RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 LRRFIP1Q32MZ4 808 aaKnown RBP3.66□□□□□ -1.82
USH2A-204ENST00000481786 HSF5Q4G112 596 aaPredicted RBP3.66□□□□□ -1.82
USH2A-204ENST00000481786 NLRC3Q7RTR2 1065 aa3.66□□□□□ -1.82
USH2A-204ENST00000481786 ZNF654Q8IZM8 581 aa3.66□□□□□ -1.82
USH2A-204ENST00000481786 C1QTNF3Q9BXJ4 246 aa3.66□□□□□ -1.82
USH2A-204ENST00000481786 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.66□□□□□ -1.82
USH2A-204ENST00000481786 ZNRF3Q9ULT6 936 aa3.66□□□□□ -1.82
USH2A-204ENST00000481786 MED1Q15648 1581 aaPredicted RBP3.66□□□□□ -1.82
USH2A-204ENST00000481786 KIF21BO75037 1637 aa3.66□□□□□ -1.82
USH2A-204ENST00000481786 PTPRGP23470 1445 aa3.65□□□□□ -1.83
USH2A-204ENST00000481786 TNFRSF10CO14798 259 aa3.65□□□□□ -1.83
USH2A-204ENST00000481786 ATF2P15336 505 aa3.65□□□□□ -1.83
USH2A-204ENST00000481786 PRKCAP17252 672 aa3.65□□□□□ -1.83
USH2A-204ENST00000481786 CCNFP41002 786 aa3.65□□□□□ -1.83
USH2A-204ENST00000481786 PAK2Q13177 524 aa3.65□□□□□ -1.83
USH2A-204ENST00000481786 BBS9Q3SYG4 887 aa3.65□□□□□ -1.83
USH2A-204ENST00000481786 NBPF12Q5TAG4 269 aaPredicted RBP3.65□□□□□ -1.83
USH2A-204ENST00000481786 C9orf131Q5VYM1 1079 aa3.65□□□□□ -1.83
USH2A-204ENST00000481786 OLFML2BQ68BL8 750 aa3.65□□□□□ -1.83
USH2A-204ENST00000481786 RNF111Q6ZNA4 994 aa3.65□□□□□ -1.83
USH2A-204ENST00000481786 NT5DC4Q86YG4 428 aa3.65□□□□□ -1.83
USH2A-204ENST00000481786 TMEM192Q8IY95 271 aa3.65□□□□□ -1.83
USH2A-204ENST00000481786 SH3RF3Q8TEJ3 882 aaPredicted RBP3.65□□□□□ -1.83
USH2A-204ENST00000481786 TCTN2Q96GX1 697 aa3.65□□□□□ -1.83
USH2A-204ENST00000481786 SLC9A7Q96T83 725 aa3.65□□□□□ -1.83
USH2A-204ENST00000481786 HDAC8Q9BY41 377 aa3.65□□□□□ -1.83
USH2A-204ENST00000481786 LNPKQ9C0E8 428 aa3.65□□□□□ -1.83
USH2A-204ENST00000481786 ING1Q9UK53 422 aaPredicted RBP3.65□□□□□ -1.83
USH2A-204ENST00000481786 TCFL5Q9UL49 500 aa3.65□□□□□ -1.83
USH2A-204ENST00000481786 MINPP1Q9UNW1 487 aa3.65□□□□□ -1.83
USH2A-204ENST00000481786 GPR55Q9Y2T6 319 aaPredicted RBP3.65□□□□□ -1.83
USH2A-204ENST00000481786 CCDC9Q9Y3X0 531 aaKnown RBP3.65□□□□□ -1.83
USH2A-204ENST00000481786 MAGI3Q5TCQ9 1506 aa3.65□□□□□ -1.83
USH2A-204ENST00000481786 SRCAPQ6ZRS2 3230 aa3.65□□□□□ -1.83
USH2A-204ENST00000481786 PTPRTO14522 1441 aa3.64□□□□□ -1.83
USH2A-204ENST00000481786 FADS2P1A8MWK0 482 aa3.64□□□□□ -1.83
USH2A-204ENST00000481786 MSL3P1P0C860 447 aa3.64□□□□□ -1.83
USH2A-204ENST00000481786 ACRP10323 421 aa3.64□□□□□ -1.83
USH2A-204ENST00000481786 IMPDH2P12268 514 aa3.64□□□□□ -1.83
USH2A-204ENST00000481786 RNF4P78317 190 aa3.64□□□□□ -1.83
USH2A-204ENST00000481786 FOXO4P98177 505 aa3.64□□□□□ -1.83
USH2A-204ENST00000481786 CAP1Q01518 475 aa3.64□□□□□ -1.83
USH2A-204ENST00000481786 RAD51AP2Q09MP3 1159 aa3.64□□□□□ -1.83
USH2A-204ENST00000481786 KLF10Q13118 480 aa3.64□□□□□ -1.83
USH2A-204ENST00000481786 CDSNQ15517 529 aa3.64□□□□□ -1.83
USH2A-204ENST00000481786 NBPF9Q3BBW0 867 aa3.64□□□□□ -1.83
USH2A-204ENST00000481786 PLEKHN1Q494U1 663 aaPredicted RBP3.64□□□□□ -1.83
USH2A-204ENST00000481786 INTS3Q68E01 1043 aaKnown RBP3.64□□□□□ -1.83
USH2A-204ENST00000481786 CRIP3Q6Q6R5 217 aa3.64□□□□□ -1.83
USH2A-204ENST00000481786 SAPCD2Q86UD0 394 aa3.64□□□□□ -1.83
USH2A-204ENST00000481786 TNFRSF12AQ9NP84 129 aa3.64□□□□□ -1.83
USH2A-204ENST00000481786 ST6GALNAC2Q9UJ37 374 aa3.64□□□□□ -1.83
USH2A-204ENST00000481786 PPT2Q9UMR5 302 aa3.64□□□□□ -1.83
USH2A-204ENST00000481786 UHRF1BP1LA0JNW5 1464 aa3.64□□□□□ -1.83
USH2A-204ENST00000481786 ARID4BQ4LE39 1312 aaPredicted RBP3.64□□□□□ -1.83
USH2A-204ENST00000481786 CUX1P39880 1505 aa3.64□□□□□ -1.83
USH2A-204ENST00000481786 LTBP4Q8N2S1 1624 aa3.63□□□□□ -1.83
USH2A-204ENST00000481786 MADDQ8WXG6 1647 aa3.63□□□□□ -1.83
USH2A-204ENST00000481786 CLEC3AO75596 197 aa3.63□□□□□ -1.83
USH2A-204ENST00000481786 MC3RP41968 323 aa3.63□□□□□ -1.83
USH2A-204ENST00000481786 CHMP4BP1P59074 171 aa3.63□□□□□ -1.83
USH2A-204ENST00000481786 HTRA3P83110 453 aa3.63□□□□□ -1.83
USH2A-204ENST00000481786 NMIQ13287 307 aaPredicted RBP3.63□□□□□ -1.83
USH2A-204ENST00000481786 SNW1Q13573 536 aaKnown RBP3.63□□□□□ -1.83
USH2A-204ENST00000481786 CBX2Q14781 532 aaPredicted RBP3.63□□□□□ -1.83
USH2A-204ENST00000481786 TMC3Q7Z5M5 1100 aa3.63□□□□□ -1.83
USH2A-204ENST00000481786 TAB3Q8N5C8 712 aaPredicted RBP3.63□□□□□ -1.83
USH2A-204ENST00000481786 RBBP8NLQ8NC74 664 aaPredicted RBP3.63□□□□□ -1.83
USH2A-204ENST00000481786 ENOX1Q8TC92 643 aaKnown RBP3.63□□□□□ -1.83
USH2A-204ENST00000481786 RASGRP4Q8TDF6 673 aa3.63□□□□□ -1.83
USH2A-204ENST00000481786 ZNF512BQ96KM6 892 aaPredicted RBP3.63□□□□□ -1.83
USH2A-204ENST00000481786 SLC6A18Q96N87 628 aa3.63□□□□□ -1.83
USH2A-204ENST00000481786 FERD3LQ96RJ6 166 aa3.63□□□□□ -1.83
USH2A-204ENST00000481786 PCED1AQ9H1Q7 454 aa3.63□□□□□ -1.83
USH2A-204ENST00000481786 GINM1Q9NU53 330 aa3.63□□□□□ -1.83
USH2A-204ENST00000481786 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.63□□□□□ -1.83
USH2A-204ENST00000481786 RUSC2Q8N2Y8 1516 aa3.63□□□□□ -1.83
USH2A-204ENST00000481786 ARAP3Q8WWN8 1544 aa3.63□□□□□ -1.83
USH2A-204ENST00000481786 CD109Q6YHK3 1445 aa3.62□□□□□ -1.83
USH2A-204ENST00000481786 BCORL1Q5H9F3 1711 aa3.62□□□□□ -1.83
USH2A-204ENST00000481786 ERICH3Q5RHP9 1530 aa3.62□□□□□ -1.83
USH2A-204ENST00000481786 SH3D21A4FU49 640 aa3.62□□□□□ -1.83
USH2A-204ENST00000481786 CYR61O00622 381 aa3.62□□□□□ -1.83
USH2A-204ENST00000481786 SYPP08247 313 aa3.62□□□□□ -1.83
USH2A-204ENST00000481786 HSPA1LP34931 641 aa3.62□□□□□ -1.83
USH2A-204ENST00000481786 GJA8P48165 433 aa3.62□□□□□ -1.83
USH2A-204ENST00000481786 SOX9P48436 509 aa3.62□□□□□ -1.83
USH2A-204ENST00000481786 CYP4F8P98187 520 aa3.62□□□□□ -1.83
USH2A-204ENST00000481786 COL9A2Q14055 689 aaPredicted RBP3.62□□□□□ -1.83
USH2A-204ENST00000481786 TBC1D10BQ4KMP7 808 aaPredicted RBP3.62□□□□□ -1.83
USH2A-204ENST00000481786 NLGN1Q8N2Q7 840 aa3.62□□□□□ -1.83
USH2A-204ENST00000481786 DAGLBQ8NCG7 672 aa3.62□□□□□ -1.83
USH2A-204ENST00000481786 NUP43Q8NFH3 380 aa3.62□□□□□ -1.83
USH2A-204ENST00000481786 SYTL5Q8TDW5 730 aaPredicted RBP3.62□□□□□ -1.83
USH2A-204ENST00000481786 GPRASP2Q96D09 838 aa3.62□□□□□ -1.83
USH2A-204ENST00000481786 SPATA32Q96LK8 384 aa3.62□□□□□ -1.83
USH2A-204ENST00000481786 TM9SF2Q99805 663 aa3.62□□□□□ -1.83
USH2A-204ENST00000481786 ZNF747Q9BV97 191 aa3.62□□□□□ -1.83
USH2A-204ENST00000481786 EFR3BQ9Y2G0 817 aa3.62□□□□□ -1.83
USH2A-204ENST00000481786 PMF1-BGLAPU3KQ54 211 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms