RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 HMX1Q9NP08 348 aaPredicted RBP23.53■■□□□ 1.36
CTSA-206ENST00000480961 BAZ2BQ9UIF8 2168 aaKnown RBP23.52■■□□□ 1.36
CTSA-206ENST00000480961 SMCHD1A6NHR9 2005 aa23.52■■□□□ 1.36
CTSA-206ENST00000480961 CNGA1P29973 690 aa23.52■■□□□ 1.36
CTSA-206ENST00000480961 HOXA13P31271 388 aaPredicted RBP23.52■■□□□ 1.36
CTSA-206ENST00000480961 PPP2R5BQ15173 497 aa23.52■■□□□ 1.36
CTSA-206ENST00000480961 ANKRD1Q15327 319 aa23.52■■□□□ 1.36
CTSA-206ENST00000480961 MCF2L2Q86YR7 1114 aa23.52■■□□□ 1.36
CTSA-206ENST00000480961 RGS22Q8NE09 1264 aa23.52■■□□□ 1.36
CTSA-206ENST00000480961 SYTL5Q8TDW5 730 aaPredicted RBP23.52■■□□□ 1.36
CTSA-206ENST00000480961 DEFB118Q96PH6 123 aa23.52■■□□□ 1.36
CTSA-206ENST00000480961 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.52■■□□□ 1.36
CTSA-206ENST00000480961 COL20A1Q9P218 1284 aa23.52■■□□□ 1.36
CTSA-206ENST00000480961 RPTORQ8N122 1335 aa23.52■■□□□ 1.36
CTSA-206ENST00000480961 SNAI1O95863 264 aaPredicted RBP23.51■■□□□ 1.35
CTSA-206ENST00000480961 NECAB1Q8N987 351 aa23.51■■□□□ 1.35
CTSA-206ENST00000480961 ZNF236Q9UL36 1845 aa23.51■■□□□ 1.35
CTSA-206ENST00000480961 NID2Q14112 1375 aa23.51■■□□□ 1.35
CTSA-206ENST00000480961 LARGE1O95461 756 aa23.5■■□□□ 1.35
CTSA-206ENST00000480961 EN2P19622 333 aaPredicted RBP23.5■■□□□ 1.35
CTSA-206ENST00000480961 TRAF1Q13077 416 aa23.5■■□□□ 1.35
CTSA-206ENST00000480961 NTRK3Q16288 839 aa23.5■■□□□ 1.35
CTSA-206ENST00000480961 WWC2Q6AWC2 1192 aa23.5■■□□□ 1.35
CTSA-206ENST00000480961 MAMDC4Q6UXC1 1216 aa23.5■■□□□ 1.35
CTSA-206ENST00000480961 ARMCX2Q7L311 632 aa23.5■■□□□ 1.35
CTSA-206ENST00000480961 ZNF467Q7Z7K2 595 aaPredicted RBP23.5■■□□□ 1.35
CTSA-206ENST00000480961 TBC1D32Q96NH3 1257 aa23.5■■□□□ 1.35
CTSA-206ENST00000480961 TAAR1Q96RJ0 339 aa23.5■■□□□ 1.35
CTSA-206ENST00000480961 SLC26A6Q9BXS9 759 aa23.5■■□□□ 1.35
CTSA-206ENST00000480961 SLKQ9H2G2 1235 aaPredicted RBP23.5■■□□□ 1.35
CTSA-206ENST00000480961 CYBAP13498 195 aa23.49■■□□□ 1.35
CTSA-206ENST00000480961 SCRN1Q12765 414 aa23.49■■□□□ 1.35
CTSA-206ENST00000480961 ANO1Q5XXA6 986 aa23.49■■□□□ 1.35
CTSA-206ENST00000480961 PAK6Q9NQU5 681 aaPredicted RBP23.49■■□□□ 1.35
CTSA-206ENST00000480961 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.49■■□□□ 1.35
CTSA-206ENST00000480961 GCOM1H8Y6P7 765 aaPredicted RBP23.48■■□□□ 1.35
CTSA-206ENST00000480961 CPLX1O14810 134 aa23.48■■□□□ 1.35
CTSA-206ENST00000480961 PFKFB2O60825 505 aa23.48■■□□□ 1.35
CTSA-206ENST00000480961 GJB1P08034 283 aa23.48■■□□□ 1.35
CTSA-206ENST00000480961 POLR2MP0CAP2 368 aa23.48■■□□□ 1.35
CTSA-206ENST00000480961 ALDH5A1P51649 535 aaPredicted RBP23.48■■□□□ 1.35
CTSA-206ENST00000480961 HSD17B4P51659 736 aa23.48■■□□□ 1.35
CTSA-206ENST00000480961 ME3Q16798 604 aa23.48■■□□□ 1.35
CTSA-206ENST00000480961 EEPD1Q7L9B9 569 aa23.48■■□□□ 1.35
CTSA-206ENST00000480961 FCHSD1Q86WN1 690 aa23.48■■□□□ 1.35
CTSA-206ENST00000480961 ADD3Q9UEY8 706 aaKnown RBP23.48■■□□□ 1.35
CTSA-206ENST00000480961 ZHX1Q9UKY1 873 aaPredicted RBP23.48■■□□□ 1.35
CTSA-206ENST00000480961 CNPY2Q9Y2B0 182 aa23.48■■□□□ 1.35
CTSA-206ENST00000480961 SYNGAP1Q96PV0 1343 aa23.48■■□□□ 1.35
CTSA-206ENST00000480961 ASB14A6NK59 587 aa23.47■■□□□ 1.35
CTSA-206ENST00000480961 ZNF865P0CJ78 1059 aaPredicted RBP23.47■■□□□ 1.35
CTSA-206ENST00000480961 IFNAR1P17181 557 aa23.47■■□□□ 1.35
CTSA-206ENST00000480961 TYW1BQ6NUM6 668 aa23.47■■□□□ 1.35
CTSA-206ENST00000480961 MSL3Q8N5Y2 521 aaKnown RBP23.47■■□□□ 1.35
CTSA-206ENST00000480961 U2AF1L4Q8WU68 220 aaKnown RBP23.47■■□□□ 1.35
CTSA-206ENST00000480961 PRPF3O43395 683 aaKnown RBP23.46■■□□□ 1.35
CTSA-206ENST00000480961 TFRCP02786 760 aaKnown RBP23.46■■□□□ 1.35
CTSA-206ENST00000480961 NAPAP54920 295 aa23.46■■□□□ 1.35
CTSA-206ENST00000480961 AKAP17AQ02040 695 aaKnown RBP23.46■■□□□ 1.35
CTSA-206ENST00000480961 ACVR2BQ13705 512 aa23.46■■□□□ 1.35
CTSA-206ENST00000480961 RABEP1Q15276 862 aa23.46■■□□□ 1.35
CTSA-206ENST00000480961 PKN1Q16512 942 aa23.46■■□□□ 1.35
CTSA-206ENST00000480961 USP17L6PQ6QN14 398 aa23.46■■□□□ 1.35
CTSA-206ENST00000480961 RMDN3Q96TC7 470 aa23.46■■□□□ 1.35
CTSA-206ENST00000480961 STXBP3O00186 592 aa23.45■■□□□ 1.34
CTSA-206ENST00000480961 SGPL1O95470 568 aa23.45■■□□□ 1.34
CTSA-206ENST00000480961 EIF2AK2P19525 551 aaKnown RBP23.45■■□□□ 1.34
CTSA-206ENST00000480961 SSRP1Q08945 709 aaKnown RBP23.45■■□□□ 1.34
CTSA-206ENST00000480961 PFKFB3Q16875 520 aaPredicted RBP23.45■■□□□ 1.34
CTSA-206ENST00000480961 LHX8Q68G74 356 aa23.45■■□□□ 1.34
CTSA-206ENST00000480961 PSTPIP2Q9H939 334 aa23.45■■□□□ 1.34
CTSA-206ENST00000480961 ZNFX1Q9P2E3 1918 aaKnown RBP23.44■■□□□ 1.34
CTSA-206ENST00000480961 SCG2P13521 617 aa23.44■■□□□ 1.34
CTSA-206ENST00000480961 GJA8P48165 433 aa23.44■■□□□ 1.34
CTSA-206ENST00000480961 GHRHRQ02643 423 aa23.44■■□□□ 1.34
CTSA-206ENST00000480961 UBE2SQ16763 222 aa23.44■■□□□ 1.34
CTSA-206ENST00000480961 ARHGEF16Q5VV41 709 aa23.44■■□□□ 1.34
CTSA-206ENST00000480961 FBXO16Q8IX29 292 aaPredicted RBP23.44■■□□□ 1.34
CTSA-206ENST00000480961 LENG1Q96BZ8 264 aaPredicted RBP23.44■■□□□ 1.34
CTSA-206ENST00000480961 SHISA4Q96DD7 197 aa23.44■■□□□ 1.34
CTSA-206ENST00000480961 KATNBL1Q9H079 304 aa23.44■■□□□ 1.34
CTSA-206ENST00000480961 BARHL2Q9NY43 387 aa23.44■■□□□ 1.34
CTSA-206ENST00000480961 DDX20Q9UHI6 824 aaKnown RBP23.44■■□□□ 1.34
CTSA-206ENST00000480961 MEIS2O14770 477 aa23.43■■□□□ 1.34
CTSA-206ENST00000480961 SEPT4O43236 478 aa23.43■■□□□ 1.34
CTSA-206ENST00000480961 CTDNEP1O95476 244 aa23.43■■□□□ 1.34
CTSA-206ENST00000480961 PDE4DQ08499 809 aa23.43■■□□□ 1.34
CTSA-206ENST00000480961 CPLX2Q6PUV4 134 aaKnown RBP23.43■■□□□ 1.34
CTSA-206ENST00000480961 DNERQ8NFT8 737 aa23.43■■□□□ 1.34
CTSA-206ENST00000480961 SMARCC2Q8TAQ2 1214 aa23.43■■□□□ 1.34
CTSA-206ENST00000480961 NSUN6Q8TEA1 469 aaKnown RBP23.43■■□□□ 1.34
CTSA-206ENST00000480961 RNF26Q9BY78 433 aaPredicted RBP23.43■■□□□ 1.34
CTSA-206ENST00000480961 MAF1Q9H063 256 aa23.43■■□□□ 1.34
CTSA-206ENST00000480961 ABHD16BQ9H3Z7 469 aa23.43■■□□□ 1.34
CTSA-206ENST00000480961 PXMP2Q9NR77 195 aa23.43■■□□□ 1.34
CTSA-206ENST00000480961 PDGFCQ9NRA1 345 aa23.43■■□□□ 1.34
CTSA-206ENST00000480961 NRBP1Q9UHY1 535 aa23.43■■□□□ 1.34
CTSA-206ENST00000480961 LIMCH1Q9UPQ0 1083 aa23.43■■□□□ 1.34
CTSA-206ENST00000480961 TRIM22Q8IYM9 498 aa23.42■■□□□ 1.34
CTSA-206ENST00000480961 MORC4Q8TE76 937 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms