RNA–Protein interactions for RNA: ENST00000479359.1

STAG3-213, Transcript of stromal antigen 3, human

TSL 5

Gene STAG3, Length 780 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STAG3-213	ENST00000479359	RBBP6	Q7Z6E9	1792 aa	Known RBP	12.41	□□□□□ -0.42
STAG3-213	ENST00000479359	PTPDC1	A2A3K4	754 aa		12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	SOWAHB	A6NEL2	793 aa		12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	PIK3CD	O00329	1044 aa		12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	OPLAH	O14841	1288 aa		12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	SEPT4	O43236	478 aa		12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	SNAI1	O95863	264 aa	Predicted RBP	12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	ZNF865	P0CJ78	1059 aa	Predicted RBP	12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	IFNAR1	P17181	557 aa		12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	RXRA	P19793	462 aa		12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	EDNRB	P24530	442 aa		12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	CNTN2	Q02246	1040 aa		12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	TRIM32	Q13049	653 aa		12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	LHX8	Q68G74	356 aa		12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	PPP1R18	Q6NYC8	613 aa		12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	HOMER1	Q86YM7	354 aa		12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	SYTL5	Q8TDW5	730 aa	Predicted RBP	12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	NSUN6	Q8TEA1	469 aa	Known RBP	12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	U2AF1L4	Q8WU68	220 aa	Known RBP	12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	IWS1	Q96ST2	819 aa		12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	C22orf23	Q9BZE7	217 aa		12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	GLT8D2	Q9H1C3	349 aa		12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	OGDHL	Q9ULD0	1010 aa		12.4	□□□□□ -0.42
STAG3-213	ENST00000479359	CNTNAP5	Q8WYK1	1306 aa		12.39	□□□□□ -0.43
STAG3-213	ENST00000479359	BAZ2B	Q9UIF8	2168 aa	Known RBP	12.39	□□□□□ -0.43
STAG3-213	ENST00000479359	GCOM1	H8Y6P7	765 aa	Predicted RBP	12.39	□□□□□ -0.43
STAG3-213	ENST00000479359	PRPF3	O43395	683 aa	Known RBP	12.39	□□□□□ -0.43
STAG3-213	ENST00000479359	POLR2M	P0CAP2	368 aa		12.39	□□□□□ -0.43
STAG3-213	ENST00000479359	CDC27	P30260	824 aa		12.39	□□□□□ -0.43
STAG3-213	ENST00000479359	ADD1	P35611	737 aa	Known RBP	12.39	□□□□□ -0.43
STAG3-213	ENST00000479359	NTRK3	Q16288	839 aa		12.39	□□□□□ -0.43
STAG3-213	ENST00000479359	ARMCX2	Q7L311	632 aa		12.39	□□□□□ -0.43
STAG3-213	ENST00000479359	CCDC144CP	Q8IYA2	1237 aa		12.39	□□□□□ -0.43
STAG3-213	ENST00000479359	TRPV1	Q8NER1	839 aa		12.39	□□□□□ -0.43
STAG3-213	ENST00000479359	DEFB118	Q96PH6	123 aa		12.39	□□□□□ -0.43
STAG3-213	ENST00000479359	VTA1	Q9NP79	307 aa		12.39	□□□□□ -0.43
STAG3-213	ENST00000479359	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.39	□□□□□ -0.43
STAG3-213	ENST00000479359	DDX20	Q9UHI6	824 aa	Known RBP	12.39	□□□□□ -0.43
STAG3-213	ENST00000479359	SMCHD1	A6NHR9	2005 aa		12.38	□□□□□ -0.43
STAG3-213	ENST00000479359	ASTN1	O14525	1302 aa		12.38	□□□□□ -0.43
STAG3-213	ENST00000479359	POTEF	A5A3E0	1075 aa		12.38	□□□□□ -0.43
STAG3-213	ENST00000479359	AKR1A1	P14550	325 aa		12.38	□□□□□ -0.43
STAG3-213	ENST00000479359	CALML3	P27482	149 aa		12.38	□□□□□ -0.43
STAG3-213	ENST00000479359	CCND3	P30281	292 aa	Predicted RBP	12.38	□□□□□ -0.43
STAG3-213	ENST00000479359	ALDH5A1	P51649	535 aa	Predicted RBP	12.38	□□□□□ -0.43
STAG3-213	ENST00000479359	NEK4	P51957	841 aa		12.38	□□□□□ -0.43
STAG3-213	ENST00000479359	ACVR2B	Q13705	512 aa		12.38	□□□□□ -0.43
STAG3-213	ENST00000479359	CPLX2	Q6PUV4	134 aa	Known RBP	12.38	□□□□□ -0.43
STAG3-213	ENST00000479359	SLC30A10	Q6XR72	485 aa		12.38	□□□□□ -0.43
STAG3-213	ENST00000479359	UBE2Q1	Q7Z7E8	422 aa		12.38	□□□□□ -0.43
STAG3-213	ENST00000479359	KIF2C	Q99661	725 aa		12.38	□□□□□ -0.43
STAG3-213	ENST00000479359	RNF26	Q9BY78	433 aa	Predicted RBP	12.38	□□□□□ -0.43
STAG3-213	ENST00000479359	KATNBL1	Q9H079	304 aa		12.38	□□□□□ -0.43
STAG3-213	ENST00000479359	BARHL2	Q9NY43	387 aa		12.38	□□□□□ -0.43
STAG3-213	ENST00000479359	FAM184B	Q9ULE4	1060 aa		12.38	□□□□□ -0.43
STAG3-213	ENST00000479359		V9GY48	417 aa	Predicted RBP	12.38	□□□□□ -0.43
STAG3-213	ENST00000479359	ESYT2	A0FGR8	921 aa		12.37	□□□□□ -0.43
STAG3-213	ENST00000479359	PFKFB2	O60825	505 aa		12.37	□□□□□ -0.43
STAG3-213	ENST00000479359	CDKL5	O76039	1030 aa		12.37	□□□□□ -0.43
STAG3-213	ENST00000479359	TAL1	P17542	331 aa	Predicted RBP	12.37	□□□□□ -0.43
STAG3-213	ENST00000479359	NKX3-2	P78367	333 aa		12.37	□□□□□ -0.43
STAG3-213	ENST00000479359	RABEP1	Q15276	862 aa		12.37	□□□□□ -0.43
STAG3-213	ENST00000479359	PFKFB3	Q16875	520 aa	Predicted RBP	12.37	□□□□□ -0.43
STAG3-213	ENST00000479359	XRRA1	Q6P2D8	792 aa		12.37	□□□□□ -0.43
STAG3-213	ENST00000479359	CMTR1	Q8N1G2	835 aa	Known RBP	12.37	□□□□□ -0.43
STAG3-213	ENST00000479359	SHISA4	Q96DD7	197 aa		12.37	□□□□□ -0.43
STAG3-213	ENST00000479359	RMDN3	Q96TC7	470 aa		12.37	□□□□□ -0.43
STAG3-213	ENST00000479359	BACH2	Q9BYV9	841 aa		12.37	□□□□□ -0.43
STAG3-213	ENST00000479359	PSTPIP2	Q9H939	334 aa		12.37	□□□□□ -0.43
STAG3-213	ENST00000479359	SH3GLB2	Q9NR46	395 aa		12.37	□□□□□ -0.43
STAG3-213	ENST00000479359	TPCN1	Q9ULQ1	816 aa		12.37	□□□□□ -0.43
STAG3-213	ENST00000479359	NAP1L2	Q9ULW6	460 aa	Predicted RBP	12.37	□□□□□ -0.43
STAG3-213	ENST00000479359		Q9Y3F1	56 aa		12.37	□□□□□ -0.43
STAG3-213	ENST00000479359	FRMPD4	Q14CM0	1322 aa		12.37	□□□□□ -0.43
STAG3-213	ENST00000479359	PLXNA1	Q9UIW2	1896 aa		12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	RBM47	A0AV96	593 aa	Known RBP	12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	MEIS2	O14770	477 aa		12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	DUSP11	O75319	330 aa	Known RBP	12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	STAM2	O75886	525 aa		12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	CFB	P00751	764 aa		12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	TFRC	P02786	760 aa	Known RBP	12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	SCG2	P13521	617 aa		12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	EN2	P19622	333 aa	Predicted RBP	12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	AK2	P54819	239 aa		12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	SOX10	P56693	466 aa		12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	MCTP2	Q6DN12	878 aa		12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	IQSEC1	Q6DN90	963 aa		12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	RAB11FIP4	Q86YS3	637 aa		12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	TRIM22	Q8IYM9	498 aa		12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	CCDC82	Q8N4S0	544 aa		12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	ARRDC4	Q8NCT1	418 aa		12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	CCDC12	Q8WUD4	166 aa	Predicted RBP	12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	TBC1D5	Q92609	795 aa		12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	CUL5	Q93034	780 aa		12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	TBC1D32	Q96NH3	1257 aa		12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	SLK	Q9H2G2	1235 aa	Predicted RBP	12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	COL20A1	Q9P218	1284 aa		12.36	□□□□□ -0.43
STAG3-213	ENST00000479359	CPLX1	O14810	134 aa		12.35	□□□□□ -0.43
STAG3-213	ENST00000479359	EIF3J	O75822	258 aa	Known RBP	12.35	□□□□□ -0.43
STAG3-213	ENST00000479359	FOS	P01100	380 aa	Predicted RBP	12.35	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms