RNA–Protein interactions for RNA: ENST00000479064.5

HPS4-211, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-211ENST00000479064 SHHQ15465 462 aa23.21■■□□□ 1.31
HPS4-211ENST00000479064 DUSP28Q4G0W2 176 aa23.21■■□□□ 1.31
HPS4-211ENST00000479064 SLC43A3Q8NBI5 491 aa23.21■■□□□ 1.31
HPS4-211ENST00000479064 ABCB11O95342 1321 aa23.2■■□□□ 1.3
HPS4-211ENST00000479064 TLR3O15455 904 aaKnown RBP23.2■■□□□ 1.3
HPS4-211ENST00000479064 TIMP1P01033 207 aa23.2■■□□□ 1.3
HPS4-211ENST00000479064 PARP1P09874 1014 aaKnown RBP23.2■■□□□ 1.3
HPS4-211ENST00000479064 GOLGA8HP0CJ92 632 aa23.2■■□□□ 1.3
HPS4-211ENST00000479064 EDNRBP24530 442 aa23.2■■□□□ 1.3
HPS4-211ENST00000479064 CHMLP26374 656 aa23.2■■□□□ 1.3
HPS4-211ENST00000479064 TRDNQ13061 729 aa23.2■■□□□ 1.3
HPS4-211ENST00000479064 SLC30A10Q6XR72 485 aa23.2■■□□□ 1.3
HPS4-211ENST00000479064 KIAA1211Q6ZU35 1233 aa23.2■■□□□ 1.3
HPS4-211ENST00000479064 VTI1AQ96AJ9 217 aa23.2■■□□□ 1.3
HPS4-211ENST00000479064 PURBQ96QR8 312 aaKnown RBP23.2■■□□□ 1.3
HPS4-211ENST00000479064 PDGFCQ9NRA1 345 aa23.2■■□□□ 1.3
HPS4-211ENST00000479064 MTMR10Q9NXD2 777 aa23.2■■□□□ 1.3
HPS4-211ENST00000479064 U3KPZ7 1027 aaPredicted RBP23.2■■□□□ 1.3
HPS4-211ENST00000479064 DYNC1LI2O43237 492 aaPredicted RBP23.19■■□□□ 1.3
HPS4-211ENST00000479064 CALML3P27482 149 aa23.19■■□□□ 1.3
HPS4-211ENST00000479064 BEX3Q00994 111 aa23.19■■□□□ 1.3
HPS4-211ENST00000479064 FPGSQ05932 587 aa23.19■■□□□ 1.3
HPS4-211ENST00000479064 CDC37Q16543 378 aaPredicted RBP23.19■■□□□ 1.3
HPS4-211ENST00000479064 C9orf50Q5SZB4 431 aa23.19■■□□□ 1.3
HPS4-211ENST00000479064 IFIT1BQ5T764 474 aaKnown RBP23.19■■□□□ 1.3
HPS4-211ENST00000479064 EEPD1Q7L9B9 569 aa23.19■■□□□ 1.3
HPS4-211ENST00000479064 FAM126BQ8IXS8 530 aa23.19■■□□□ 1.3
HPS4-211ENST00000479064 UBA5Q9GZZ9 404 aa23.19■■□□□ 1.3
HPS4-211ENST00000479064 NKRFO15226 690 aaKnown RBP eCLIP23.18■■□□□ 1.3
HPS4-211ENST00000479064 SEC23AQ15436 765 aa23.18■■□□□ 1.3
HPS4-211ENST00000479064 ADGRF4Q8IZF3 695 aa23.18■■□□□ 1.3
HPS4-211ENST00000479064 WDR11Q9BZH6 1224 aa23.18■■□□□ 1.3
HPS4-211ENST00000479064 CD4P01730 458 aa23.17■■□□□ 1.3
HPS4-211ENST00000479064 SMAD3P84022 425 aaKnown RBP23.17■■□□□ 1.3
HPS4-211ENST00000479064 PDE4DQ08499 809 aa23.17■■□□□ 1.3
HPS4-211ENST00000479064 MFSD5Q6N075 450 aa23.17■■□□□ 1.3
HPS4-211ENST00000479064 CXCL17Q6UXB2 119 aa23.17■■□□□ 1.3
HPS4-211ENST00000479064 MCF2L2Q86YR7 1114 aa23.17■■□□□ 1.3
HPS4-211ENST00000479064 STXBP5LQ9Y2K9 1186 aa23.17■■□□□ 1.3
HPS4-211ENST00000479064 DDX49Q9Y6V7 483 aaKnown RBP23.17■■□□□ 1.3
HPS4-211ENST00000479064 SGSM2O43147 1006 aa23.16■■□□□ 1.3
HPS4-211ENST00000479064 USH1GQ495M9 461 aa23.16■■□□□ 1.3
HPS4-211ENST00000479064 Q7L0L9 218 aa23.16■■□□□ 1.3
HPS4-211ENST00000479064 SCFD2Q8WU76 684 aa23.16■■□□□ 1.3
HPS4-211ENST00000479064 CPVLQ9H3G5 476 aa23.16■■□□□ 1.3
HPS4-211ENST00000479064 POLR3EQ9NVU0 708 aa23.16■■□□□ 1.3
HPS4-211ENST00000479064 MRPL11Q9Y3B7 192 aaKnown RBP23.16■■□□□ 1.3
HPS4-211ENST00000479064 CYP21A2P08686 494 aa23.15■■□□□ 1.3
HPS4-211ENST00000479064 CPT1AP50416 773 aa23.15■■□□□ 1.3
HPS4-211ENST00000479064 IRX6P78412 446 aaPredicted RBP23.15■■□□□ 1.3
HPS4-211ENST00000479064 PPIGQ13427 754 aaKnown RBP eCLIP23.15■■□□□ 1.3
HPS4-211ENST00000479064 ITGA7Q13683 1181 aa23.15■■□□□ 1.3
HPS4-211ENST00000479064 QRICH1Q2TAL8 776 aa23.15■■□□□ 1.3
HPS4-211ENST00000479064 JMJD4Q9H9V9 463 aa23.15■■□□□ 1.3
HPS4-211ENST00000479064 PTH1RQ03431 593 aa23.14■■□□□ 1.29
HPS4-211ENST00000479064 BRDTQ58F21 947 aaPredicted RBP23.14■■□□□ 1.29
HPS4-211ENST00000479064 FBXO11Q86XK2 927 aa23.14■■□□□ 1.29
HPS4-211ENST00000479064 SAMD3Q8N6K7 520 aa23.14■■□□□ 1.29
HPS4-211ENST00000479064 MTMR8Q96EF0 704 aa23.14■■□□□ 1.29
HPS4-211ENST00000479064 SCN10AQ9Y5Y9 1956 aa23.14■■□□□ 1.29
HPS4-211ENST00000479064 EPHB4P54760 987 aa23.13■■□□□ 1.29
HPS4-211ENST00000479064 GHRHRQ02643 423 aa23.13■■□□□ 1.29
HPS4-211ENST00000479064 TRAF1Q13077 416 aa23.13■■□□□ 1.29
HPS4-211ENST00000479064 PPP2R5BQ15173 497 aa23.13■■□□□ 1.29
HPS4-211ENST00000479064 ZNF697Q5TEC3 545 aa23.13■■□□□ 1.29
HPS4-211ENST00000479064 CYB5R4Q7L1T6 521 aa23.13■■□□□ 1.29
HPS4-211ENST00000479064 TMEM199Q8N511 208 aa23.13■■□□□ 1.29
HPS4-211ENST00000479064 NCOA7Q8NI08 942 aa23.13■■□□□ 1.29
HPS4-211ENST00000479064 NSUN6Q8TEA1 469 aaKnown RBP23.13■■□□□ 1.29
HPS4-211ENST00000479064 RNPC3Q96LT9 517 aaKnown RBP23.13■■□□□ 1.29
HPS4-211ENST00000479064 IWS1Q96ST2 819 aa23.13■■□□□ 1.29
HPS4-211ENST00000479064 AMNQ9BXJ7 453 aa23.13■■□□□ 1.29
HPS4-211ENST00000479064 MAP3K20Q9NYL2 800 aaKnown RBP23.13■■□□□ 1.29
HPS4-211ENST00000479064 KIAA1217Q5T5P2 1943 aa23.13■■□□□ 1.29
HPS4-211ENST00000479064 GRIN2DO15399 1336 aa23.12■■□□□ 1.29
HPS4-211ENST00000479064 TMEM265A0A087WTH1 108 aa23.12■■□□□ 1.29
HPS4-211ENST00000479064 ERICH2A1L162 156 aa23.12■■□□□ 1.29
HPS4-211ENST00000479064 PALM3A6NDB9 673 aaPredicted RBP23.12■■□□□ 1.29
HPS4-211ENST00000479064 DHX16O60231 1041 aaKnown RBP23.12■■□□□ 1.29
HPS4-211ENST00000479064 KPNA6O60684 536 aa23.12■■□□□ 1.29
HPS4-211ENST00000479064 SART3Q15020 963 aaKnown RBP23.12■■□□□ 1.29
HPS4-211ENST00000479064 TMEM63BQ5T3F8 832 aa23.12■■□□□ 1.29
HPS4-211ENST00000479064 RALYLQ86SE5 291 aaKnown RBP23.12■■□□□ 1.29
HPS4-211ENST00000479064 SYTL5Q8TDW5 730 aaPredicted RBP23.12■■□□□ 1.29
HPS4-211ENST00000479064 MAP4K1Q92918 833 aa23.12■■□□□ 1.29
HPS4-211ENST00000479064 MAD2L2Q9UI95 211 aa23.12■■□□□ 1.29
HPS4-211ENST00000479064 KLRF2D3W0D1 207 aa23.11■■□□□ 1.29
HPS4-211ENST00000479064 TTLL4Q14679 1199 aa23.11■■□□□ 1.29
HPS4-211ENST00000479064 STAG2Q8N3U4 1231 aa23.11■■□□□ 1.29
HPS4-211ENST00000479064 OR6J1Q8NGC5 347 aa23.11■■□□□ 1.29
HPS4-211ENST00000479064 MTA3Q9BTC8 594 aa23.11■■□□□ 1.29
HPS4-211ENST00000479064 LAMA2P24043 3122 aaKnown RBP23.11■■□□□ 1.29
HPS4-211ENST00000479064 A6NJR5 290 aa23.1■■□□□ 1.29
HPS4-211ENST00000479064 E7EWF7 191 aa23.1■■□□□ 1.29
HPS4-211ENST00000479064 ZBTB5O15062 677 aa23.1■■□□□ 1.29
HPS4-211ENST00000479064 PTGS1P23219 599 aa23.1■■□□□ 1.29
HPS4-211ENST00000479064 PURAQ00577 322 aaKnown RBP23.1■■□□□ 1.29
HPS4-211ENST00000479064 PSRC1Q6PGN9 363 aaPredicted RBP23.1■■□□□ 1.29
HPS4-211ENST00000479064 BAZ2BQ9UIF8 2168 aaKnown RBP23.09■■□□□ 1.29
HPS4-211ENST00000479064 COL6A3P12111 3177 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms