RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-222	ENST00000482096	SYNRG	Q9UMZ2	1314 aa		10.27	□□□□□ -0.77
UBE2F-222	ENST00000482096	BAZ2A	Q9UIF9	1905 aa	Known RBP	10.27	□□□□□ -0.77
UBE2F-222	ENST00000482096	PARP14	Q460N5	1801 aa		10.26	□□□□□ -0.77
UBE2F-222	ENST00000482096	IGKV6D-41	A0A0C4DH26	115 aa		10.26	□□□□□ -0.77
UBE2F-222	ENST00000482096	DCDC2C	A8MYV0	355 aa		10.26	□□□□□ -0.77
UBE2F-222	ENST00000482096	SMARCA5	O60264	1052 aa	Predicted RBP	10.26	□□□□□ -0.77
UBE2F-222	ENST00000482096	ZBED4	O75132	1171 aa		10.26	□□□□□ -0.77
UBE2F-222	ENST00000482096	DUSP11	O75319	330 aa	Known RBP	10.26	□□□□□ -0.77
UBE2F-222	ENST00000482096	CST5	P28325	142 aa	Predicted RBP	10.26	□□□□□ -0.77
UBE2F-222	ENST00000482096	FPGS	Q05932	587 aa		10.26	□□□□□ -0.77
UBE2F-222	ENST00000482096	KCNA10	Q16322	511 aa		10.26	□□□□□ -0.77
UBE2F-222	ENST00000482096	KBTBD3	Q8NAB2	608 aa		10.26	□□□□□ -0.77
UBE2F-222	ENST00000482096	OSBP2	Q969R2	916 aa		10.26	□□□□□ -0.77
UBE2F-222	ENST00000482096	MKL1	Q969V6	931 aa		10.26	□□□□□ -0.77
UBE2F-222	ENST00000482096	THAP11	Q96EK4	314 aa		10.26	□□□□□ -0.77
UBE2F-222	ENST00000482096	ECHDC1	Q9NTX5	307 aa		10.26	□□□□□ -0.77
UBE2F-222	ENST00000482096	CLIP2	Q9UDT6	1046 aa		10.26	□□□□□ -0.77
UBE2F-222	ENST00000482096	ZNFX1	Q9P2E3	1918 aa	Known RBP	10.26	□□□□□ -0.77
UBE2F-222	ENST00000482096	ELP1	O95163	1332 aa		10.26	□□□□□ -0.77
UBE2F-222	ENST00000482096	LAMA2	P24043	3122 aa	Known RBP	10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	MINDY4B	A8MYZ0	360 aa		10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	LILRB3	O75022	631 aa		10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	TIMP1	P01033	207 aa		10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	FOSL2	P15408	326 aa		10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	CDK7	P50613	346 aa		10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	ACVR2B	Q13705	512 aa		10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	BRICD5	Q6PL45	260 aa		10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	CPXCR1	Q8N123	301 aa		10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	STK11IP	Q8N1F8	1099 aa		10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	CHST13	Q8NET6	341 aa		10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	APPBP2	Q92624	585 aa		10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	ABHD16B	Q9H3Z7	469 aa		10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	SLC38A10	Q9HBR0	1119 aa		10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	RAVER2	Q9HCJ3	691 aa	Known RBP	10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	ZHX1	Q9UKY1	873 aa	Predicted RBP	10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	TBX21	Q9UL17	535 aa		10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	SYNPO2	Q9UMS6	1093 aa		10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	COL11A1	P12107	1806 aa	Predicted RBP	10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	UNC80	Q8N2C7	3258 aa		10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	MYH8	P13535	1937 aa		10.25	□□□□□ -0.77
UBE2F-222	ENST00000482096	MYADML2	A6NDP7	307 aa		10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	RNF113A	O15541	343 aa	Known RBP	10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	ADCY6	O43306	1168 aa		10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	GNAT2	P19087	354 aa		10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	OAZ1	P54368	228 aa		10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	GJA9	P57773	515 aa		10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	MFSD5	Q6N075	450 aa		10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	ZNF444	Q8N0Y2	327 aa	Predicted RBP	10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	ANKRD35	Q8N283	1001 aa		10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	PCSK9	Q8NBP7	692 aa	Known RBP	10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	KIFC2	Q96AC6	838 aa		10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	FGD4	Q96M96	766 aa		10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	GLT1D1	Q96MS3	346 aa		10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	SPSB2	Q99619	263 aa		10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	UPF3A	Q9H1J1	476 aa	Known RBP	10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	ZNF287	Q9HBT7	754 aa		10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	MTMR4	Q9NYA4	1195 aa		10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	FBXO40	Q9UH90	709 aa		10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	FEM1B	Q9UK73	627 aa		10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	CTDP1	Q9Y5B0	961 aa	Predicted RBP	10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	MROH7	Q68CQ1	1323 aa		10.24	□□□□□ -0.77
UBE2F-222	ENST00000482096	GREB1L	Q9C091	1923 aa	Predicted RBP	10.23	□□□□□ -0.77
UBE2F-222	ENST00000482096	PATL2	C9JE40	543 aa	Known RBP	10.23	□□□□□ -0.77
UBE2F-222	ENST00000482096	GPAA1	O43292	621 aa		10.23	□□□□□ -0.77
UBE2F-222	ENST00000482096	TTLL1	O95922	423 aa		10.23	□□□□□ -0.77
UBE2F-222	ENST00000482096	ASGR1	P07306	291 aa		10.23	□□□□□ -0.77
UBE2F-222	ENST00000482096	ZFY	P08048	801 aa	Predicted RBP	10.23	□□□□□ -0.77
UBE2F-222	ENST00000482096	C6orf222	P0C671	652 aa	Predicted RBP	10.23	□□□□□ -0.77
UBE2F-222	ENST00000482096	NKX3-2	P78367	333 aa		10.23	□□□□□ -0.77
UBE2F-222	ENST00000482096	KCNC4	Q03721	635 aa		10.23	□□□□□ -0.77
UBE2F-222	ENST00000482096	GRIN2C	Q14957	1233 aa		10.23	□□□□□ -0.77
UBE2F-222	ENST00000482096	CCDC144B	Q3MJ40	725 aa		10.23	□□□□□ -0.77
UBE2F-222	ENST00000482096	ARMCX2	Q7L311	632 aa		10.23	□□□□□ -0.77
UBE2F-222	ENST00000482096	GMCL1P1	Q8NEA9	526 aa		10.23	□□□□□ -0.77
UBE2F-222	ENST00000482096	CEP95	Q96GE4	821 aa		10.23	□□□□□ -0.77
UBE2F-222	ENST00000482096	SPC25	Q9HBM1	224 aa		10.23	□□□□□ -0.77
UBE2F-222	ENST00000482096	RCAN3	Q9UKA8	241 aa		10.23	□□□□□ -0.77
UBE2F-222	ENST00000482096	PLXNA1	Q9UIW2	1896 aa		10.22	□□□□□ -0.77
UBE2F-222	ENST00000482096		A0A0U1RQG5	324 aa	Predicted RBP	10.22	□□□□□ -0.77
UBE2F-222	ENST00000482096	ARVCF	O00192	962 aa		10.22	□□□□□ -0.77
UBE2F-222	ENST00000482096	CTAGE5	O15320	804 aa		10.22	□□□□□ -0.77
UBE2F-222	ENST00000482096	PRDM1	O75626	825 aa		10.22	□□□□□ -0.77
UBE2F-222	ENST00000482096	ADH1B	P00325	375 aa		10.22	□□□□□ -0.77
UBE2F-222	ENST00000482096	BMP3	P12645	472 aa		10.22	□□□□□ -0.77
UBE2F-222	ENST00000482096	TDO2	P48775	406 aa		10.22	□□□□□ -0.77
UBE2F-222	ENST00000482096	PPIG	Q13427	754 aa	Known RBP eCLIP	10.22	□□□□□ -0.77
UBE2F-222	ENST00000482096	GNAS	Q5JWF2	1037 aa		10.22	□□□□□ -0.77
UBE2F-222	ENST00000482096	TMEM240	Q5SV17	173 aa		10.22	□□□□□ -0.77
UBE2F-222	ENST00000482096	C20orf194	Q5TEA3	1177 aa		10.22	□□□□□ -0.77
UBE2F-222	ENST00000482096	RASIP1	Q5U651	963 aa		10.22	□□□□□ -0.77
UBE2F-222	ENST00000482096	CCDC174	Q6PII3	467 aa		10.22	□□□□□ -0.77
UBE2F-222	ENST00000482096	C16orf59	Q7L2K0	433 aa		10.22	□□□□□ -0.77
UBE2F-222	ENST00000482096	RETREG3	Q86VR2	466 aa		10.22	□□□□□ -0.77
UBE2F-222	ENST00000482096	FAM126B	Q8IXS8	530 aa		10.22	□□□□□ -0.77
UBE2F-222	ENST00000482096	CCDC144CP	Q8IYA2	1237 aa		10.22	□□□□□ -0.77
UBE2F-222	ENST00000482096	IFNL3	Q8IZI9	196 aa		10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms