RNA–Protein interactions for RNA: ENST00000479295.1

PTPN18-210, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-210ENST00000479295 PSMA5P28066 241 aa11.29□□□□□ -0.6
PTPN18-210ENST00000479295 ANAPC15P60006 121 aa11.29□□□□□ -0.6
PTPN18-210ENST00000479295 CCSAPQ6IQ19 270 aaPredicted RBP11.29□□□□□ -0.6
PTPN18-210ENST00000479295 TAPT1Q6NXT6 567 aa11.29□□□□□ -0.6
PTPN18-210ENST00000479295 BLOC1S2Q6QNY1 142 aa11.29□□□□□ -0.6
PTPN18-210ENST00000479295 NSMFQ6X4W1 530 aa11.29□□□□□ -0.6
PTPN18-210ENST00000479295 KLHDC9Q8NEP7 349 aa11.29□□□□□ -0.6
PTPN18-210ENST00000479295 SYTL5Q8TDW5 730 aaPredicted RBP11.29□□□□□ -0.6
PTPN18-210ENST00000479295 NUP133Q8WUM0 1156 aa11.29□□□□□ -0.6
PTPN18-210ENST00000479295 TBC1D5Q92609 795 aa11.29□□□□□ -0.6
PTPN18-210ENST00000479295 PAWRQ96IZ0 340 aaKnown RBP11.29□□□□□ -0.6
PTPN18-210ENST00000479295 JAKMIP1Q96N16 626 aaKnown RBP11.29□□□□□ -0.6
PTPN18-210ENST00000479295 VAT1LQ9HCJ6 419 aa11.29□□□□□ -0.6
PTPN18-210ENST00000479295 VTA1Q9NP79 307 aa11.29□□□□□ -0.6
PTPN18-210ENST00000479295 COL20A1Q9P218 1284 aa11.29□□□□□ -0.6
PTPN18-210ENST00000479295 FAM184BQ9ULE4 1060 aa11.29□□□□□ -0.6
PTPN18-210ENST00000479295 ADCY6O43306 1168 aa11.28□□□□□ -0.6
PTPN18-210ENST00000479295 EIF5BO60841 1220 aaKnown RBP11.28□□□□□ -0.6
PTPN18-210ENST00000479295 PLEKHA8P1O95397 391 aa11.28□□□□□ -0.6
PTPN18-210ENST00000479295 CPA1P15085 419 aa11.28□□□□□ -0.6
PTPN18-210ENST00000479295 CST5P28325 142 aaPredicted RBP11.28□□□□□ -0.6
PTPN18-210ENST00000479295 USH1GQ495M9 461 aa11.28□□□□□ -0.6
PTPN18-210ENST00000479295 NFXL1Q6ZNB6 911 aa11.28□□□□□ -0.6
PTPN18-210ENST00000479295 RUFY3Q7L099 469 aa11.28□□□□□ -0.6
PTPN18-210ENST00000479295 TEX2Q8IWB9 1127 aa11.28□□□□□ -0.6
PTPN18-210ENST00000479295 ARRDC4Q8NCT1 418 aa11.28□□□□□ -0.6
PTPN18-210ENST00000479295 TCEANC2Q96MN5 208 aa11.28□□□□□ -0.6
PTPN18-210ENST00000479295 UPF3AQ9H1J1 476 aaKnown RBP11.28□□□□□ -0.6
PTPN18-210ENST00000479295 ALDH8A1Q9H2A2 487 aaPredicted RBP11.28□□□□□ -0.6
PTPN18-210ENST00000479295 C11orf49Q9H6J7 331 aa11.28□□□□□ -0.6
PTPN18-210ENST00000479295 RBM28Q9NW13 759 aaKnown RBP11.28□□□□□ -0.6
PTPN18-210ENST00000479295 GNEQ9Y223 722 aaKnown RBP11.28□□□□□ -0.6
PTPN18-210ENST00000479295 Q9Y3F1 56 aa11.28□□□□□ -0.6
PTPN18-210ENST00000479295 PCDHA1Q9Y5I3 950 aa11.28□□□□□ -0.6
PTPN18-210ENST00000479295 MCM3APO60318 1980 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 PTPDC1A2A3K4 754 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 PIK3CDO00329 1044 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 CTAGE5O15320 804 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 ZBTB43O43298 467 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 RARBP10826 455 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 RXRAP19793 462 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 CNGA1P29973 690 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 GJA9P57773 515 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 SNX17Q15036 470 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 LRRC41Q15345 812 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 CCDC144BQ3MJ40 725 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 C1orf53Q5VUE5 145 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 IQSEC1Q6DN90 963 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 Q6ZUG5 572 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 TAAR1Q96RJ0 339 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 IWS1Q96ST2 819 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 TSEN34Q9BSV6 310 aaKnown RBP11.27□□□□□ -0.61
PTPN18-210ENST00000479295 HTATIP2Q9BUP3 242 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 PHF24Q9UPV7 400 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 PDE4DIPQ5VU43 2346 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 FRMPD4Q14CM0 1322 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 CNTNAP5Q8WYK1 1306 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 MYH6P13533 1939 aa11.27□□□□□ -0.61
PTPN18-210ENST00000479295 KLF18A0A0U1RQI7 1052 aa11.26□□□□□ -0.61
PTPN18-210ENST00000479295 DHX16O60231 1041 aaKnown RBP11.26□□□□□ -0.61
PTPN18-210ENST00000479295 CASTP20810 708 aaKnown RBP11.26□□□□□ -0.61
PTPN18-210ENST00000479295 CALML3P27482 149 aa11.26□□□□□ -0.61
PTPN18-210ENST00000479295 CDC27P30260 824 aa11.26□□□□□ -0.61
PTPN18-210ENST00000479295 TOB2Q14106 344 aaPredicted RBP11.26□□□□□ -0.61
PTPN18-210ENST00000479295 PRPF38BQ5VTL8 546 aaKnown RBP11.26□□□□□ -0.61
PTPN18-210ENST00000479295 SYNE3Q6ZMZ3 975 aa11.26□□□□□ -0.61
PTPN18-210ENST00000479295 MICU3Q86XE3 530 aa11.26□□□□□ -0.61
PTPN18-210ENST00000479295 HOMER1Q86YM7 354 aa11.26□□□□□ -0.61
PTPN18-210ENST00000479295 NSUN6Q8TEA1 469 aaKnown RBP11.26□□□□□ -0.61
PTPN18-210ENST00000479295 BRF1Q92994 677 aa11.26□□□□□ -0.61
PTPN18-210ENST00000479295 RRP36Q96EU6 259 aaKnown RBP11.26□□□□□ -0.61
PTPN18-210ENST00000479295 XPNPEP3Q9NQH7 507 aa11.26□□□□□ -0.61
PTPN18-210ENST00000479295 ZHX1Q9UKY1 873 aaPredicted RBP11.26□□□□□ -0.61
PTPN18-210ENST00000479295 ALPK3Q96L96 1907 aa11.26□□□□□ -0.61
PTPN18-210ENST00000479295 SYNRGQ9UMZ2 1314 aa11.26□□□□□ -0.61
PTPN18-210ENST00000479295 BAZ2BQ9UIF8 2168 aaKnown RBP11.26□□□□□ -0.61
PTPN18-210ENST00000479295 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.25□□□□□ -0.61
PTPN18-210ENST00000479295 B4DLN1 442 aa11.25□□□□□ -0.61
PTPN18-210ENST00000479295 MEIS2O14770 477 aa11.25□□□□□ -0.61
PTPN18-210ENST00000479295 SEC24BO95487 1268 aa11.25□□□□□ -0.61
PTPN18-210ENST00000479295 SMPD1P17405 629 aa11.25□□□□□ -0.61
PTPN18-210ENST00000479295 ADCYAP1R1P41586 468 aa11.25□□□□□ -0.61
PTPN18-210ENST00000479295 MRPL12P52815 198 aaKnown RBP11.25□□□□□ -0.61
PTPN18-210ENST00000479295 NTRK3Q16288 839 aa11.25□□□□□ -0.61
PTPN18-210ENST00000479295 RTN1Q16799 776 aa11.25□□□□□ -0.61
PTPN18-210ENST00000479295 C8orf34Q49A92 452 aa11.25□□□□□ -0.61
PTPN18-210ENST00000479295 DUSP28Q4G0W2 176 aa11.25□□□□□ -0.61
PTPN18-210ENST00000479295 RNF180Q86T96 592 aa11.25□□□□□ -0.61
PTPN18-210ENST00000479295 CMTR1Q8N1G2 835 aaKnown RBP11.25□□□□□ -0.61
PTPN18-210ENST00000479295 MPHOSPH6Q99547 160 aaKnown RBP11.25□□□□□ -0.61
PTPN18-210ENST00000479295 PXMP2Q9NR77 195 aa11.25□□□□□ -0.61
PTPN18-210ENST00000479295 PDGFCQ9NRA1 345 aa11.25□□□□□ -0.61
PTPN18-210ENST00000479295 DDX49Q9Y6V7 483 aaKnown RBP11.25□□□□□ -0.61
PTPN18-210ENST00000479295 CCDC196A0A1B0GTZ2 297 aa11.24□□□□□ -0.61
PTPN18-210ENST00000479295 MOXD2PA6NHM9 499 aa11.24□□□□□ -0.61
PTPN18-210ENST00000479295 GCOM1H8Y6P7 765 aaPredicted RBP11.24□□□□□ -0.61
PTPN18-210ENST00000479295 hCG_1984214I3L0E3 225 aa11.24□□□□□ -0.61
PTPN18-210ENST00000479295 PGK1P00558 417 aa11.24□□□□□ -0.61
PTPN18-210ENST00000479295 CFBP00751 764 aa11.24□□□□□ -0.61
PTPN18-210ENST00000479295 POLR2MP0CAP2 368 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms