RNA–Protein interactions for RNA: ENST00000479092.5

PTPN7-211, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-211ENST00000479092 SYNGAP1Q96PV0 1343 aa13.7□□□□□ -0.22
PTPN7-211ENST00000479092 ASB14A6NK59 587 aa13.7□□□□□ -0.22
PTPN7-211ENST00000479092 GCOM1H8Y6P7 765 aaPredicted RBP13.7□□□□□ -0.22
PTPN7-211ENST00000479092 POLR2MP0CAP2 368 aa13.7□□□□□ -0.22
PTPN7-211ENST00000479092 SCG2P13521 617 aa13.7□□□□□ -0.22
PTPN7-211ENST00000479092 CYP2C19P33261 490 aa13.7□□□□□ -0.22
PTPN7-211ENST00000479092 NAPAP54920 295 aa13.7□□□□□ -0.22
PTPN7-211ENST00000479092 SCRN1Q12765 414 aa13.7□□□□□ -0.22
PTPN7-211ENST00000479092 WWC2Q6AWC2 1192 aa13.7□□□□□ -0.22
PTPN7-211ENST00000479092 CCDC12Q8WUD4 166 aaPredicted RBP13.7□□□□□ -0.22
PTPN7-211ENST00000479092 CUL5Q93034 780 aa13.7□□□□□ -0.22
PTPN7-211ENST00000479092 GTF3C6Q969F1 213 aa13.7□□□□□ -0.22
PTPN7-211ENST00000479092 TINF2Q9BSI4 451 aa13.7□□□□□ -0.22
PTPN7-211ENST00000479092 TMEM106CQ9BVX2 250 aa13.7□□□□□ -0.22
PTPN7-211ENST00000479092 FLRT1Q9NZU1 646 aa13.7□□□□□ -0.22
PTPN7-211ENST00000479092 LIMCH1Q9UPQ0 1083 aa13.7□□□□□ -0.22
PTPN7-211ENST00000479092 CNPY2Q9Y2B0 182 aa13.7□□□□□ -0.22
PTPN7-211ENST00000479092 CCDC85CA6NKD9 419 aa13.69□□□□□ -0.22
PTPN7-211ENST00000479092 B4DLN1 442 aa13.69□□□□□ -0.22
PTPN7-211ENST00000479092 PRPF3O43395 683 aaKnown RBP13.69□□□□□ -0.22
PTPN7-211ENST00000479092 PPFIA3O75145 1194 aa13.69□□□□□ -0.22
PTPN7-211ENST00000479092 MRPL12P52815 198 aaKnown RBP13.69□□□□□ -0.22
PTPN7-211ENST00000479092 CNTN2Q02246 1040 aa13.69□□□□□ -0.22
PTPN7-211ENST00000479092 SSRP1Q08945 709 aaKnown RBP13.69□□□□□ -0.22
PTPN7-211ENST00000479092 NTRK3Q16288 839 aa13.69□□□□□ -0.22
PTPN7-211ENST00000479092 ME3Q16798 604 aa13.69□□□□□ -0.22
PTPN7-211ENST00000479092 PFKFB3Q16875 520 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-211ENST00000479092 SAMD3Q8N6K7 520 aa13.69□□□□□ -0.22
PTPN7-211ENST00000479092 ZSCAN31Q96LW9 406 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-211ENST00000479092 HMX1Q9NP08 348 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-211ENST00000479092 BARHL2Q9NY43 387 aa13.69□□□□□ -0.22
PTPN7-211ENST00000479092 MAP3K20Q9NYL2 800 aaKnown RBP13.69□□□□□ -0.22
PTPN7-211ENST00000479092 RPTORQ8N122 1335 aa13.68□□□□□ -0.22
PTPN7-211ENST00000479092 LOC102724159A0A0B4J2E5 919 aa13.68□□□□□ -0.22
PTPN7-211ENST00000479092 OPLAHO14841 1288 aa13.68□□□□□ -0.22
PTPN7-211ENST00000479092 DEXIO95424 95 aa13.68□□□□□ -0.22
PTPN7-211ENST00000479092 LARGE1O95461 756 aa13.68□□□□□ -0.22
PTPN7-211ENST00000479092 CCL5P13501 91 aa13.68□□□□□ -0.22
PTPN7-211ENST00000479092 MCM2P49736 904 aa13.68□□□□□ -0.22
PTPN7-211ENST00000479092 ALDH5A1P51649 535 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-211ENST00000479092 HSD17B4P51659 736 aa13.68□□□□□ -0.22
PTPN7-211ENST00000479092 CACNB2Q08289 660 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-211ENST00000479092 TRIM32Q13049 653 aa13.68□□□□□ -0.22
PTPN7-211ENST00000479092 PWP2Q15269 919 aaKnown RBP13.68□□□□□ -0.22
PTPN7-211ENST00000479092 MAP3K21Q5TCX8 1036 aa13.68□□□□□ -0.22
PTPN7-211ENST00000479092 MAMDC4Q6UXC1 1216 aa13.68□□□□□ -0.22
PTPN7-211ENST00000479092 ARMCX2Q7L311 632 aa13.68□□□□□ -0.22
PTPN7-211ENST00000479092 NECAB1Q8N987 351 aa13.68□□□□□ -0.22
PTPN7-211ENST00000479092 CCDC148Q8NFR7 591 aa13.68□□□□□ -0.22
PTPN7-211ENST00000479092 DNERQ8NFT8 737 aa13.68□□□□□ -0.22
PTPN7-211ENST00000479092 SYTL5Q8TDW5 730 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-211ENST00000479092 FGD4Q96M96 766 aa13.68□□□□□ -0.22
PTPN7-211ENST00000479092 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.68□□□□□ -0.22
PTPN7-211ENST00000479092 RNF208Q9H0X6 261 aa13.68□□□□□ -0.22
PTPN7-211ENST00000479092 PSTPIP2Q9H939 334 aa13.68□□□□□ -0.22
PTPN7-211ENST00000479092 SH2B1Q9NRF2 756 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-211ENST00000479092 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-211ENST00000479092 NRBP1Q9UHY1 535 aa13.68□□□□□ -0.22
PTPN7-211ENST00000479092 STK36Q9NRP7 1315 aa13.67□□□□□ -0.22
PTPN7-211ENST00000479092 SOWAHBA6NEL2 793 aa13.67□□□□□ -0.22
PTPN7-211ENST00000479092 STXBP3O00186 592 aa13.67□□□□□ -0.22
PTPN7-211ENST00000479092 CNGA1P29973 690 aa13.67□□□□□ -0.22
PTPN7-211ENST00000479092 HOXA13P31271 388 aaPredicted RBP13.67□□□□□ -0.22
PTPN7-211ENST00000479092 ADCY7P51828 1080 aa13.67□□□□□ -0.22
PTPN7-211ENST00000479092 GHRHRQ02643 423 aa13.67□□□□□ -0.22
PTPN7-211ENST00000479092 PDE4DQ08499 809 aa13.67□□□□□ -0.22
PTPN7-211ENST00000479092 MTFR1Q15390 333 aa13.67□□□□□ -0.22
PTPN7-211ENST00000479092 ARHGEF16Q5VV41 709 aa13.67□□□□□ -0.22
PTPN7-211ENST00000479092 SMARCC2Q8TAQ2 1214 aa13.67□□□□□ -0.22
PTPN7-211ENST00000479092 NSUN6Q8TEA1 469 aaKnown RBP13.67□□□□□ -0.22
PTPN7-211ENST00000479092 RMDN3Q96TC7 470 aa13.67□□□□□ -0.22
PTPN7-211ENST00000479092 GLT8D2Q9H1C3 349 aa13.67□□□□□ -0.22
PTPN7-211ENST00000479092 UNC93B1Q9H1C4 597 aa13.67□□□□□ -0.22
PTPN7-211ENST00000479092 ZHX1Q9UKY1 873 aaPredicted RBP13.67□□□□□ -0.22
PTPN7-211ENST00000479092 MYH6P13533 1939 aa13.66□□□□□ -0.22
PTPN7-211ENST00000479092 CYBAP13498 195 aa13.66□□□□□ -0.22
PTPN7-211ENST00000479092 FCHSD1Q86WN1 690 aa13.66□□□□□ -0.22
PTPN7-211ENST00000479092 TEX2Q8IWB9 1127 aa13.66□□□□□ -0.22
PTPN7-211ENST00000479092 CCDC83Q8IWF9 413 aa13.66□□□□□ -0.22
PTPN7-211ENST00000479092 WASF1Q92558 559 aa13.66□□□□□ -0.22
PTPN7-211ENST00000479092 TBC1D5Q92609 795 aa13.66□□□□□ -0.22
PTPN7-211ENST00000479092 PURBQ96QR8 312 aaKnown RBP13.66□□□□□ -0.22
PTPN7-211ENST00000479092 ABHD16BQ9H3Z7 469 aa13.66□□□□□ -0.22
PTPN7-211ENST00000479092 COL20A1Q9P218 1284 aa13.66□□□□□ -0.22
PTPN7-211ENST00000479092 BRCA2P51587 3418 aa13.66□□□□□ -0.22
PTPN7-211ENST00000479092 ASTN1O14525 1302 aa13.65□□□□□ -0.22
PTPN7-211ENST00000479092 DOCK3Q8IZD9 2030 aa13.65□□□□□ -0.22
PTPN7-211ENST00000479092 SPDYE3A6NKU9 549 aa13.65□□□□□ -0.22
PTPN7-211ENST00000479092 PIK3CDO00329 1044 aa13.65□□□□□ -0.22
PTPN7-211ENST00000479092 MSCO60682 206 aa13.65□□□□□ -0.22
PTPN7-211ENST00000479092 IGHA2P01877 340 aa13.65□□□□□ -0.22
PTPN7-211ENST00000479092 XBP1P17861 261 aa13.65□□□□□ -0.22
PTPN7-211ENST00000479092 EIF2AK2P19525 551 aaKnown RBP13.65□□□□□ -0.22
PTPN7-211ENST00000479092 CCND3P30281 292 aaPredicted RBP13.65□□□□□ -0.22
PTPN7-211ENST00000479092 ACVR2BQ13705 512 aa13.65□□□□□ -0.22
PTPN7-211ENST00000479092 PKN1Q16512 942 aa13.65□□□□□ -0.22
PTPN7-211ENST00000479092 USP17L6PQ6QN14 398 aa13.65□□□□□ -0.22
PTPN7-211ENST00000479092 DEFB118Q96PH6 123 aa13.65□□□□□ -0.22
PTPN7-211ENST00000479092 TAAR1Q96RJ0 339 aa13.65□□□□□ -0.22
PTPN7-211ENST00000479092 EHMT1Q9H9B1 1298 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms