RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 TINF2Q9BSI4 451 aa28.86■■■□□ 2.21
PERM1-203ENST00000479361 RNF26Q9BY78 433 aaPredicted RBP28.86■■■□□ 2.21
PERM1-203ENST00000479361 PRPF3O43395 683 aaKnown RBP28.85■■■□□ 2.21
PERM1-203ENST00000479361 CFBP00751 764 aa28.85■■■□□ 2.21
PERM1-203ENST00000479361 IGHA2P01877 340 aa28.85■■■□□ 2.21
PERM1-203ENST00000479361 PRKAR2AP13861 404 aaKnown RBP28.85■■■□□ 2.21
PERM1-203ENST00000479361 CYP2C19P33261 490 aa28.85■■■□□ 2.21
PERM1-203ENST00000479361 SCRN1Q12765 414 aa28.85■■■□□ 2.21
PERM1-203ENST00000479361 MAMDC4Q6UXC1 1216 aa28.85■■■□□ 2.21
PERM1-203ENST00000479361 SYNGAP1Q96PV0 1343 aa28.85■■■□□ 2.21
PERM1-203ENST00000479361 CENPFP49454 3210 aa28.85■■■□□ 2.21
PERM1-203ENST00000479361 OPLAHO14841 1288 aa28.84■■■□□ 2.21
PERM1-203ENST00000479361 GHRHRQ02643 423 aa28.84■■■□□ 2.21
PERM1-203ENST00000479361 TRIM32Q13049 653 aa28.84■■■□□ 2.21
PERM1-203ENST00000479361 ME3Q16798 604 aa28.84■■■□□ 2.21
PERM1-203ENST00000479361 MAP3K21Q5TCX8 1036 aa28.84■■■□□ 2.21
PERM1-203ENST00000479361 PHKBQ93100 1093 aa28.84■■■□□ 2.21
PERM1-203ENST00000479361 SLC26A6Q9BXS9 759 aa28.84■■■□□ 2.21
PERM1-203ENST00000479361 PLXNA1Q9UIW2 1896 aa28.84■■■□□ 2.21
PERM1-203ENST00000479361 LOC102724159A0A0B4J2E5 919 aa28.83■■■□□ 2.21
PERM1-203ENST00000479361 SOWAHBA6NEL2 793 aa28.83■■■□□ 2.21
PERM1-203ENST00000479361 ASB14A6NK59 587 aa28.83■■■□□ 2.21
PERM1-203ENST00000479361 GCOM1H8Y6P7 765 aaPredicted RBP28.83■■■□□ 2.21
PERM1-203ENST00000479361 POLR2MP0CAP2 368 aa28.83■■■□□ 2.21
PERM1-203ENST00000479361 HSD17B4P51659 736 aa28.83■■■□□ 2.21
PERM1-203ENST00000479361 CACNB2Q08289 660 aaPredicted RBP28.83■■■□□ 2.21
PERM1-203ENST00000479361 SSRP1Q08945 709 aaKnown RBP28.83■■■□□ 2.21
PERM1-203ENST00000479361 PWP2Q15269 919 aaKnown RBP28.83■■■□□ 2.21
PERM1-203ENST00000479361 PFKFB3Q16875 520 aaPredicted RBP28.83■■■□□ 2.21
PERM1-203ENST00000479361 DNERQ8NFT8 737 aa28.83■■■□□ 2.21
PERM1-203ENST00000479361 TBC1D5Q92609 795 aa28.83■■■□□ 2.21
PERM1-203ENST00000479361 FGD4Q96M96 766 aa28.83■■■□□ 2.21
PERM1-203ENST00000479361 MPHOSPH6Q99547 160 aaKnown RBP28.83■■■□□ 2.21
PERM1-203ENST00000479361 HMX1Q9NP08 348 aaPredicted RBP28.83■■■□□ 2.21
PERM1-203ENST00000479361 RPTORQ8N122 1335 aa28.83■■■□□ 2.21
PERM1-203ENST00000479361 MYCP01106 439 aaPredicted RBP28.82■■■□□ 2.2
PERM1-203ENST00000479361 CCL5P13501 91 aa28.82■■■□□ 2.2
PERM1-203ENST00000479361 SCG2P13521 617 aa28.82■■■□□ 2.2
PERM1-203ENST00000479361 WWC2Q6AWC2 1192 aa28.82■■■□□ 2.2
PERM1-203ENST00000479361 PPP1R18Q6NYC8 613 aa28.82■■■□□ 2.2
PERM1-203ENST00000479361 SYTL5Q8TDW5 730 aaPredicted RBP28.82■■■□□ 2.2
PERM1-203ENST00000479361 GPKOWQ92917 476 aaPredicted RBP eCLIP28.82■■■□□ 2.2
PERM1-203ENST00000479361 GTF3C6Q969F1 213 aa28.82■■■□□ 2.2
PERM1-203ENST00000479361 ZSCAN31Q96LW9 406 aaPredicted RBP28.82■■■□□ 2.2
PERM1-203ENST00000479361 NRBP1Q9UHY1 535 aa28.82■■■□□ 2.2
PERM1-203ENST00000479361 CNPY2Q9Y2B0 182 aa28.82■■■□□ 2.2
PERM1-203ENST00000479361 RBBP6Q7Z6E9 1792 aaKnown RBP28.81■■■□□ 2.2
PERM1-203ENST00000479361 CCDC85CA6NKD9 419 aa28.81■■■□□ 2.2
PERM1-203ENST00000479361 B4DLN1 442 aa28.81■■■□□ 2.2
PERM1-203ENST00000479361 MRPL12P52815 198 aaKnown RBP28.81■■■□□ 2.2
PERM1-203ENST00000479361 NAPAP54920 295 aa28.81■■■□□ 2.2
PERM1-203ENST00000479361 MTFR1Q15390 333 aa28.81■■■□□ 2.2
PERM1-203ENST00000479361 CUL5Q93034 780 aa28.81■■■□□ 2.2
PERM1-203ENST00000479361 TMEM106CQ9BVX2 250 aa28.81■■■□□ 2.2
PERM1-203ENST00000479361 RNF208Q9H0X6 261 aa28.81■■■□□ 2.2
PERM1-203ENST00000479361 BARHL2Q9NY43 387 aa28.81■■■□□ 2.2
PERM1-203ENST00000479361 TEX2Q8IWB9 1127 aa28.8■■■□□ 2.2
PERM1-203ENST00000479361 NECAB1Q8N987 351 aa28.8■■■□□ 2.2
PERM1-203ENST00000479361 PURBQ96QR8 312 aaKnown RBP28.8■■■□□ 2.2
PERM1-203ENST00000479361 UNC93B1Q9H1C4 597 aa28.8■■■□□ 2.2
PERM1-203ENST00000479361 PSTPIP2Q9H939 334 aa28.8■■■□□ 2.2
PERM1-203ENST00000479361 SH2B1Q9NRF2 756 aaPredicted RBP28.8■■■□□ 2.2
PERM1-203ENST00000479361 ASTN1O14525 1302 aa28.79■■■□□ 2.2
PERM1-203ENST00000479361 LARGE1O95461 756 aa28.79■■■□□ 2.2
PERM1-203ENST00000479361 ALDH5A1P51649 535 aaPredicted RBP28.79■■■□□ 2.2
PERM1-203ENST00000479361 ARMCX2Q7L311 632 aa28.79■■■□□ 2.2
PERM1-203ENST00000479361 NSUN6Q8TEA1 469 aaKnown RBP28.79■■■□□ 2.2
PERM1-203ENST00000479361 CCDC12Q8WUD4 166 aaPredicted RBP28.79■■■□□ 2.2
PERM1-203ENST00000479361 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.79■■■□□ 2.2
PERM1-203ENST00000479361 STXBP3O00186 592 aa28.78■■■□□ 2.2
PERM1-203ENST00000479361 PIK3CDO00329 1044 aa28.78■■■□□ 2.2
PERM1-203ENST00000479361 DEXIO95424 95 aa28.78■■■□□ 2.2
PERM1-203ENST00000479361 CYBAP13498 195 aa28.78■■■□□ 2.2
PERM1-203ENST00000479361 HOXA13P31271 388 aaPredicted RBP28.78■■■□□ 2.2
PERM1-203ENST00000479361 MCM2P49736 904 aa28.78■■■□□ 2.2
PERM1-203ENST00000479361 PKN1Q16512 942 aa28.78■■■□□ 2.2
PERM1-203ENST00000479361 RMDN3Q96TC7 470 aa28.78■■■□□ 2.2
PERM1-203ENST00000479361 GLT8D2Q9H1C3 349 aa28.78■■■□□ 2.2
PERM1-203ENST00000479361 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.78■■■□□ 2.2
PERM1-203ENST00000479361 PPFIA3O75145 1194 aa28.77■■■□□ 2.2
PERM1-203ENST00000479361 SMARCC2Q8TAQ2 1214 aa28.77■■■□□ 2.2
PERM1-203ENST00000479361 ABHD16BQ9H3Z7 469 aa28.77■■■□□ 2.2
PERM1-203ENST00000479361 PAK6Q9NQU5 681 aaPredicted RBP28.77■■■□□ 2.2
PERM1-203ENST00000479361 COL20A1Q9P218 1284 aa28.77■■■□□ 2.2
PERM1-203ENST00000479361 STK36Q9NRP7 1315 aa28.76■■■□□ 2.19
PERM1-203ENST00000479361 SNAI1O95863 264 aaPredicted RBP28.76■■■□□ 2.19
PERM1-203ENST00000479361 CCND3P30281 292 aaPredicted RBP28.76■■■□□ 2.19
PERM1-203ENST00000479361 ARHGEF16Q5VV41 709 aa28.76■■■□□ 2.19
PERM1-203ENST00000479361 MORC4Q8TE76 937 aa28.76■■■□□ 2.19
PERM1-203ENST00000479361 TAAR1Q96RJ0 339 aa28.76■■■□□ 2.19
PERM1-203ENST00000479361 IWS1Q96ST2 819 aa28.76■■■□□ 2.19
PERM1-203ENST00000479361 GJB1P08034 283 aa28.75■■■□□ 2.19
PERM1-203ENST00000479361 CNGA1P29973 690 aa28.75■■■□□ 2.19
PERM1-203ENST00000479361 PDE4DQ08499 809 aa28.75■■■□□ 2.19
PERM1-203ENST00000479361 PRAMEF19Q5SWL8 479 aa28.75■■■□□ 2.19
PERM1-203ENST00000479361 FCHSD1Q86WN1 690 aa28.75■■■□□ 2.19
PERM1-203ENST00000479361 RIC8AQ9NPQ8 531 aa28.75■■■□□ 2.19
PERM1-203ENST00000479361 SMCO2A6NFE2 343 aa28.74■■■□□ 2.19
PERM1-203ENST00000479361 MEIS2O14770 477 aa28.74■■■□□ 2.19
PERM1-203ENST00000479361 MSCO60682 206 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms