RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 SCLYQ96I15 445 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 NECAB3Q96P71 396 aaPredicted RBP4.14□□□□□ -1.75
SMC6-208ENST00000481708 AKAP2Q9Y2D5 859 aa4.14□□□□□ -1.75
SMC6-208ENST00000481708 CCDC7Q96M83 1385 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 PCSK2P16519 638 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 MCM4P33991 863 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 ICE2Q659A1 982 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 NECAB2Q7Z6G3 386 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 CLASRPQ8N2M8 674 aaKnown RBP4.13□□□□□ -1.75
SMC6-208ENST00000481708 ZSWIM2Q8NEG5 633 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 DYRK1BQ9Y463 629 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 DNAJC25-GNG10A0A024R161 153 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 XYLBO75191 536 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 MYL3P08590 195 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 ZNF280AP59817 542 aaPredicted RBP4.13□□□□□ -1.75
SMC6-208ENST00000481708 PWP1Q13610 501 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 GPATCH4Q5T3I0 446 aaKnown RBP4.13□□□□□ -1.75
SMC6-208ENST00000481708 SYDE2Q5VT97 1194 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 B3GNT9Q6UX72 402 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 CRIPAKQ8N1N5 446 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 SDR16C5Q8N3Y7 309 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 ANKRD42Q8N9B4 389 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 KIF2CQ99661 725 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 DHRS4Q9BTZ2 278 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 DDX21Q9NR30 783 aaKnown RBP eCLIP4.13□□□□□ -1.75
SMC6-208ENST00000481708 A0A1W2PQU0 124 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 MYBP10242 640 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 RGS19P49795 217 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 RENBPP51606 427 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 ERVK-21P61565 698 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 SCARF1Q14162 830 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 GET4Q7L5D6 327 aaPredicted RBP4.13□□□□□ -1.75
SMC6-208ENST00000481708 COL23A1Q86Y22 540 aaPredicted RBP4.13□□□□□ -1.75
SMC6-208ENST00000481708 GRIN3AQ8TCU5 1115 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 DDX1Q92499 740 aaKnown RBP4.13□□□□□ -1.75
SMC6-208ENST00000481708 FERD3LQ96RJ6 166 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 GAS2L1Q99501 681 aaPredicted RBP4.13□□□□□ -1.75
SMC6-208ENST00000481708 ZKSCAN3Q9BRR0 538 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 BRD7Q9NPI1 651 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 FAM13BQ9NYF5 915 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 USP25Q9UHP3 1055 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 PHTF1Q9UMS5 762 aa4.13□□□□□ -1.75
SMC6-208ENST00000481708 A0A0G2JMZ2 1700 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 PMM2O15305 246 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 F11P03951 625 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 BMP6P22004 513 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 SOX5P35711 763 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 ATP13A4Q4VNC1 1196 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 COBLL1Q53SF7 1204 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 CT47A1Q5JQC4 288 aaPredicted RBP4.12□□□□□ -1.75
SMC6-208ENST00000481708 ERP27Q96DN0 273 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 EIF2AK1Q9BQI3 630 aaKnown RBP4.12□□□□□ -1.75
SMC6-208ENST00000481708 LUC7L2Q9Y383 392 aaKnown RBP4.12□□□□□ -1.75
SMC6-208ENST00000481708 PCDHB14Q9Y5E9 798 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 MORC2Q9Y6X9 1032 aaPredicted RBP4.12□□□□□ -1.75
SMC6-208ENST00000481708 COL4A6Q14031 1691 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 hCG_1642624A0A1W2PR95 340 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 M0R2C6 588 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 EFSO43281 561 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 PRKD3O94806 890 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 EGFRP00533 1210 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 SPRED3Q2MJR0 410 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 GFOD2Q3B7J2 385 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 ANO1Q5XXA6 986 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 TOGARAM2Q6ZUX3 1019 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 SV2BQ7L1I2 683 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 NKAPQ8N5F7 415 aaKnown RBP4.12□□□□□ -1.75
SMC6-208ENST00000481708 JARID2Q92833 1246 aaPredicted RBP4.12□□□□□ -1.75
SMC6-208ENST00000481708 EHD4Q9H223 541 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 EHMT1Q9H9B1 1298 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 STRN4Q9NRL3 753 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 PRRT4C9JH25 899 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 ZRANB2O95218 330 aaKnown RBP eCLIP4.12□□□□□ -1.75
SMC6-208ENST00000481708 TSPY4P0CV99 314 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 TSPY10P0CW01 314 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 TYRP1P17643 537 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 PTMSP20962 102 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 LPOP22079 712 aaPredicted RBP4.12□□□□□ -1.75
SMC6-208ENST00000481708 ALDH5A1P51649 535 aaPredicted RBP4.12□□□□□ -1.75
SMC6-208ENST00000481708 GEMIN4P57678 1058 aaKnown RBP4.12□□□□□ -1.75
SMC6-208ENST00000481708 GBX1Q14549 363 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 SLC4A8Q2Y0W8 1093 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 ABHD17CQ6PCB6 329 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 PLCB1Q9NQ66 1216 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 SEC31BQ9NQW1 1179 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 TNPO3Q9Y5L0 923 aaKnown RBP4.12□□□□□ -1.75
SMC6-208ENST00000481708 GJA3Q9Y6H8 435 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 ATP10DQ9P241 1426 aa4.12□□□□□ -1.75
SMC6-208ENST00000481708 DDX60LQ5H9U9 1706 aaKnown RBP4.11□□□□□ -1.75
SMC6-208ENST00000481708 MYH3P11055 1940 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 CACNA1FO60840 1977 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 FAM86C2PA6NEL3 165 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 NFKBIEO00221 500 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 AXIN1O15169 862 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 PCDHGA12O60330 932 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 ZBED6P86452 979 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 SFSWAPQ12872 951 aaKnown RBP4.11□□□□□ -1.75
SMC6-208ENST00000481708 PCBP2Q15366 365 aaKnown RBP eCLIP4.11□□□□□ -1.75
SMC6-208ENST00000481708 SAMD5Q5TGI4 173 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 DNAJC5GQ8N7S2 189 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms