RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 BICD2Q8TD16 824 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 TBC1D5Q92609 795 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 TRIM47Q96LD4 638 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 ARHGAP39Q9C0H5 1083 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 MAF1Q9H063 256 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 ZMYND12Q9H0C1 365 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 RIC8AQ9NPQ8 531 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 A1CFQ9NQ94 594 aaKnown RBP12.86□□□□□ -0.35
CLDN11-205ENST00000480067 GJB4Q9NTQ9 266 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 MAP3K20Q9NYL2 800 aaKnown RBP12.86□□□□□ -0.35
CLDN11-205ENST00000480067 CYP39A1Q9NYL5 469 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 KCNJ14Q9UNX9 436 aa12.86□□□□□ -0.35
CLDN11-205ENST00000480067 A0A0G2JMZ2 1700 aa12.85□□□□□ -0.35
CLDN11-205ENST00000480067 ESYT2A0FGR8 921 aa12.85□□□□□ -0.35
CLDN11-205ENST00000480067 H3BQV1 296 aa12.85□□□□□ -0.35
CLDN11-205ENST00000480067 FOXN1O15353 648 aa12.85□□□□□ -0.35
CLDN11-205ENST00000480067 ADORA2AP29274 412 aa12.85□□□□□ -0.35
CLDN11-205ENST00000480067 CTGFP29279 349 aa12.85□□□□□ -0.35
CLDN11-205ENST00000480067 HOXA13P31271 388 aaPredicted RBP12.85□□□□□ -0.35
CLDN11-205ENST00000480067 CTCFP49711 727 aaPredicted RBP12.85□□□□□ -0.35
CLDN11-205ENST00000480067 SAFBQ15424 915 aaKnown RBP eCLIP12.85□□□□□ -0.35
CLDN11-205ENST00000480067 IFFO2Q5TF58 517 aa12.85□□□□□ -0.35
CLDN11-205ENST00000480067 USP17L6PQ6QN14 398 aa12.85□□□□□ -0.35
CLDN11-205ENST00000480067 DPP9Q86TI2 863 aa12.85□□□□□ -0.35
CLDN11-205ENST00000480067 TEX2Q8IWB9 1127 aa12.85□□□□□ -0.35
CLDN11-205ENST00000480067 FBXO18Q8NFZ0 1043 aa12.85□□□□□ -0.35
CLDN11-205ENST00000480067 NUDT12Q9BQG2 462 aa12.85□□□□□ -0.35
CLDN11-205ENST00000480067 PHF20Q9BVI0 1012 aa12.85□□□□□ -0.35
CLDN11-205ENST00000480067 BRMS1Q9HCU9 246 aa12.85□□□□□ -0.35
CLDN11-205ENST00000480067 SLC5A4Q9NY91 659 aa12.85□□□□□ -0.35
CLDN11-205ENST00000480067 POTEB2H3BUK9 544 aa12.84□□□□□ -0.35
CLDN11-205ENST00000480067 PIK3CDO00329 1044 aa12.84□□□□□ -0.35
CLDN11-205ENST00000480067 MEIS2O14770 477 aa12.84□□□□□ -0.35
CLDN11-205ENST00000480067 GNRH1P01148 92 aa12.84□□□□□ -0.35
CLDN11-205ENST00000480067 PGK2P07205 417 aa12.84□□□□□ -0.35
CLDN11-205ENST00000480067 HSD17B4P51659 736 aa12.84□□□□□ -0.35
CLDN11-205ENST00000480067 GUCY1B3Q02153 619 aa12.84□□□□□ -0.35
CLDN11-205ENST00000480067 GRB14Q14449 540 aa12.84□□□□□ -0.35
CLDN11-205ENST00000480067 KRT40Q6A162 431 aa12.84□□□□□ -0.35
CLDN11-205ENST00000480067 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.84□□□□□ -0.35
CLDN11-205ENST00000480067 FCHSD1Q86WN1 690 aa12.84□□□□□ -0.35
CLDN11-205ENST00000480067 SOCS4Q8WXH5 440 aa12.84□□□□□ -0.35
CLDN11-205ENST00000480067 SHISA4Q96DD7 197 aa12.84□□□□□ -0.35
CLDN11-205ENST00000480067 PCDHA4Q9UN74 947 aa12.84□□□□□ -0.35
CLDN11-205ENST00000480067 COL11A1P12107 1806 aaPredicted RBP12.84□□□□□ -0.35
CLDN11-205ENST00000480067 MMP1P03956 469 aa12.83□□□□□ -0.36
CLDN11-205ENST00000480067 HSPA8P11142 646 aaKnown RBP12.83□□□□□ -0.36
CLDN11-205ENST00000480067 LBX1P52954 281 aa12.83□□□□□ -0.36
CLDN11-205ENST00000480067 UBE2SQ16763 222 aa12.83□□□□□ -0.36
CLDN11-205ENST00000480067 MORN1Q5T089 497 aa12.83□□□□□ -0.36
CLDN11-205ENST00000480067 SLC30A10Q6XR72 485 aa12.83□□□□□ -0.36
CLDN11-205ENST00000480067 BLIDQ8IZY5 108 aa12.83□□□□□ -0.36
CLDN11-205ENST00000480067 REXO1Q8N1G1 1221 aaKnown RBP12.83□□□□□ -0.36
CLDN11-205ENST00000480067 SYTL5Q8TDW5 730 aaPredicted RBP12.83□□□□□ -0.36
CLDN11-205ENST00000480067 BIN2Q9UBW5 565 aaPredicted RBP12.83□□□□□ -0.36
CLDN11-205ENST00000480067 CENPFP49454 3210 aa12.83□□□□□ -0.36
CLDN11-205ENST00000480067 DNAJC25-GNG10A0A024R161 153 aa12.82□□□□□ -0.36
CLDN11-205ENST00000480067 SPDYE3A6NKU9 549 aa12.82□□□□□ -0.36
CLDN11-205ENST00000480067 KRT2P35908 639 aa12.82□□□□□ -0.36
CLDN11-205ENST00000480067 RGS2P41220 211 aa12.82□□□□□ -0.36
CLDN11-205ENST00000480067 CNTN2Q02246 1040 aa12.82□□□□□ -0.36
CLDN11-205ENST00000480067 GHRHRQ02643 423 aa12.82□□□□□ -0.36
CLDN11-205ENST00000480067 MAP2K5Q13163 448 aa12.82□□□□□ -0.36
CLDN11-205ENST00000480067 MCTP2Q6DN12 878 aa12.82□□□□□ -0.36
CLDN11-205ENST00000480067 RMDN3Q96TC7 470 aa12.82□□□□□ -0.36
CLDN11-205ENST00000480067 ADD3Q9UEY8 706 aaKnown RBP12.82□□□□□ -0.36
CLDN11-205ENST00000480067 GJD2Q9UKL4 321 aa12.82□□□□□ -0.36
CLDN11-205ENST00000480067 COBLO75128 1261 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 FOSP01100 380 aaPredicted RBP12.81□□□□□ -0.36
CLDN11-205ENST00000480067 PDIA4P13667 645 aaKnown RBP12.81□□□□□ -0.36
CLDN11-205ENST00000480067 CYP2B6P20813 491 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 SYT1P21579 422 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 FLT3LGP49771 235 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 CAP1Q01518 475 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 PRKCZQ05513 592 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 GNL2Q13823 731 aaKnown RBP12.81□□□□□ -0.36
CLDN11-205ENST00000480067 ARHGEF16Q5VV41 709 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 JAKMIP3Q5VZ66 844 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 DIS3L2Q8IYB7 885 aaKnown RBP12.81□□□□□ -0.36
CLDN11-205ENST00000480067 FAM133AQ8N9E0 248 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 DAGLBQ8NCG7 672 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 NSUN6Q8TEA1 469 aaKnown RBP12.81□□□□□ -0.36
CLDN11-205ENST00000480067 PURBQ96QR8 312 aaKnown RBP12.81□□□□□ -0.36
CLDN11-205ENST00000480067 SRRDQ9UH36 339 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 DIS3Q9Y2L1 958 aaKnown RBP12.81□□□□□ -0.36
CLDN11-205ENST00000480067 TRIM17Q9Y577 477 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 BTBD18B2RXH4 712 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 AP3B2Q13367 1082 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 NPY5RQ15761 445 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 ZNF792Q3KQV3 632 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 MCTP1Q6DN14 999 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 DNERQ8NFT8 737 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 USP6NLQ92738 828 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 TAAR1Q96RJ0 339 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 MPHOSPH6Q99547 160 aaKnown RBP12.81□□□□□ -0.36
CLDN11-205ENST00000480067 RNF39Q9H2S5 420 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 TMEM260Q9NX78 707 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 COL20A1Q9P218 1284 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 PCDHA6Q9UN73 950 aa12.81□□□□□ -0.36
CLDN11-205ENST00000480067 GABRQQ9UN88 632 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms