RNA–Protein interactions for RNA: ENST00000481077.6

CNKSR1-206, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 865 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-206ENST00000481077 UNC93B1Q9H1C4 597 aa18.01■□□□□ 0.47
CNKSR1-206ENST00000481077 SLKQ9H2G2 1235 aaPredicted RBP18.01■□□□□ 0.47
CNKSR1-206ENST00000481077 SYNGAP1Q96PV0 1343 aa18■□□□□ 0.47
CNKSR1-206ENST00000481077 RBBP6Q7Z6E9 1792 aaKnown RBP18■□□□□ 0.47
CNKSR1-206ENST00000481077 SOWAHBA6NEL2 793 aa18■□□□□ 0.47
CNKSR1-206ENST00000481077 CFBP00751 764 aa18■□□□□ 0.47
CNKSR1-206ENST00000481077 AKAP17AQ02040 695 aaKnown RBP18■□□□□ 0.47
CNKSR1-206ENST00000481077 RABEP1Q15276 862 aa18■□□□□ 0.47
CNKSR1-206ENST00000481077 CPLX2Q6PUV4 134 aaKnown RBP18■□□□□ 0.47
CNKSR1-206ENST00000481077 MAMDC4Q6UXC1 1216 aa18■□□□□ 0.47
CNKSR1-206ENST00000481077 FGD4Q96M96 766 aa18■□□□□ 0.47
CNKSR1-206ENST00000481077 RBM27Q9P2N5 1060 aaKnown RBP18■□□□□ 0.47
CNKSR1-206ENST00000481077 BRCA2P51587 3418 aa17.99■□□□□ 0.47
CNKSR1-206ENST00000481077 ASB14A6NK59 587 aa17.99■□□□□ 0.47
CNKSR1-206ENST00000481077 OPLAHO14841 1288 aa17.99■□□□□ 0.47
CNKSR1-206ENST00000481077 PFKFB2O60825 505 aa17.99■□□□□ 0.47
CNKSR1-206ENST00000481077 IFNAR1P17181 557 aa17.99■□□□□ 0.47
CNKSR1-206ENST00000481077 NTRK3Q16288 839 aa17.99■□□□□ 0.47
CNKSR1-206ENST00000481077 SAMD3Q8N6K7 520 aa17.99■□□□□ 0.47
CNKSR1-206ENST00000481077 TBC1D5Q92609 795 aa17.99■□□□□ 0.47
CNKSR1-206ENST00000481077 PURBQ96QR8 312 aaKnown RBP17.99■□□□□ 0.47
CNKSR1-206ENST00000481077 MPHOSPH6Q99547 160 aaKnown RBP17.99■□□□□ 0.47
CNKSR1-206ENST00000481077 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.99■□□□□ 0.47
CNKSR1-206ENST00000481077 MAP3K20Q9NYL2 800 aaKnown RBP17.99■□□□□ 0.47
CNKSR1-206ENST00000481077 CNPY2Q9Y2B0 182 aa17.99■□□□□ 0.47
CNKSR1-206ENST00000481077 GCOM1H8Y6P7 765 aaPredicted RBP17.98■□□□□ 0.47
CNKSR1-206ENST00000481077 PRPF3O43395 683 aaKnown RBP17.98■□□□□ 0.47
CNKSR1-206ENST00000481077 POLR2MP0CAP2 368 aa17.98■□□□□ 0.47
CNKSR1-206ENST00000481077 CNGA1P29973 690 aa17.98■□□□□ 0.47
CNKSR1-206ENST00000481077 HSD17B4P51659 736 aa17.98■□□□□ 0.47
CNKSR1-206ENST00000481077 ARMCX2Q7L311 632 aa17.98■□□□□ 0.47
CNKSR1-206ENST00000481077 TRIM22Q8IYM9 498 aa17.98■□□□□ 0.47
CNKSR1-206ENST00000481077 IL27Q8NEV9 243 aa17.98■□□□□ 0.47
CNKSR1-206ENST00000481077 DNERQ8NFT8 737 aa17.98■□□□□ 0.47
CNKSR1-206ENST00000481077 SYTL5Q8TDW5 730 aaPredicted RBP17.98■□□□□ 0.47
CNKSR1-206ENST00000481077 GPKOWQ92917 476 aaPredicted RBP eCLIP17.98■□□□□ 0.47
CNKSR1-206ENST00000481077 PHKBQ93100 1093 aa17.98■□□□□ 0.47
CNKSR1-206ENST00000481077 SLC26A6Q9BXS9 759 aa17.98■□□□□ 0.47
CNKSR1-206ENST00000481077 RNF26Q9BY78 433 aaPredicted RBP17.98■□□□□ 0.47
CNKSR1-206ENST00000481077 PAK6Q9NQU5 681 aaPredicted RBP17.98■□□□□ 0.47
CNKSR1-206ENST00000481077 NRBP1Q9UHY1 535 aa17.98■□□□□ 0.47
CNKSR1-206ENST00000481077 LOC102724159A0A0B4J2E5 919 aa17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 B4DLN1 442 aa17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 hCG_1984214I3L0E3 225 aa17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 CDKL5O76039 1030 aa17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 GJB1P08034 283 aa17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 CYBAP13498 195 aa17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 CCND3P30281 292 aaPredicted RBP17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 ALDH5A1P51649 535 aaPredicted RBP17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 MRPL12P52815 198 aaKnown RBP17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 GHRHRQ02643 423 aa17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 SCRN1Q12765 414 aa17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 PWP2Q15269 919 aaKnown RBP17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 ME3Q16798 604 aa17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 PFKFB3Q16875 520 aaPredicted RBP17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 PRAMEF19Q5SWL8 479 aa17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 WWC2Q6AWC2 1192 aa17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 ZNF713Q8N859 430 aaPredicted RBP17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 CUL5Q93034 780 aa17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 LIMCH1Q9UPQ0 1083 aa17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 ASTN1O14525 1302 aa17.97■□□□□ 0.47
CNKSR1-206ENST00000481077 ST18O60284 1047 aa17.96■□□□□ 0.47
CNKSR1-206ENST00000481077 PPFIA3O75145 1194 aa17.96■□□□□ 0.47
CNKSR1-206ENST00000481077 CAPN15O75808 1086 aa17.96■□□□□ 0.47
CNKSR1-206ENST00000481077 SNAI1O95863 264 aaPredicted RBP17.96■□□□□ 0.47
CNKSR1-206ENST00000481077 SCG2P13521 617 aa17.96■□□□□ 0.47
CNKSR1-206ENST00000481077 HOXA13P31271 388 aaPredicted RBP17.96■□□□□ 0.47
CNKSR1-206ENST00000481077 NAPAP54920 295 aa17.96■□□□□ 0.47
CNKSR1-206ENST00000481077 SOX10P56693 466 aa17.96■□□□□ 0.47
CNKSR1-206ENST00000481077 SSRP1Q08945 709 aaKnown RBP17.96■□□□□ 0.47
CNKSR1-206ENST00000481077 PPP1R18Q6NYC8 613 aa17.96■□□□□ 0.47
CNKSR1-206ENST00000481077 TRPV1Q8NER1 839 aa17.96■□□□□ 0.47
CNKSR1-206ENST00000481077 NSUN6Q8TEA1 469 aaKnown RBP17.96■□□□□ 0.47
CNKSR1-206ENST00000481077 DEFB118Q96PH6 123 aa17.96■□□□□ 0.47
CNKSR1-206ENST00000481077 RMDN3Q96TC7 470 aa17.96■□□□□ 0.47
CNKSR1-206ENST00000481077 ABHD16BQ9H3Z7 469 aa17.96■□□□□ 0.47
CNKSR1-206ENST00000481077 PSTPIP2Q9H939 334 aa17.96■□□□□ 0.47
CNKSR1-206ENST00000481077 BARHL2Q9NY43 387 aa17.96■□□□□ 0.47
CNKSR1-206ENST00000481077 COL20A1Q9P218 1284 aa17.96■□□□□ 0.47
CNKSR1-206ENST00000481077 LCTP09848 1927 aa17.96■□□□□ 0.47
CNKSR1-206ENST00000481077 POTEFA5A3E0 1075 aa17.95■□□□□ 0.46
CNKSR1-206ENST00000481077 STXBP3O00186 592 aa17.95■□□□□ 0.46
CNKSR1-206ENST00000481077 PDE4DQ08499 809 aa17.95■□□□□ 0.46
CNKSR1-206ENST00000481077 ARHGEF16Q5VV41 709 aa17.95■□□□□ 0.46
CNKSR1-206ENST00000481077 NECAB1Q8N987 351 aa17.95■□□□□ 0.46
CNKSR1-206ENST00000481077 GTF3C6Q969F1 213 aa17.95■□□□□ 0.46
CNKSR1-206ENST00000481077 TAAR1Q96RJ0 339 aa17.95■□□□□ 0.46
CNKSR1-206ENST00000481077 PIK3CDO00329 1044 aa17.94■□□□□ 0.46
CNKSR1-206ENST00000481077 SEPT4O43236 478 aa17.94■□□□□ 0.46
CNKSR1-206ENST00000481077 MSCO60682 206 aa17.94■□□□□ 0.46
CNKSR1-206ENST00000481077 LARGE1O95461 756 aa17.94■□□□□ 0.46
CNKSR1-206ENST00000481077 GJA8P48165 433 aa17.94■□□□□ 0.46
CNKSR1-206ENST00000481077 ACVR2BQ13705 512 aa17.94■□□□□ 0.46
CNKSR1-206ENST00000481077 PKN1Q16512 942 aa17.94■□□□□ 0.46
CNKSR1-206ENST00000481077 FCHSD1Q86WN1 690 aa17.94■□□□□ 0.46
CNKSR1-206ENST00000481077 SMARCC2Q8TAQ2 1214 aa17.94■□□□□ 0.46
CNKSR1-206ENST00000481077 MORC4Q8TE76 937 aa17.94■□□□□ 0.46
CNKSR1-206ENST00000481077 U2AF1L4Q8WU68 220 aaKnown RBP17.94■□□□□ 0.46
CNKSR1-206ENST00000481077 CCDC12Q8WUD4 166 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms