RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 NEK8Q86SG6 692 aa14.36□□□□□ -0.11
SIK3-209ENST00000480222 CHAMP1Q96JM3 812 aa14.36□□□□□ -0.11
SIK3-209ENST00000480222 P2RX7Q99572 595 aaKnown RBP14.36□□□□□ -0.11
SIK3-209ENST00000480222 NAP1L4Q99733 375 aaKnown RBP14.36□□□□□ -0.11
SIK3-209ENST00000480222 ANO3Q9BYT9 981 aa14.36□□□□□ -0.11
SIK3-209ENST00000480222 EHMT1Q9H9B1 1298 aa14.36□□□□□ -0.11
SIK3-209ENST00000480222 RNF146Q9NTX7 359 aa14.36□□□□□ -0.11
SIK3-209ENST00000480222 BIN2Q9UBW5 565 aaPredicted RBP14.36□□□□□ -0.11
SIK3-209ENST00000480222 FBXO40Q9UH90 709 aa14.36□□□□□ -0.11
SIK3-209ENST00000480222 RABGAP1Q9Y3P9 1069 aa14.36□□□□□ -0.11
SIK3-209ENST00000480222 PDHXO00330 501 aa14.35□□□□□ -0.11
SIK3-209ENST00000480222 ADAMTS3O15072 1205 aa14.35□□□□□ -0.11
SIK3-209ENST00000480222 STAT3P40763 770 aa14.35□□□□□ -0.11
SIK3-209ENST00000480222 GCLCP48506 637 aaPredicted RBP14.35□□□□□ -0.11
SIK3-209ENST00000480222 HSD17B4P51659 736 aa14.35□□□□□ -0.11
SIK3-209ENST00000480222 INHBEP58166 350 aa14.35□□□□□ -0.11
SIK3-209ENST00000480222 SREBF2Q12772 1141 aa14.35□□□□□ -0.11
SIK3-209ENST00000480222 MKRN3Q13064 507 aaKnown RBP14.35□□□□□ -0.11
SIK3-209ENST00000480222 STK38Q15208 465 aa14.35□□□□□ -0.11
SIK3-209ENST00000480222 SF3A1Q15459 793 aaKnown RBP14.35□□□□□ -0.11
SIK3-209ENST00000480222 USP17L6PQ6QN14 398 aa14.35□□□□□ -0.11
SIK3-209ENST00000480222 RIOX2Q8IUF8 465 aa14.35□□□□□ -0.11
SIK3-209ENST00000480222 LINC00301Q8NCQ3 95 aa14.35□□□□□ -0.11
SIK3-209ENST00000480222 CHST13Q8NET6 341 aa14.35□□□□□ -0.11
SIK3-209ENST00000480222 SMCR8Q8TEV9 937 aaPredicted RBP14.35□□□□□ -0.11
SIK3-209ENST00000480222 CLEC4DQ8WXI8 215 aa14.35□□□□□ -0.11
SIK3-209ENST00000480222 TRERF1Q96PN7 1200 aa14.35□□□□□ -0.11
SIK3-209ENST00000480222 FTOQ9C0B1 505 aaKnown RBP eCLIP14.35□□□□□ -0.11
SIK3-209ENST00000480222 ACAD9Q9H845 621 aa14.35□□□□□ -0.11
SIK3-209ENST00000480222 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.35□□□□□ -0.11
SIK3-209ENST00000480222 RCOR1Q9UKL0 485 aa14.35□□□□□ -0.11
SIK3-209ENST00000480222 SMCHD1A6NHR9 2005 aa14.34□□□□□ -0.11
SIK3-209ENST00000480222 FAM155AB1AL88 458 aaPredicted RBP14.34□□□□□ -0.11
SIK3-209ENST00000480222 PPP6R2O75170 966 aa14.34□□□□□ -0.11
SIK3-209ENST00000480222 SLC25A27O95847 323 aa14.34□□□□□ -0.11
SIK3-209ENST00000480222 CFBP00751 764 aa14.34□□□□□ -0.11
SIK3-209ENST00000480222 GCFC2P16383 781 aaKnown RBP14.34□□□□□ -0.11
SIK3-209ENST00000480222 TAL1P17542 331 aaPredicted RBP14.34□□□□□ -0.11
SIK3-209ENST00000480222 SREBF1P36956 1147 aa14.34□□□□□ -0.11
SIK3-209ENST00000480222 SLC39A14Q15043 492 aa14.34□□□□□ -0.11
SIK3-209ENST00000480222 INF2Q27J81 1249 aa14.34□□□□□ -0.11
SIK3-209ENST00000480222 NOM1Q5C9Z4 860 aaKnown RBP14.34□□□□□ -0.11
SIK3-209ENST00000480222 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.34□□□□□ -0.11
SIK3-209ENST00000480222 TBCKQ8TEA7 893 aa14.34□□□□□ -0.11
SIK3-209ENST00000480222 SPATC1LQ9H0A9 340 aa14.34□□□□□ -0.11
SIK3-209ENST00000480222 GDPD2Q9HCC8 539 aa14.34□□□□□ -0.11
SIK3-209ENST00000480222 CREBZFQ9NS37 354 aa14.34□□□□□ -0.11
SIK3-209ENST00000480222 TMEM260Q9NX78 707 aa14.34□□□□□ -0.11
SIK3-209ENST00000480222 TFIP11Q9UBB9 837 aaKnown RBP14.34□□□□□ -0.11
SIK3-209ENST00000480222 CLIC4Q9Y696 253 aa14.34□□□□□ -0.11
SIK3-209ENST00000480222 MYH7BA7E2Y1 1941 aa14.34□□□□□ -0.11
SIK3-209ENST00000480222 LAD1O00515 517 aa14.33□□□□□ -0.12
SIK3-209ENST00000480222 NFIBO00712 420 aa14.33□□□□□ -0.12
SIK3-209ENST00000480222 SPTLC2O15270 562 aa14.33□□□□□ -0.12
SIK3-209ENST00000480222 MBD3O95983 291 aa14.33□□□□□ -0.12
SIK3-209ENST00000480222 UBE2HP62256 183 aa14.33□□□□□ -0.12
SIK3-209ENST00000480222 CEBPZQ03701 1054 aaKnown RBP14.33□□□□□ -0.12
SIK3-209ENST00000480222 PLS1Q14651 629 aa14.33□□□□□ -0.12
SIK3-209ENST00000480222 PTPAQ15257 358 aa14.33□□□□□ -0.12
SIK3-209ENST00000480222 MOXD1Q6UVY6 613 aa14.33□□□□□ -0.12
SIK3-209ENST00000480222 FAM43AQ8N2R8 423 aa14.33□□□□□ -0.12
SIK3-209ENST00000480222 SHCBP1Q8NEM2 672 aa14.33□□□□□ -0.12
SIK3-209ENST00000480222 HOMER2Q9NSB8 354 aa14.33□□□□□ -0.12
SIK3-209ENST00000480222 LMBRD1Q9NUN5 540 aa14.33□□□□□ -0.12
SIK3-209ENST00000480222 BTBD7Q9P203 1132 aa14.33□□□□□ -0.12
SIK3-209ENST00000480222 PCDHB6Q9Y5E3 794 aa14.33□□□□□ -0.12
SIK3-209ENST00000480222 PFASO15067 1338 aa14.33□□□□□ -0.12
SIK3-209ENST00000480222 FRMPD4Q14CM0 1322 aa14.33□□□□□ -0.12
SIK3-209ENST00000480222 RASSF10A6NK89 507 aa14.32□□□□□ -0.12
SIK3-209ENST00000480222 PRPF40AO75400 957 aaKnown RBP14.32□□□□□ -0.12
SIK3-209ENST00000480222 CNMDO75829 334 aa14.32□□□□□ -0.12
SIK3-209ENST00000480222 HOXA13P31271 388 aaPredicted RBP14.32□□□□□ -0.12
SIK3-209ENST00000480222 USP11P51784 963 aa14.32□□□□□ -0.12
SIK3-209ENST00000480222 CCNA1P78396 465 aa14.32□□□□□ -0.12
SIK3-209ENST00000480222 ATP2C1P98194 919 aaPredicted RBP14.32□□□□□ -0.12
SIK3-209ENST00000480222 NBR1Q14596 966 aa14.32□□□□□ -0.12
SIK3-209ENST00000480222 MUM1L1Q5H9M0 696 aa14.32□□□□□ -0.12
SIK3-209ENST00000480222 PPP4R3AQ6IN85 833 aa14.32□□□□□ -0.12
SIK3-209ENST00000480222 RNF207Q6ZRF8 634 aa14.32□□□□□ -0.12
SIK3-209ENST00000480222 CRYGNQ8WXF5 182 aa14.32□□□□□ -0.12
SIK3-209ENST00000480222 PAGR1Q9BTK6 254 aa14.32□□□□□ -0.12
SIK3-209ENST00000480222 MORF4L1Q9UBU8 362 aa14.32□□□□□ -0.12
SIK3-209ENST00000480222 RIPK3Q9Y572 518 aa14.32□□□□□ -0.12
SIK3-209ENST00000480222 THSD7BQ9C0I4 1608 aa14.32□□□□□ -0.12
SIK3-209ENST00000480222 RPTORQ8N122 1335 aa14.32□□□□□ -0.12
SIK3-209ENST00000480222 GOLGA6L4A6NEF3 574 aa14.31□□□□□ -0.12
SIK3-209ENST00000480222 CYP2C8P10632 490 aa14.31□□□□□ -0.12
SIK3-209ENST00000480222 ATP2B1P20020 1258 aa14.31□□□□□ -0.12
SIK3-209ENST00000480222 ME1P48163 572 aa14.31□□□□□ -0.12
SIK3-209ENST00000480222 RPS6P62753 249 aaKnown RBP14.31□□□□□ -0.12
SIK3-209ENST00000480222 ERVK-9P63128 1117 aa14.31□□□□□ -0.12
SIK3-209ENST00000480222 ERVK-24P63145 666 aa14.31□□□□□ -0.12
SIK3-209ENST00000480222 ARHGAP4P98171 946 aa14.31□□□□□ -0.12
SIK3-209ENST00000480222 NOGQ13253 232 aa14.31□□□□□ -0.12
SIK3-209ENST00000480222 FAM110CQ1W6H9 321 aa14.31□□□□□ -0.12
SIK3-209ENST00000480222 SKOR2Q2VWA4 1001 aaPredicted RBP14.31□□□□□ -0.12
SIK3-209ENST00000480222 LETM2Q2VYF4 491 aa14.31□□□□□ -0.12
SIK3-209ENST00000480222 ARL6IP4Q66PJ3 421 aaKnown RBP14.31□□□□□ -0.12
SIK3-209ENST00000480222 POTEEQ6S8J3 1075 aa14.31□□□□□ -0.12
SIK3-209ENST00000480222 REM2Q8IYK8 340 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 345.7 ms