RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 MUM1L1Q5H9M0 696 aa13.3□□□□□ -0.28
HPS4-212ENST00000481910 WDR78Q5VTH9 848 aa13.3□□□□□ -0.28
HPS4-212ENST00000481910 CHST13Q8NET6 341 aa13.3□□□□□ -0.28
HPS4-212ENST00000481910 CCDC148Q8NFR7 591 aa13.3□□□□□ -0.28
HPS4-212ENST00000481910 C8orf76Q96K31 380 aa13.3□□□□□ -0.28
HPS4-212ENST00000481910 IPO9Q96P70 1041 aaKnown RBP13.3□□□□□ -0.28
HPS4-212ENST00000481910 PORCNQ9H237 461 aa13.3□□□□□ -0.28
HPS4-212ENST00000481910 SAGE1Q9NXZ1 904 aa13.3□□□□□ -0.28
HPS4-212ENST00000481910 SMCO2A6NFE2 343 aa13.29□□□□□ -0.28
HPS4-212ENST00000481910 PDCP20941 246 aa13.29□□□□□ -0.28
HPS4-212ENST00000481910 COPB2P35606 906 aa13.29□□□□□ -0.28
HPS4-212ENST00000481910 MROH8Q9H579 483 aa13.29□□□□□ -0.28
HPS4-212ENST00000481910 ACAD9Q9H845 621 aa13.29□□□□□ -0.28
HPS4-212ENST00000481910 PSTPIP2Q9H939 334 aa13.29□□□□□ -0.28
HPS4-212ENST00000481910 EFCC1Q9HA90 598 aa13.29□□□□□ -0.28
HPS4-212ENST00000481910 CWC22Q9HCG8 908 aaKnown RBP13.29□□□□□ -0.28
HPS4-212ENST00000481910 FBXO40Q9UH90 709 aa13.29□□□□□ -0.28
HPS4-212ENST00000481910 KCNJ14Q9UNX9 436 aa13.29□□□□□ -0.28
HPS4-212ENST00000481910 NFIBO00712 420 aa13.29□□□□□ -0.28
HPS4-212ENST00000481910 GUCY1B3Q02153 619 aa13.29□□□□□ -0.28
HPS4-212ENST00000481910 KRT40Q6A162 431 aa13.29□□□□□ -0.28
HPS4-212ENST00000481910 PPP1R18Q6NYC8 613 aa13.29□□□□□ -0.28
HPS4-212ENST00000481910 MCF2L2Q86YR7 1114 aa13.29□□□□□ -0.28
HPS4-212ENST00000481910 SHCBP1Q8NEM2 672 aa13.29□□□□□ -0.28
HPS4-212ENST00000481910 CLEC4DQ8WXI8 215 aa13.29□□□□□ -0.28
HPS4-212ENST00000481910 SHISA4Q96DD7 197 aa13.29□□□□□ -0.28
HPS4-212ENST00000481910 ZMYND12Q9H0C1 365 aa13.29□□□□□ -0.28
HPS4-212ENST00000481910 C6orf50Q9HD87 102 aa13.29□□□□□ -0.28
HPS4-212ENST00000481910 WBP1LQ9NX94 342 aa13.29□□□□□ -0.28
HPS4-212ENST00000481910 H3BQV1 296 aa13.28□□□□□ -0.28
HPS4-212ENST00000481910 OPLAHO14841 1288 aa13.28□□□□□ -0.28
HPS4-212ENST00000481910 CFBP00751 764 aa13.28□□□□□ -0.28
HPS4-212ENST00000481910 GNA11P29992 359 aa13.28□□□□□ -0.28
HPS4-212ENST00000481910 MAPK4P31152 587 aa13.28□□□□□ -0.28
HPS4-212ENST00000481910 MRPL12P52815 198 aaKnown RBP13.28□□□□□ -0.28
HPS4-212ENST00000481910 IFFO2Q5TF58 517 aa13.28□□□□□ -0.28
HPS4-212ENST00000481910 NSMFQ6X4W1 530 aa13.28□□□□□ -0.28
HPS4-212ENST00000481910 FAM177A1Q8N128 213 aaPredicted RBP13.28□□□□□ -0.28
HPS4-212ENST00000481910 GPATCH11Q8N954 259 aa13.28□□□□□ -0.28
HPS4-212ENST00000481910 FBXO18Q8NFZ0 1043 aa13.28□□□□□ -0.28
HPS4-212ENST00000481910 CUL5Q93034 780 aa13.28□□□□□ -0.28
HPS4-212ENST00000481910 PHF20Q9BVI0 1012 aa13.28□□□□□ -0.28
HPS4-212ENST00000481910 PRDM16Q9HAZ2 1276 aa13.28□□□□□ -0.28
HPS4-212ENST00000481910 ESYT2A0FGR8 921 aa13.27□□□□□ -0.28
HPS4-212ENST00000481910 SYT1P21579 422 aa13.27□□□□□ -0.28
HPS4-212ENST00000481910 CALML3P27482 149 aa13.27□□□□□ -0.28
HPS4-212ENST00000481910 PSEN1P49768 467 aa13.27□□□□□ -0.28
HPS4-212ENST00000481910 ADCY7P51828 1080 aa13.27□□□□□ -0.28
HPS4-212ENST00000481910 SP3Q02447 781 aa13.27□□□□□ -0.28
HPS4-212ENST00000481910 ANKRD35Q8N283 1001 aa13.27□□□□□ -0.28
HPS4-212ENST00000481910 PLCD3Q8N3E9 789 aa13.27□□□□□ -0.28
HPS4-212ENST00000481910 TBC1D5Q92609 795 aa13.27□□□□□ -0.28
HPS4-212ENST00000481910 RIC8AQ9NPQ8 531 aa13.27□□□□□ -0.28
HPS4-212ENST00000481910 IVNS1ABPQ9Y6Y0 642 aa13.27□□□□□ -0.28
HPS4-212ENST00000481910 GPR25O00155 361 aa13.27□□□□□ -0.29
HPS4-212ENST00000481910 KIF20AO95235 890 aa13.27□□□□□ -0.29
HPS4-212ENST00000481910 MMP1P03956 469 aa13.27□□□□□ -0.29
HPS4-212ENST00000481910 FCER1AP12319 257 aa13.27□□□□□ -0.29
HPS4-212ENST00000481910 HOXA13P31271 388 aaPredicted RBP13.27□□□□□ -0.29
HPS4-212ENST00000481910 SLC20A2Q08357 652 aa13.27□□□□□ -0.29
HPS4-212ENST00000481910 KCTD2Q14681 263 aa13.27□□□□□ -0.29
HPS4-212ENST00000481910 GALNT17Q6IS24 598 aa13.27□□□□□ -0.29
HPS4-212ENST00000481910 USP17L6PQ6QN14 398 aa13.27□□□□□ -0.29
HPS4-212ENST00000481910 RNF207Q6ZRF8 634 aa13.27□□□□□ -0.29
HPS4-212ENST00000481910 GLT8D2Q9H1C3 349 aa13.27□□□□□ -0.29
HPS4-212ENST00000481910 TSKSQ9UJT2 592 aa13.27□□□□□ -0.29
HPS4-212ENST00000481910 GCOM1H8Y6P7 765 aaPredicted RBP13.26□□□□□ -0.29
HPS4-212ENST00000481910 STRNO43815 780 aa13.26□□□□□ -0.29
HPS4-212ENST00000481910 POLR2MP0CAP2 368 aa13.26□□□□□ -0.29
HPS4-212ENST00000481910 LACTBP83111 547 aaPredicted RBP13.26□□□□□ -0.29
HPS4-212ENST00000481910 MKRN4PQ13434 485 aaPredicted RBP13.26□□□□□ -0.29
HPS4-212ENST00000481910 SAFBQ15424 915 aaKnown RBP eCLIP13.26□□□□□ -0.29
HPS4-212ENST00000481910 GPR142Q7Z601 462 aa13.26□□□□□ -0.29
HPS4-212ENST00000481910 HS6ST3Q8IZP7 471 aa13.26□□□□□ -0.29
HPS4-212ENST00000481910 BICD2Q8TD16 824 aa13.26□□□□□ -0.29
HPS4-212ENST00000481910 MMP19Q99542 508 aa13.26□□□□□ -0.29
HPS4-212ENST00000481910 BRMS1Q9HCU9 246 aa13.26□□□□□ -0.29
HPS4-212ENST00000481910 A1CFQ9NQ94 594 aaKnown RBP13.26□□□□□ -0.29
HPS4-212ENST00000481910 PCDHA4Q9UN74 947 aa13.26□□□□□ -0.29
HPS4-212ENST00000481910 VPS37CA5D8V6 355 aaPredicted RBP13.25□□□□□ -0.29
HPS4-212ENST00000481910 MEIS2O14770 477 aa13.25□□□□□ -0.29
HPS4-212ENST00000481910 STX6O43752 255 aa13.25□□□□□ -0.29
HPS4-212ENST00000481910 RPS6P62753 249 aaKnown RBP13.25□□□□□ -0.29
HPS4-212ENST00000481910 BAATQ14032 418 aaPredicted RBP13.25□□□□□ -0.29
HPS4-212ENST00000481910 KIF22Q14807 665 aa13.25□□□□□ -0.29
HPS4-212ENST00000481910 NBPF20Q3BBV1 942 aa13.25□□□□□ -0.29
HPS4-212ENST00000481910 PLEKHH3Q7Z736 793 aa13.25□□□□□ -0.29
HPS4-212ENST00000481910 BLIDQ8IZY5 108 aa13.25□□□□□ -0.29
HPS4-212ENST00000481910 SAMD3Q8N6K7 520 aa13.25□□□□□ -0.29
HPS4-212ENST00000481910 JMYQ8N9B5 988 aa13.25□□□□□ -0.29
HPS4-212ENST00000481910 MAP3K20Q9NYL2 800 aaKnown RBP13.25□□□□□ -0.29
HPS4-212ENST00000481910 CYP39A1Q9NYL5 469 aa13.25□□□□□ -0.29
HPS4-212ENST00000481910 BIN2Q9UBW5 565 aaPredicted RBP13.25□□□□□ -0.29
HPS4-212ENST00000481910 ZNFX1Q9P2E3 1918 aaKnown RBP13.25□□□□□ -0.29
HPS4-212ENST00000481910 PIK3CDO00329 1044 aa13.25□□□□□ -0.29
HPS4-212ENST00000481910 TNPO2O14787 897 aaKnown RBP13.25□□□□□ -0.29
HPS4-212ENST00000481910 ADAMTS3O15072 1205 aa13.25□□□□□ -0.29
HPS4-212ENST00000481910 KRT2P35908 639 aa13.25□□□□□ -0.29
HPS4-212ENST00000481910 PSMC4P43686 418 aa13.25□□□□□ -0.29
HPS4-212ENST00000481910 HSD17B4P51659 736 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms