RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 CATIPQ7Z7H3 387 aa13.28□□□□□ -0.28
RAPGEF1-207ENST00000481260 FBXO11Q86XK2 927 aa13.28□□□□□ -0.28
RAPGEF1-207ENST00000481260 SRBD1Q8N5C6 995 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-207ENST00000481260 SYTL5Q8TDW5 730 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF1-207ENST00000481260 KCNB2Q92953 911 aa13.28□□□□□ -0.28
RAPGEF1-207ENST00000481260 RIOX1Q9H6W3 641 aa13.28□□□□□ -0.28
RAPGEF1-207ENST00000481260 NRBP1Q9UHY1 535 aa13.28□□□□□ -0.28
RAPGEF1-207ENST00000481260 SNX14Q9Y5W7 946 aa13.28□□□□□ -0.28
RAPGEF1-207ENST00000481260 ERICH2A1L162 156 aa13.27□□□□□ -0.29
RAPGEF1-207ENST00000481260 HOXA13P31271 388 aaPredicted RBP13.27□□□□□ -0.29
RAPGEF1-207ENST00000481260 CCSAPQ6IQ19 270 aaPredicted RBP13.27□□□□□ -0.29
RAPGEF1-207ENST00000481260 NFXL1Q6ZNB6 911 aa13.27□□□□□ -0.29
RAPGEF1-207ENST00000481260 KLHDC9Q8NEP7 349 aa13.27□□□□□ -0.29
RAPGEF1-207ENST00000481260 MORC4Q8TE76 937 aa13.27□□□□□ -0.29
RAPGEF1-207ENST00000481260 ZFP91Q96JP5 570 aaPredicted RBP13.27□□□□□ -0.29
RAPGEF1-207ENST00000481260 NEK1Q96PY6 1258 aa13.27□□□□□ -0.29
RAPGEF1-207ENST00000481260 ABHD16BQ9H3Z7 469 aa13.27□□□□□ -0.29
RAPGEF1-207ENST00000481260 FAM184BQ9ULE4 1060 aa13.27□□□□□ -0.29
RAPGEF1-207ENST00000481260 ZBTB5O15062 677 aa13.26□□□□□ -0.29
RAPGEF1-207ENST00000481260 ABCB11O95342 1321 aa13.26□□□□□ -0.29
RAPGEF1-207ENST00000481260 ARIH2O95376 493 aa13.26□□□□□ -0.29
RAPGEF1-207ENST00000481260 HSPA4P34932 840 aa13.26□□□□□ -0.29
RAPGEF1-207ENST00000481260 RTP1P59025 263 aa13.26□□□□□ -0.29
RAPGEF1-207ENST00000481260 SART3Q15020 963 aaKnown RBP13.26□□□□□ -0.29
RAPGEF1-207ENST00000481260 TSGA10IPQ3SY00 556 aa13.26□□□□□ -0.29
RAPGEF1-207ENST00000481260 TRIM60Q495X7 471 aa13.26□□□□□ -0.29
RAPGEF1-207ENST00000481260 CCDC82Q8N4S0 544 aa13.26□□□□□ -0.29
RAPGEF1-207ENST00000481260 ARRDC4Q8NCT1 418 aa13.26□□□□□ -0.29
RAPGEF1-207ENST00000481260 IL31RAQ8NI17 732 aa13.26□□□□□ -0.29
RAPGEF1-207ENST00000481260 PPP1R13LQ8WUF5 828 aa13.26□□□□□ -0.29
RAPGEF1-207ENST00000481260 COPS5Q92905 334 aa13.26□□□□□ -0.29
RAPGEF1-207ENST00000481260 JAKMIP1Q96N16 626 aaKnown RBP13.26□□□□□ -0.29
RAPGEF1-207ENST00000481260 PRO3102Q9H379 93 aa13.26□□□□□ -0.29
RAPGEF1-207ENST00000481260 RBM27Q9P2N5 1060 aaKnown RBP13.26□□□□□ -0.29
RAPGEF1-207ENST00000481260 PHF24Q9UPV7 400 aa13.26□□□□□ -0.29
RAPGEF1-207ENST00000481260 GNEQ9Y223 722 aaKnown RBP13.26□□□□□ -0.29
RAPGEF1-207ENST00000481260 A0A1W2PQ45 241 aaPredicted RBP13.25□□□□□ -0.29
RAPGEF1-207ENST00000481260 A0A1W2PQY0 241 aa13.25□□□□□ -0.29
RAPGEF1-207ENST00000481260 ASB14A6NK59 587 aa13.25□□□□□ -0.29
RAPGEF1-207ENST00000481260 KBTBD13C9JR72 458 aa13.25□□□□□ -0.29
RAPGEF1-207ENST00000481260 DUSP11O75319 330 aaKnown RBP13.25□□□□□ -0.29
RAPGEF1-207ENST00000481260 DDAH1O94760 285 aa13.25□□□□□ -0.29
RAPGEF1-207ENST00000481260 CFBP00751 764 aa13.25□□□□□ -0.29
RAPGEF1-207ENST00000481260 EDNRBP24530 442 aa13.25□□□□□ -0.29
RAPGEF1-207ENST00000481260 TNFAIP2Q03169 654 aa13.25□□□□□ -0.29
RAPGEF1-207ENST00000481260 KCNA10Q16322 511 aa13.25□□□□□ -0.29
RAPGEF1-207ENST00000481260 SLC39A5Q6ZMH5 540 aa13.25□□□□□ -0.29
RAPGEF1-207ENST00000481260 DHX32Q7L7V1 743 aaKnown RBP13.25□□□□□ -0.29
RAPGEF1-207ENST00000481260 SH3RF1Q7Z6J0 888 aa13.25□□□□□ -0.29
RAPGEF1-207ENST00000481260 MICU3Q86XE3 530 aa13.25□□□□□ -0.29
RAPGEF1-207ENST00000481260 TMEM87BQ96K49 555 aa13.25□□□□□ -0.29
RAPGEF1-207ENST00000481260 AMNQ9BXJ7 453 aa13.25□□□□□ -0.29
RAPGEF1-207ENST00000481260 UPF3AQ9H1J1 476 aaKnown RBP13.25□□□□□ -0.29
RAPGEF1-207ENST00000481260 FAM217BQ9NTX9 383 aaPredicted RBP13.25□□□□□ -0.29
RAPGEF1-207ENST00000481260 ATP11BQ9Y2G3 1177 aa13.25□□□□□ -0.29
RAPGEF1-207ENST00000481260 PCDHA1Q9Y5I3 950 aa13.25□□□□□ -0.29
RAPGEF1-207ENST00000481260 CCDC69A6NI79 296 aa13.24□□□□□ -0.29
RAPGEF1-207ENST00000481260 DYNC1LI2O43237 492 aaPredicted RBP13.24□□□□□ -0.29
RAPGEF1-207ENST00000481260 C6orf222P0C671 652 aaPredicted RBP13.24□□□□□ -0.29
RAPGEF1-207ENST00000481260 EIF2AK2P19525 551 aaKnown RBP13.24□□□□□ -0.29
RAPGEF1-207ENST00000481260 LIFRP42702 1097 aa13.24□□□□□ -0.29
RAPGEF1-207ENST00000481260 HSD17B4P51659 736 aa13.24□□□□□ -0.29
RAPGEF1-207ENST00000481260 ACLYP53396 1101 aa13.24□□□□□ -0.29
RAPGEF1-207ENST00000481260 GJA9P57773 515 aa13.24□□□□□ -0.29
RAPGEF1-207ENST00000481260 RNF20Q5VTR2 975 aa13.24□□□□□ -0.29
RAPGEF1-207ENST00000481260 NOL8Q76FK4 1167 aaKnown RBP13.24□□□□□ -0.29
RAPGEF1-207ENST00000481260 LARP6Q9BRS8 491 aaKnown RBP13.24□□□□□ -0.29
RAPGEF1-207ENST00000481260 USP26Q9BXU7 913 aa13.24□□□□□ -0.29
RAPGEF1-207ENST00000481260 MRPL11Q9Y3B7 192 aaKnown RBP13.24□□□□□ -0.29
RAPGEF1-207ENST00000481260 PNMA6FA0A0J9YX94 578 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 DTNBO60941 627 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 PPFIA3O75145 1194 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 CAPN2P17655 700 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 ITGB8P26012 769 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 CDC27P30260 824 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 MAGEA10P43363 369 aaPredicted RBP13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 APOBRQ0VD83 1088 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 FUT2Q10981 343 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 SNX17Q15036 470 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 HABP4Q5JVS0 413 aaKnown RBP13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 ERICH6BQ5W0A0 696 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 APOA5Q6Q788 366 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 Q6ZUG5 572 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 TMTC3Q6ZXV5 915 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 RNF180Q86T96 592 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 TLK2Q86UE8 772 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 SGMS1Q86VZ5 419 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 FANCBQ8NB91 859 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 RGS22Q8NE09 1264 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 GPKOWQ92917 476 aaPredicted RBP eCLIP13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 VTA1Q9NP79 307 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 NR2E3Q9Y5X4 410 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 SLC12A7Q9Y666 1083 aa13.23□□□□□ -0.29
RAPGEF1-207ENST00000481260 GRIN2DO15399 1336 aa13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 KLF18A0A0U1RQI7 1052 aa13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 RBM47A0AV96 593 aaKnown RBP13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 TRIM43BA6NCK2 446 aa13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 ADAMTS3O15072 1205 aa13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 SORBS3O60504 671 aa13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 SEC24BO95487 1268 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms