RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 ARVCFO00192 962 aa16.77■□□□□ 0.28
ATG4B-218ENST00000479554 DYNC1LI2O43237 492 aaPredicted RBP16.77■□□□□ 0.28
ATG4B-218ENST00000479554 FPGSQ05932 587 aa16.77■□□□□ 0.28
ATG4B-218ENST00000479554 USH1GQ495M9 461 aa16.77■□□□□ 0.28
ATG4B-218ENST00000479554 ASPRV1Q53RT3 343 aa16.77■□□□□ 0.28
ATG4B-218ENST00000479554 KIAA1211Q6ZU35 1233 aa16.77■□□□□ 0.28
ATG4B-218ENST00000479554 ANKS1AQ92625 1134 aa16.77■□□□□ 0.28
ATG4B-218ENST00000479554 UBAC1Q9BSL1 405 aa16.77■□□□□ 0.28
ATG4B-218ENST00000479554 CPVLQ9H3G5 476 aa16.77■□□□□ 0.28
ATG4B-218ENST00000479554 MTMR10Q9NXD2 777 aa16.77■□□□□ 0.28
ATG4B-218ENST00000479554 ZSWIM5Q9P217 1185 aa16.77■□□□□ 0.28
ATG4B-218ENST00000479554 TLR3O15455 904 aaKnown RBP16.76■□□□□ 0.27
ATG4B-218ENST00000479554 ZEB2O60315 1214 aa16.76■□□□□ 0.27
ATG4B-218ENST00000479554 CABYRO75952 493 aa16.76■□□□□ 0.27
ATG4B-218ENST00000479554 PTGS1P23219 599 aa16.76■□□□□ 0.27
ATG4B-218ENST00000479554 CDK7P50613 346 aa16.76■□□□□ 0.27
ATG4B-218ENST00000479554 RPS6P62753 249 aaKnown RBP16.76■□□□□ 0.27
ATG4B-218ENST00000479554 CDC37Q16543 378 aaPredicted RBP16.76■□□□□ 0.27
ATG4B-218ENST00000479554 CXCL17Q6UXB2 119 aa16.76■□□□□ 0.27
ATG4B-218ENST00000479554 RUFY2Q8WXA3 655 aa16.76■□□□□ 0.27
ATG4B-218ENST00000479554 MPHOSPH6Q99547 160 aaKnown RBP16.76■□□□□ 0.27
ATG4B-218ENST00000479554 TBX21Q9UL17 535 aa16.76■□□□□ 0.27
ATG4B-218ENST00000479554 Q9Y3F1 56 aa16.76■□□□□ 0.27
ATG4B-218ENST00000479554 TIMP1P01033 207 aa16.75■□□□□ 0.27
ATG4B-218ENST00000479554 PDE4DQ08499 809 aa16.75■□□□□ 0.27
ATG4B-218ENST00000479554 IFIT1BQ5T764 474 aaKnown RBP16.75■□□□□ 0.27
ATG4B-218ENST00000479554 FAM109BQ6ICB4 259 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-218ENST00000479554 FAM126BQ8IXS8 530 aa16.75■□□□□ 0.27
ATG4B-218ENST00000479554 RNPC3Q96LT9 517 aaKnown RBP16.75■□□□□ 0.27
ATG4B-218ENST00000479554 ABCB11O95342 1321 aa16.74■□□□□ 0.27
ATG4B-218ENST00000479554 DHX16O60231 1041 aaKnown RBP16.74■□□□□ 0.27
ATG4B-218ENST00000479554 PARP1P09874 1014 aaKnown RBP16.74■□□□□ 0.27
ATG4B-218ENST00000479554 EPHB4P54760 987 aa16.74■□□□□ 0.27
ATG4B-218ENST00000479554 DUSP28Q4G0W2 176 aa16.74■□□□□ 0.27
ATG4B-218ENST00000479554 TMEM63BQ5T3F8 832 aa16.74■□□□□ 0.27
ATG4B-218ENST00000479554 ZNF697Q5TEC3 545 aa16.74■□□□□ 0.27
ATG4B-218ENST00000479554 ADGRF4Q8IZF3 695 aa16.74■□□□□ 0.27
ATG4B-218ENST00000479554 DNERQ8NFT8 737 aa16.74■□□□□ 0.27
ATG4B-218ENST00000479554 WDR11Q9BZH6 1224 aa16.74■□□□□ 0.27
ATG4B-218ENST00000479554 STXBP5LQ9Y2K9 1186 aa16.74■□□□□ 0.27
ATG4B-218ENST00000479554 B4DLN1 442 aa16.73■□□□□ 0.27
ATG4B-218ENST00000479554 CHMLP26374 656 aa16.73■□□□□ 0.27
ATG4B-218ENST00000479554 MRPL12P52815 198 aaKnown RBP16.73■□□□□ 0.27
ATG4B-218ENST00000479554 TRDNQ13061 729 aa16.73■□□□□ 0.27
ATG4B-218ENST00000479554 ITGA7Q13683 1181 aa16.73■□□□□ 0.27
ATG4B-218ENST00000479554 MFSD5Q6N075 450 aa16.73■□□□□ 0.27
ATG4B-218ENST00000479554 RGS22Q8NE09 1264 aa16.73■□□□□ 0.27
ATG4B-218ENST00000479554 RBM47A0AV96 593 aaKnown RBP16.72■□□□□ 0.27
ATG4B-218ENST00000479554 EDNRBP24530 442 aa16.72■□□□□ 0.27
ATG4B-218ENST00000479554 SMAD3P84022 425 aaKnown RBP16.72■□□□□ 0.27
ATG4B-218ENST00000479554 PPP2R5BQ15173 497 aa16.72■□□□□ 0.27
ATG4B-218ENST00000479554 QRICH1Q2TAL8 776 aa16.72■□□□□ 0.27
ATG4B-218ENST00000479554 CYB5R4Q7L1T6 521 aa16.72■□□□□ 0.27
ATG4B-218ENST00000479554 CENPQQ7L2Z9 268 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-218ENST00000479554 SLC43A3Q8NBI5 491 aa16.72■□□□□ 0.27
ATG4B-218ENST00000479554 OR6J1Q8NGC5 347 aa16.72■□□□□ 0.27
ATG4B-218ENST00000479554 FAM161BQ96MY7 647 aa16.72■□□□□ 0.27
ATG4B-218ENST00000479554 SEZ6LQ9BYH1 1024 aa16.72■□□□□ 0.27
ATG4B-218ENST00000479554 PPP1R12CQ9BZL4 782 aa16.72■□□□□ 0.27
ATG4B-218ENST00000479554 MAF1Q9H063 256 aa16.72■□□□□ 0.27
ATG4B-218ENST00000479554 U3KPZ7 1027 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-218ENST00000479554 CD4P01730 458 aa16.71■□□□□ 0.27
ATG4B-218ENST00000479554 CPT1AP50416 773 aa16.71■□□□□ 0.27
ATG4B-218ENST00000479554 PTH1RQ03431 593 aa16.71■□□□□ 0.27
ATG4B-218ENST00000479554 PPIGQ13427 754 aaKnown RBP eCLIP16.71■□□□□ 0.271e-10■□□□□ 11
ATG4B-218ENST00000479554 SEC23AQ15436 765 aa16.71■□□□□ 0.27
ATG4B-218ENST00000479554 FBXO11Q86XK2 927 aa16.71■□□□□ 0.27
ATG4B-218ENST00000479554 MCF2L2Q86YR7 1114 aa16.71■□□□□ 0.27
ATG4B-218ENST00000479554 TMEM199Q8N511 208 aa16.71■□□□□ 0.27
ATG4B-218ENST00000479554 SLC17A8Q8NDX2 589 aa16.71■□□□□ 0.27
ATG4B-218ENST00000479554 SCFD2Q8WU76 684 aa16.71■□□□□ 0.27
ATG4B-218ENST00000479554 JMJD4Q9H9V9 463 aa16.71■□□□□ 0.27
ATG4B-218ENST00000479554 VAT1LQ9HCJ6 419 aa16.71■□□□□ 0.27
ATG4B-218ENST00000479554 POLR3EQ9NVU0 708 aa16.71■□□□□ 0.27
ATG4B-218ENST00000479554 MRPL11Q9Y3B7 192 aaKnown RBP16.71■□□□□ 0.27
ATG4B-218ENST00000479554 A0A0C4DFX4 3053 aa16.7■□□□□ 0.26
ATG4B-218ENST00000479554 NKRFO15226 690 aaKnown RBP eCLIP16.7■□□□□ 0.26
ATG4B-218ENST00000479554 CYP21A2P08686 494 aa16.7■□□□□ 0.26
ATG4B-218ENST00000479554 PSMC6P62333 389 aa16.7■□□□□ 0.26
ATG4B-218ENST00000479554 BRDTQ58F21 947 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-218ENST00000479554 RALYLQ86SE5 291 aaKnown RBP16.7■□□□□ 0.26
ATG4B-218ENST00000479554 GUCD1Q96NT3 240 aa16.7■□□□□ 0.26
ATG4B-218ENST00000479554 GRIN2DO15399 1336 aa16.7■□□□□ 0.26
ATG4B-218ENST00000479554 MYH6P13533 1939 aa16.69■□□□□ 0.26
ATG4B-218ENST00000479554 ERICH2A1L162 156 aa16.69■□□□□ 0.26
ATG4B-218ENST00000479554 SGSM2O43147 1006 aa16.69■□□□□ 0.26
ATG4B-218ENST00000479554 CSF2RAP15509 400 aa16.69■□□□□ 0.26
ATG4B-218ENST00000479554 CYP2C18P33260 490 aa16.69■□□□□ 0.26
ATG4B-218ENST00000479554 STAG2Q8N3U4 1231 aa16.69■□□□□ 0.26
ATG4B-218ENST00000479554 SYTL5Q8TDW5 730 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-218ENST00000479554 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.69■□□□□ 0.261e-7■□□□□ 11.3
ATG4B-218ENST00000479554 HIPK3Q9H422 1215 aa16.69■□□□□ 0.26
ATG4B-218ENST00000479554 GPHNQ9NQX3 736 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-218ENST00000479554 EYSQ5T1H1 3165 aa16.69■□□□□ 0.26
ATG4B-218ENST00000479554 KLRF2D3W0D1 207 aa16.68■□□□□ 0.26
ATG4B-218ENST00000479554 IFIT3O14879 490 aaKnown RBP16.68■□□□□ 0.26
ATG4B-218ENST00000479554 B4GALT4O60513 344 aa16.68■□□□□ 0.26
ATG4B-218ENST00000479554 MYL3P08590 195 aa16.68■□□□□ 0.26
ATG4B-218ENST00000479554 TXNP10599 105 aaKnown RBP16.68■□□□□ 0.26
ATG4B-218ENST00000479554 PURAQ00577 322 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms