RNA–Protein interactions for RNA: ENST00000479397.2

CNOT10-215, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 5

Gene CNOT10, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-215ENST00000479397 TMEM221A6NGB7 291 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 H3BQ06 376 aaPredicted RBP6.6□□□□□ -1.35
CNOT10-215ENST00000479397 M0R296 226 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 VWA5AO00534 786 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 CTAGE5O15320 804 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 PSEN2P49810 448 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 ERVK-21P61565 698 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 TFCP2Q12800 502 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 DMRTA1Q5VZB9 504 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 EP400NLQ6ZTU2 488 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 ARMCX2Q7L311 632 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 FBXL6Q8N531 539 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 RETREG2Q8NC44 543 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 RNF166Q96A37 237 aaPredicted RBP6.6□□□□□ -1.35
CNOT10-215ENST00000479397 PABPC5Q96DU9 382 aaKnown RBP6.6□□□□□ -1.35
CNOT10-215ENST00000479397 CRBNQ96SW2 442 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 RAD9AQ99638 391 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 TEX13BQ9BXU2 312 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 VCPKMTQ9H867 229 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 FAM86C1Q9NVL1 165 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 MUTYHQ9UIF7 546 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 TMX2Q9Y320 296 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 COL4A6Q14031 1691 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 KAT6AQ92794 2004 aa6.6□□□□□ -1.35
CNOT10-215ENST00000479397 LCHNA4D1U4 455 aa6.59□□□□□ -1.35
CNOT10-215ENST00000479397 PROB1E7EW31 1015 aa6.59□□□□□ -1.35
CNOT10-215ENST00000479397 NCK2O43639 380 aa6.59□□□□□ -1.35
CNOT10-215ENST00000479397 POLR3DP05423 398 aaPredicted RBP6.59□□□□□ -1.35
CNOT10-215ENST00000479397 IQCF3P0C7M6 154 aa6.59□□□□□ -1.35
CNOT10-215ENST00000479397 CYP2C9P11712 490 aa6.59□□□□□ -1.35
CNOT10-215ENST00000479397 CYP7A1P22680 504 aa6.59□□□□□ -1.35
CNOT10-215ENST00000479397 DYNLL1P63167 89 aaKnown RBP6.59□□□□□ -1.35
CNOT10-215ENST00000479397 ICA1Q05084 483 aa6.59□□□□□ -1.35
CNOT10-215ENST00000479397 BFSP2Q13515 415 aa6.59□□□□□ -1.35
CNOT10-215ENST00000479397 LRRFIP1Q32MZ4 808 aaKnown RBP6.59□□□□□ -1.35
CNOT10-215ENST00000479397 NBPF20Q3BBV1 942 aa6.59□□□□□ -1.35
CNOT10-215ENST00000479397 KIAA1755Q5JYT7 1200 aa6.59□□□□□ -1.35
CNOT10-215ENST00000479397 TTC39AQ5SRH9 613 aa6.59□□□□□ -1.35
CNOT10-215ENST00000479397 SNRNP48Q6IEG0 339 aaKnown RBP6.59□□□□□ -1.35
CNOT10-215ENST00000479397 TMED8Q6PL24 325 aaPredicted RBP6.59□□□□□ -1.35
CNOT10-215ENST00000479397 TRIM67Q6ZTA4 783 aa6.59□□□□□ -1.35
CNOT10-215ENST00000479397 SPRED2Q7Z698 418 aa6.59□□□□□ -1.35
CNOT10-215ENST00000479397 RNF135Q8IUD6 432 aa6.59□□□□□ -1.35
CNOT10-215ENST00000479397 CCDC144CPQ8IYA2 1237 aa6.59□□□□□ -1.35
CNOT10-215ENST00000479397 ZNF454Q8N9F8 522 aa6.59□□□□□ -1.35
CNOT10-215ENST00000479397 MRPL38Q96DV4 380 aaKnown RBP6.59□□□□□ -1.35
CNOT10-215ENST00000479397 PRKRIP1Q9H875 184 aaPredicted RBP6.59□□□□□ -1.35
CNOT10-215ENST00000479397 GOPCQ9HD26 462 aa6.59□□□□□ -1.35
CNOT10-215ENST00000479397 TRMT13Q9NUP7 481 aaKnown RBP6.59□□□□□ -1.35
CNOT10-215ENST00000479397 FBXO40Q9UH90 709 aa6.59□□□□□ -1.35
CNOT10-215ENST00000479397 PPP1R9AQ9ULJ8 1098 aa6.59□□□□□ -1.35
CNOT10-215ENST00000479397 ASTN1O14525 1302 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 KIAA1671Q9BY89 1806 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 LINC01553A4QN01 128 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 EFCAB14O75071 495 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 GJB5O95377 273 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 PLCD1P51178 756 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 FOSBP53539 338 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 WDR5P61964 334 aaKnown RBP6.58□□□□□ -1.36
CNOT10-215ENST00000479397 PSMC6P62333 389 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 GABPAQ06546 454 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 DDX10Q13206 875 aaKnown RBP6.58□□□□□ -1.36
CNOT10-215ENST00000479397 CAMK2BQ13554 666 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 SMAD2Q15796 467 aaKnown RBP6.58□□□□□ -1.36
CNOT10-215ENST00000479397 CCDC158Q5M9N0 1113 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 ADGRD1Q6QNK2 874 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.58□□□□□ -1.36
CNOT10-215ENST00000479397 ANKRD35Q8N283 1001 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 MRPL50Q8N5N7 158 aaKnown RBP6.58□□□□□ -1.36
CNOT10-215ENST00000479397 CCDC155Q8N6L0 562 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 BANK1Q8NDB2 785 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 REPS2Q8NFH8 660 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 SAMD11Q96NU1 681 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 SNRKQ9NRH2 765 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 FBXO28Q9NVF7 368 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 POLR3EQ9NVU0 708 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 CLDND1Q9NY35 253 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 SWAP70Q9UH65 585 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 GNEQ9Y223 722 aaKnown RBP6.58□□□□□ -1.36
CNOT10-215ENST00000479397 Q9Y3F1 56 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 CTDP1Q9Y5B0 961 aaPredicted RBP6.58□□□□□ -1.36
CNOT10-215ENST00000479397 CHD6Q8TD26 2715 aa6.58□□□□□ -1.36
CNOT10-215ENST00000479397 ACACBO00763 2458 aa6.57□□□□□ -1.36
CNOT10-215ENST00000479397 MYH6P13533 1939 aa6.57□□□□□ -1.36
CNOT10-215ENST00000479397 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.57□□□□□ -1.36
CNOT10-215ENST00000479397 ABHD14A-ACY1A0A1B0GW23 586 aa6.57□□□□□ -1.36
CNOT10-215ENST00000479397 PRR23AA6NEV1 266 aa6.57□□□□□ -1.36
CNOT10-215ENST00000479397 ASB14A6NK59 587 aa6.57□□□□□ -1.36
CNOT10-215ENST00000479397 DYNC1LI2O43237 492 aaPredicted RBP6.57□□□□□ -1.36
CNOT10-215ENST00000479397 SRGAP3O43295 1099 aa6.57□□□□□ -1.36
CNOT10-215ENST00000479397 RGS20O76081 388 aa6.57□□□□□ -1.36
CNOT10-215ENST00000479397 PARNO95453 639 aaKnown RBP6.57□□□□□ -1.36
CNOT10-215ENST00000479397 CYP2E1P05181 493 aaPredicted RBP6.57□□□□□ -1.36
CNOT10-215ENST00000479397 COL19A1Q14993 1142 aa6.57□□□□□ -1.36
CNOT10-215ENST00000479397 FAM47CQ5HY64 1035 aa6.57□□□□□ -1.36
CNOT10-215ENST00000479397 IQSEC1Q6DN90 963 aa6.57□□□□□ -1.36
CNOT10-215ENST00000479397 ASCL5Q7RTU5 278 aa6.57□□□□□ -1.36
CNOT10-215ENST00000479397 MIGA1Q8NAN2 632 aa6.57□□□□□ -1.36
CNOT10-215ENST00000479397 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.57□□□□□ -1.36
CNOT10-215ENST00000479397 CCDC17Q96LX7 622 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms