RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 PITPNM1O00562 1244 aa17.15■□□□□ 0.34
USP11-207ENST00000478596 CDC45O75419 566 aa17.15■□□□□ 0.34
USP11-207ENST00000478596 AKR1B1P15121 316 aa17.15■□□□□ 0.34
USP11-207ENST00000478596 ERVK-21P61565 698 aa17.15■□□□□ 0.34
USP11-207ENST00000478596 BMP8AQ7Z5Y6 402 aa17.15■□□□□ 0.34
USP11-207ENST00000478596 ADHFE1Q8IWW8 467 aa17.15■□□□□ 0.34
USP11-207ENST00000478596 AP5M1Q9H0R1 490 aa17.15■□□□□ 0.34
USP11-207ENST00000478596 MCM9Q9NXL9 1143 aa17.15■□□□□ 0.34
USP11-207ENST00000478596 Q9Y3F1 56 aa17.15■□□□□ 0.34
USP11-207ENST00000478596 TNKSO95271 1327 aa17.15■□□□□ 0.34
USP11-207ENST00000478596 ZNF532Q9HCE3 1301 aa17.15■□□□□ 0.34
USP11-207ENST00000478596 RNF113AO15541 343 aaKnown RBP17.14■□□□□ 0.33
USP11-207ENST00000478596 IQCF3P0C7M6 154 aa17.14■□□□□ 0.33
USP11-207ENST00000478596 PKN1Q16512 942 aa17.14■□□□□ 0.33
USP11-207ENST00000478596 HERC4Q5GLZ8 1057 aaPredicted RBP17.14■□□□□ 0.33
USP11-207ENST00000478596 IER5LQ5T953 404 aa17.14■□□□□ 0.33
USP11-207ENST00000478596 ANKRD35Q8N283 1001 aa17.14■□□□□ 0.33
USP11-207ENST00000478596 CCDC17Q96LX7 622 aa17.14■□□□□ 0.33
USP11-207ENST00000478596 TGS1Q96RS0 853 aaKnown RBP17.14■□□□□ 0.33
USP11-207ENST00000478596 SLF1Q9BQI6 1058 aa17.14■□□□□ 0.33
USP11-207ENST00000478596 GOPCQ9HD26 462 aa17.14■□□□□ 0.33
USP11-207ENST00000478596 DYNC1LI2O43237 492 aaPredicted RBP17.13■□□□□ 0.33
USP11-207ENST00000478596 EEF2P13639 858 aaKnown RBP17.13■□□□□ 0.33
USP11-207ENST00000478596 ADD2P35612 726 aa17.13■□□□□ 0.33
USP11-207ENST00000478596 KCNJ6P48051 423 aa17.13■□□□□ 0.33
USP11-207ENST00000478596 TCF15Q12870 199 aa17.13■□□□□ 0.33
USP11-207ENST00000478596 FAM83BQ5T0W9 1011 aa17.13■□□□□ 0.33
USP11-207ENST00000478596 RUFY2Q8WXA3 655 aa17.13■□□□□ 0.33
USP11-207ENST00000478596 FTOQ9C0B1 505 aaKnown RBP eCLIP17.13■□□□□ 0.33
USP11-207ENST00000478596 FBXO40Q9UH90 709 aa17.13■□□□□ 0.33
USP11-207ENST00000478596 H3BQ06 376 aaPredicted RBP17.12■□□□□ 0.33
USP11-207ENST00000478596 SMPD1P17405 629 aa17.12■□□□□ 0.33
USP11-207ENST00000478596 IRS1P35568 1242 aa17.12■□□□□ 0.33
USP11-207ENST00000478596 COL19A1Q14993 1142 aa17.12■□□□□ 0.33
USP11-207ENST00000478596 ERMP1Q7Z2K6 904 aa17.12■□□□□ 0.33
USP11-207ENST00000478596 APPBP2Q92624 585 aa17.12■□□□□ 0.33
USP11-207ENST00000478596 KANSL2Q9H9L4 492 aa17.12■□□□□ 0.33
USP11-207ENST00000478596 MTUS1Q9ULD2 1270 aa17.12■□□□□ 0.33
USP11-207ENST00000478596 MAGEB6P1A0A0J9YX57 407 aa17.11■□□□□ 0.33
USP11-207ENST00000478596 WDR5P61964 334 aaKnown RBP17.11■□□□□ 0.33
USP11-207ENST00000478596 NMIQ13287 307 aaPredicted RBP17.11■□□□□ 0.33
USP11-207ENST00000478596 CWC27Q6UX04 472 aaKnown RBP17.11■□□□□ 0.33
USP11-207ENST00000478596 RETREG2Q8NC44 543 aa17.11■□□□□ 0.33
USP11-207ENST00000478596 CHST13Q8NET6 341 aa17.11■□□□□ 0.33
USP11-207ENST00000478596 RAD9AQ99638 391 aa17.11■□□□□ 0.33
USP11-207ENST00000478596 ZBED2Q9BTP6 218 aa17.11■□□□□ 0.33
USP11-207ENST00000478596 CRNKL1Q9BZJ0 848 aaKnown RBP17.11■□□□□ 0.33
USP11-207ENST00000478596 DCP1AQ9NPI6 582 aaPredicted RBP17.11■□□□□ 0.33
USP11-207ENST00000478596 MYO15AQ9UKN7 3530 aa17.1■□□□□ 0.33
USP11-207ENST00000478596 LINC01553A4QN01 128 aa17.1■□□□□ 0.33
USP11-207ENST00000478596 MBD4O95243 580 aa17.1■□□□□ 0.33
USP11-207ENST00000478596 CYP2D6P10635 497 aa17.1■□□□□ 0.33
USP11-207ENST00000478596 PTGS1P23219 599 aa17.1■□□□□ 0.33
USP11-207ENST00000478596 MFAP1P55081 439 aaKnown RBP17.1■□□□□ 0.33
USP11-207ENST00000478596 UBE3CQ15386 1083 aa17.1■□□□□ 0.33
USP11-207ENST00000478596 IQSEC1Q6DN90 963 aa17.1■□□□□ 0.33
USP11-207ENST00000478596 FAM133AQ8N9E0 248 aa17.1■□□□□ 0.33
USP11-207ENST00000478596 PRPF38AQ8NAV1 312 aaKnown RBP17.1■□□□□ 0.33
USP11-207ENST00000478596 EDAQ92838 391 aa17.1■□□□□ 0.33
USP11-207ENST00000478596 PABPC5Q96DU9 382 aaKnown RBP17.1■□□□□ 0.33
USP11-207ENST00000478596 MRPL38Q96DV4 380 aaKnown RBP17.1■□□□□ 0.33
USP11-207ENST00000478596 DYNLL2Q96FJ2 89 aa17.1■□□□□ 0.33
USP11-207ENST00000478596 CTNNA3Q9UI47 895 aa17.1■□□□□ 0.33
USP11-207ENST00000478596 MUTYHQ9UIF7 546 aa17.1■□□□□ 0.33
USP11-207ENST00000478596 A0A0D9SFI3 127 aa17.09■□□□□ 0.33
USP11-207ENST00000478596 ASB14A6NK59 587 aa17.09■□□□□ 0.33
USP11-207ENST00000478596 GJB5O95377 273 aa17.09■□□□□ 0.33
USP11-207ENST00000478596 CNTN2Q02246 1040 aa17.09■□□□□ 0.33
USP11-207ENST00000478596 SLFNL1Q499Z3 407 aa17.09■□□□□ 0.33
USP11-207ENST00000478596 CPXCR1Q8N123 301 aa17.09■□□□□ 0.33
USP11-207ENST00000478596 FAM227BQ96M60 508 aa17.09■□□□□ 0.33
USP11-207ENST00000478596 BAZ2AQ9UIF9 1905 aaKnown RBP17.09■□□□□ 0.33
USP11-207ENST00000478596 SCN5AQ14524 2016 aa17.09■□□□□ 0.33
USP11-207ENST00000478596 RAD50Q92878 1312 aa17.08■□□□□ 0.32
USP11-207ENST00000478596 ZBED4O75132 1171 aa17.08■□□□□ 0.32
USP11-207ENST00000478596 CHGBP05060 677 aa17.08■□□□□ 0.32
USP11-207ENST00000478596 CHMLP26374 656 aa17.08■□□□□ 0.32
USP11-207ENST00000478596 BFSP2Q13515 415 aa17.08■□□□□ 0.32
USP11-207ENST00000478596 TIGD5Q53EQ6 642 aa17.08■□□□□ 0.32
USP11-207ENST00000478596 ZMYM1Q5SVZ6 1142 aa17.08■□□□□ 0.32
USP11-207ENST00000478596 TMCO2Q7Z6W1 182 aaPredicted RBP17.08■□□□□ 0.32
USP11-207ENST00000478596 DDRGK1Q96HY6 314 aa17.08■□□□□ 0.32
USP11-207ENST00000478596 POP1Q99575 1024 aaKnown RBP17.08■□□□□ 0.32
USP11-207ENST00000478596 IRF2BPLQ9H1B7 796 aa17.08■□□□□ 0.32
USP11-207ENST00000478596 SLC38A10Q9HBR0 1119 aa17.08■□□□□ 0.32
USP11-207ENST00000478596 ALG13Q9NP73 1137 aaKnown RBP17.08■□□□□ 0.32
USP11-207ENST00000478596 POLR3EQ9NVU0 708 aa17.08■□□□□ 0.32
USP11-207ENST00000478596 DCHS1Q96JQ0 3298 aa17.08■□□□□ 0.32
USP11-207ENST00000478596 CACNA1HO95180 2353 aa17.07■□□□□ 0.32
USP11-207ENST00000478596 TECTAO75443 2155 aa17.07■□□□□ 0.32
USP11-207ENST00000478596 TCRBV5S4A2TA0A5A2 114 aa17.07■□□□□ 0.32
USP11-207ENST00000478596 M0R2C6 588 aa17.07■□□□□ 0.32
USP11-207ENST00000478596 RAD21O60216 631 aa17.07■□□□□ 0.32
USP11-207ENST00000478596 SLC4A3P48751 1232 aa17.07■□□□□ 0.32
USP11-207ENST00000478596 OAZ1P54368 228 aa17.07■□□□□ 0.32
USP11-207ENST00000478596 DEFB103AP81534 67 aa17.07■□□□□ 0.32
USP11-207ENST00000478596 PURAQ00577 322 aaKnown RBP17.07■□□□□ 0.32
USP11-207ENST00000478596 PTPROQ16827 1216 aa17.07■□□□□ 0.32
USP11-207ENST00000478596 TAPT1Q6NXT6 567 aa17.07■□□□□ 0.32
USP11-207ENST00000478596 TICAM2Q86XR7 235 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms