ -0.2
HMGN1-213ENST00000482192 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.81□□□□□ -0.2
HMGN1-213ENST00000482192 A0A1W2PQ45 241 aaPredicted RBP13.81□□□□□ -0.2
HMGN1-213ENST00000482192 A0A1W2PQY0 241 aa13.81□□□□□ -0.2
HMGN1-213ENST00000482192 MYADML2A6NDP7 307 aa13.81□□□□□ -0.2
HMGN1-213ENST00000482192 CCDC69A6NI79 296 aa13.81□□□□□ -0.2
HMGN1-213ENST00000482192 SH2B2O14492 632 aaPredicted RBP13.81□□□□□ -0.2
HMGN1-213ENST00000482192 KIF5BP33176 963 aa13.81□□□□□ -0.2
HMGN1-213ENST00000482192 LIFRP42702 1097 aa13.81□□□□□ -0.2
HMGN1-213ENST00000482192 NKX3-2P78367 333 aa13.81□□□□□ -0.2
HMGN1-213ENST00000482192 PDE4DQ08499 809 aa13.81□□□□□ -0.2
HMGN1-213ENST00000482192 IQSEC1Q6DN90 963 aa13.81□□□□□ -0.2
HMGN1-213ENST00000482192 CCSAPQ6IQ19 270 aaPredicted RBP13.81□□□□□ -0.2
HMGN1-213ENST00000482192 TAPT1Q6NXT6 567 aa13.81□□□□□ -0.2
HMGN1-213ENST00000482192 NFXL1Q6ZNB6 911 aa13.81□□□□□ -0.2
HMGN1-213ENST00000482192 HOMER1Q86YM7 354 aa13.81□□□□□ -0.2
HMGN1-213ENST00000482192 NUP133Q8WUM0 1156 aa13.81□□□□□ -0.2
HMGN1-213ENST00000482192 RIOX1Q9H6W3 641 aa13.81□□□□□ -0.2
HMGN1-213ENST00000482192 PRKAG2Q9UGJ0 569 aa13.81□□□□□ -0.2
HMGN1-213ENST00000482192 ATP11BQ9Y2G3 1177 aa13.81□□□□□ -0.2
HMGN1-213ENST00000482192 LCTP09848 1927 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 A0A1W2PPC1 479 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 CALM1P0DP23 149 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 CALM2P0DP24 149 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 CALM3P0DP25 149 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 SMPD1P17405 629 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 EDNRBP24530 442 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 KRT32Q14532 448 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 KCNA10Q16322 511 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 TSGA10IPQ3SY00 556 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 TRIM60Q495X7 471 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 GNASQ5JWF2 1037 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 TLK2Q86UE8 772 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 GLT1D1Q96MS3 346 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 NEK1Q96PY6 1258 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 PIGSQ96S52 555 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 MYL10Q9BUA6 226 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 AP5M1Q9H0R1 490 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 GPHNQ9NQX3 736 aaPredicted RBP13.8□□□□□ -0.2
HMGN1-213ENST00000482192 STARD7Q9NQZ5 370 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 PDGFCQ9NRA1 345 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 PPP4R2Q9NY27 417 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 GNEQ9Y223 722 aaKnown RBP13.8□□□□□ -0.2
HMGN1-213ENST00000482192 Q9Y3F1 56 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 PCDHA1Q9Y5I3 950 aa13.8□□□□□ -0.2
HMGN1-213ENST00000482192 CYTH3O43739 400 aa13.79□□□□□ -0.2
HMGN1-213ENST00000482192 PPP1R11O60927 126 aaPredicted RBP13.79□□□□□ -0.2
HMGN1-213ENST00000482192 ASGR1P07306 291 aa13.79□□□□□ -0.2
HMGN1-213ENST00000482192 MAGEA10P43363 369 aaPredicted RBP13.79□□□□□ -0.2
HMGN1-213ENST00000482192 SLC35G1Q2M3R5 365 aa13.79□□□□□ -0.2
HMGN1-213ENST00000482192 SYTL5Q8TDW5 730 aaPredicted RBP13.79□□□□□ -0.2
HMGN1-213ENST00000482192 NSUN6Q8TEA1 469 aaKnown RBP13.79□□□□□ -0.2
HMGN1-213ENST00000482192 GDF15Q99988 308 aa13.79□□□□□ -0.2
HMGN1-213ENST00000482192 LZTS2Q9BRK4 669 aa13.79□□□□□ -0.2
HMGN1-213ENST00000482192 MAP3K20Q9NYL2 800 aaKnown RBP13.79□□□□□ -0.2
HMGN1-213ENST00000482192 SLC12A7Q9Y666 1083 aa13.79□□□□□ -0.2
HMGN1-213ENST00000482192 PNMA6FA0A0J9YX94 578 aa13.78□□□□□ -0.2
HMGN1-213ENST00000482192 RBM47A0AV96 593 aaKnown RBP13.78□□□□□ -0.2
HMGN1-213ENST00000482192 CTAGE5O15320 804 aa13.78□□□□□ -0.2
HMGN1-213ENST00000482192 REC8O95072 547 aa13.78□□□□□ -0.2
HMGN1-213ENST00000482192 CFBP00751 764 aa13.78□□□□□ -0.2
HMGN1-213ENST00000482192 SMARCA1P28370 1054 aa13.78□□□□□ -0.2
HMGN1-213ENST00000482192 BMP8BP34820 402 aa13.78□□□□□ -0.2
HMGN1-213ENST00000482192 GNAQP50148 359 aa13.78□□□□□ -0.2
HMGN1-213ENST00000482192 HSD17B4P51659 736 aa13.78□□□□□ -0.2
HMGN1-213ENST00000482192 IRX5P78411 483 aaPredicted RBP13.78□□□□□ -0.2
HMGN1-213ENST00000482192 GHRHRQ02643 423 aa13.78□□□□□ -0.2
HMGN1-213ENST00000482192 COL9A3Q14050 684 aaPredicted RBP13.78□□□□□ -0.2
HMGN1-213ENST00000482192 FSCN1Q16658 493 aaKnown RBP13.78□□□□□ -0.2
HMGN1-213ENST00000482192 DUSP28Q4G0W2 176 aa13.78□□□□□ -0.2
HMGN1-213ENST00000482192 SAMD3Q8N6K7 520 aa13.78□□□□□ -0.2
HMGN1-213ENST00000482192 SCFD2Q8WU76 684 aa13.78□□□□□ -0.2
HMGN1-213ENST00000482192 TBC1D5Q92609 795 aa13.78□□□□□ -0.2
HMGN1-213ENST00000482192 RMDN3Q96TC7 470 aa13.78□□□□□ -0.2
HMGN1-213ENST00000482192 LBHD1Q9BQE6 289 aaPredicted RBP13.78□□□□□ -0.2
HMGN1-213ENST00000482192 SPZ1Q9BXG8 430 aa13.78□□□□□ -0.2
HMGN1-213ENST00000482192 WDR11Q9BZH6 1224 aa13.78□□□□□ -0.2
HMGN1-213ENST00000482192 COL20A1Q9P218 1284 aa13.78□□□□□ -0.2
HMGN1-213ENST00000482192 ELP1O95163 1332 aa13.78□□□□□ -0.2
HMGN1-213ENST00000482192 MCM3APO60318 1980 aa13.78□□□□□ -0.2
HMGN1-213ENST00000482192 OPLAHO14841 1288 aa13.77□□□□□ -0.21
HMGN1-213ENST00000482192 DYNC1LI2O43237 492 aaPredicted RBP13.77□□□□□ -0.21
HMGN1-213ENST00000482192 ZEB2O60315 1214 aa13.77□□□□□ -0.21
HMGN1-213ENST00000482192 SLC34A2O95436 690 aa13.77□□□□□ -0.21
HMGN1-213ENST00000482192 HMGB1P09429 215 aaKnown RBP13.77□□□□□ -0.21
HMGN1-213ENST00000482192 BEX3Q00994 111 aa13.77□□□□□ -0.21
HMGN1-213ENST00000482192 TLE2Q04725 743 aa13.77□□□□□ -0.21
HMGN1-213ENST00000482192 ARHGEF16Q5VV41 709 aa13.77□□□□□ -0.21
HMGN1-213ENST00000482192 DHX32Q7L7V1 743 aaKnown RBP13.77□□□□□ -0.21
HMGN1-213ENST00000482192 ANKRD33Q7Z3H0 272 aa13.77□□□□□ -0.21
HMGN1-213ENST00000482192 SGMS1Q86VZ5 419 aa13.77□□□□□ -0.21
HMGN1-213ENST00000482192 RASEFQ8IZ41 740 aa13.77□□□□□ -0.21
HMGN1-213ENST00000482192 RRP36Q96EU6 259 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms