RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 PNMA6FA0A0J9YX94 578 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 HNRNPDLO14979 420 aaKnown RBP10.39□□□□□ -0.75
GARNL3-216ENST00000481242 ADAM9Q13443 819 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 SETDB1Q15047 1291 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 ERCC6LQ2NKX8 1250 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 SPATA1Q5VX52 437 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 AP1ARQ63HQ0 302 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 RRAGAQ7L523 313 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 RNF169Q8NCN4 708 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 TRIM58Q8NG06 486 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 DHTKD1Q96HY7 919 aaPredicted RBP10.39□□□□□ -0.75
GARNL3-216ENST00000481242 RSPH14Q9UHP6 348 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 AMFRQ9UKV5 643 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 RFX7Q2KHR2 1363 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 PFDN6O15212 129 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 CYP19A1P11511 503 aaPredicted RBP10.39□□□□□ -0.75
GARNL3-216ENST00000481242 IFIH1Q9BYX4 1025 aaKnown RBP10.39□□□□□ -0.75
GARNL3-216ENST00000481242 BLZF1Q9H2G9 400 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 SH3GLB2Q9NR46 395 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 ASIC3Q9UHC3 531 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 KCNJ18B7U540 433 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 GMNNO75496 209 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 RPN1P04843 607 aaKnown RBP10.39□□□□□ -0.75
GARNL3-216ENST00000481242 PDE6CP51160 858 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 DYNLL1P63167 89 aaKnown RBP10.39□□□□□ -0.75
GARNL3-216ENST00000481242 KCNJ12Q14500 433 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 ARHGAP44Q17R89 818 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 POMGNT1Q8WZA1 660 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 TRIM11Q96F44 468 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 ST7Q9NRC1 585 aa10.39□□□□□ -0.75
GARNL3-216ENST00000481242 C21orf2O43822 256 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 CDK8P49336 464 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 LACTBP83111 547 aaPredicted RBP10.38□□□□□ -0.75
GARNL3-216ENST00000481242 MORC3Q14149 939 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 CDC37Q16543 378 aaPredicted RBP10.38□□□□□ -0.75
GARNL3-216ENST00000481242 SP8Q8IXZ3 490 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 SPICE1Q8N0Z3 855 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 LCORLQ8N3X6 602 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 FAM167AQ96KS9 214 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 ACCSQ96QU6 501 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 RAB17Q9H0T7 212 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 CD209Q9NNX6 404 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 FAM207AQ9NSI2 230 aaPredicted RBP10.38□□□□□ -0.75
GARNL3-216ENST00000481242 RIPOR2Q9Y4F9 1068 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 RNF8O76064 485 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 PTK2Q05397 1052 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 MTMR3Q13615 1198 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 RDH13Q8NBN7 331 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 MIPOL1Q8TD10 442 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 SELENOSQ9BQE4 189 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 MED10Q9BTT4 135 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.38□□□□□ -0.75
GARNL3-216ENST00000481242 ABT1Q9ULW3 272 aaKnown RBP10.38□□□□□ -0.75
GARNL3-216ENST00000481242 KIAA1024Q9UPX6 916 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 MED14O60244 1454 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 SH2B2O14492 632 aaPredicted RBP10.38□□□□□ -0.75
GARNL3-216ENST00000481242 CEP104O60308 925 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 PSAPP07602 524 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 ZSCAN20P17040 1043 aaPredicted RBP10.38□□□□□ -0.75
GARNL3-216ENST00000481242 BIRC2Q13490 618 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 ARL6IP4Q66PJ3 421 aaKnown RBP10.38□□□□□ -0.75
GARNL3-216ENST00000481242 METTL23Q86XA0 190 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 MAP7D3Q8IWC1 876 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 SMC1BQ8NDV3 1235 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 NT5C1BQ96P26 610 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 ISCA1Q9BUE6 129 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 SAMD15Q9P1V8 674 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 ANAPC4Q9UJX5 808 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 ALKQ9UM73 1620 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 MINPP1Q9UNW1 487 aa10.38□□□□□ -0.75
GARNL3-216ENST00000481242 GADD45BO75293 160 aaPredicted RBP10.37□□□□□ -0.75
GARNL3-216ENST00000481242 SASH1O94885 1247 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 CRKP46108 304 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 PAK2Q13177 524 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 PSMD2Q13200 908 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 ORC2Q13416 577 aaPredicted RBP10.37□□□□□ -0.75
GARNL3-216ENST00000481242 CUL4AQ13619 759 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 CCDC6Q16204 474 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 CPLX4Q7Z7G2 160 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 C10orf67Q8IYJ2 551 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 ZNF526Q8TF50 670 aaPredicted RBP10.37□□□□□ -0.75
GARNL3-216ENST00000481242 STAMQ92783 540 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 MMS19Q96T76 1030 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 SPON1Q9HCB6 807 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.37□□□□□ -0.75
GARNL3-216ENST00000481242 MKRN1Q9UHC7 482 aaKnown RBP10.37□□□□□ -0.75
GARNL3-216ENST00000481242 SEPT9Q9UHD8 586 aaPredicted RBP10.37□□□□□ -0.75
GARNL3-216ENST00000481242 RNF17Q9BXT8 1623 aaKnown RBP10.37□□□□□ -0.75
GARNL3-216ENST00000481242 WDR19Q8NEZ3 1342 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 ZNF233A6NK53 670 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 GDF11O95390 407 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 H2AFZP0C0S5 128 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 EEF1GP26641 437 aaKnown RBP10.37□□□□□ -0.75
GARNL3-216ENST00000481242 SCRN1Q12765 414 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 H2AFVQ71UI9 128 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 TRIM50Q86XT4 487 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 POTEDQ86YR6 584 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 GRK7Q8WTQ7 553 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 OSBP2Q969R2 916 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 ANKRD36BP1Q96IX9 119 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms