RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 ARHGEF12Q9NZN5 1544 aa5.73□□□□□ -1.49
GPNMB-210ENST00000478451 ARID4BQ4LE39 1312 aaPredicted RBP5.73□□□□□ -1.49
GPNMB-210ENST00000478451 SHANK2Q9UPX8 1470 aa5.72□□□□□ -1.49
GPNMB-210ENST00000478451 CCDC7Q96M83 1385 aa5.72□□□□□ -1.49
GPNMB-210ENST00000478451 FADS2P1A8MWK0 482 aa5.72□□□□□ -1.49
GPNMB-210ENST00000478451 HSPA5P11021 654 aaKnown RBP5.72□□□□□ -1.49
GPNMB-210ENST00000478451 ATF4P18848 351 aaPredicted RBP5.72□□□□□ -1.49
GPNMB-210ENST00000478451 PDE6BP35913 854 aa5.72□□□□□ -1.49
GPNMB-210ENST00000478451 CTSWP56202 376 aa5.72□□□□□ -1.49
GPNMB-210ENST00000478451 RTP1P59025 263 aa5.72□□□□□ -1.49
GPNMB-210ENST00000478451 SLC7A5Q01650 507 aa5.72□□□□□ -1.49
GPNMB-210ENST00000478451 ANKLE2Q86XL3 938 aa5.72□□□□□ -1.49
GPNMB-210ENST00000478451 SIRT2Q8IXJ6 389 aa5.72□□□□□ -1.49
GPNMB-210ENST00000478451 FAM169BQ8N8A8 192 aa5.72□□□□□ -1.49
GPNMB-210ENST00000478451 KLHL6Q8WZ60 621 aa5.72□□□□□ -1.49
GPNMB-210ENST00000478451 ANAPC16Q96DE5 110 aa5.72□□□□□ -1.49
GPNMB-210ENST00000478451 MPHOSPH9Q99550 1183 aa5.72□□□□□ -1.49
GPNMB-210ENST00000478451 SLC12A9Q9BXP2 914 aa5.72□□□□□ -1.49
GPNMB-210ENST00000478451 NOL6Q9H6R4 1146 aaKnown RBP5.72□□□□□ -1.49
GPNMB-210ENST00000478451 WHRNQ9P202 907 aa5.72□□□□□ -1.49
GPNMB-210ENST00000478451 SF3B6Q9Y3B4 125 aaKnown RBP5.72□□□□□ -1.49
GPNMB-210ENST00000478451 TAF6LQ9Y6J9 622 aa5.72□□□□□ -1.49
GPNMB-210ENST00000478451 E9PCH4 1651 aa5.72□□□□□ -1.49
GPNMB-210ENST00000478451 KDM5CP41229 1560 aa5.72□□□□□ -1.49
GPNMB-210ENST00000478451 DENND4BO75064 1496 aaPredicted RBP5.71□□□□□ -1.49
GPNMB-210ENST00000478451 GRIN2AQ12879 1464 aa5.71□□□□□ -1.49
GPNMB-210ENST00000478451 ROCK2O75116 1388 aaKnown RBP5.71□□□□□ -1.5
GPNMB-210ENST00000478451 DISP1Q96F81 1524 aa5.71□□□□□ -1.5
GPNMB-210ENST00000478451 KDM5DQ9BY66 1539 aa5.71□□□□□ -1.5
GPNMB-210ENST00000478451 IGSF3O75054 1194 aa5.71□□□□□ -1.5
GPNMB-210ENST00000478451 GSTM1P09488 218 aa5.71□□□□□ -1.5
GPNMB-210ENST00000478451 CASP7P55210 303 aa5.71□□□□□ -1.5
GPNMB-210ENST00000478451 KRTAP1-1Q07627 177 aa5.71□□□□□ -1.5
GPNMB-210ENST00000478451 HSF5Q4G112 596 aaPredicted RBP5.71□□□□□ -1.5
GPNMB-210ENST00000478451 ADGRF1Q5T601 910 aa5.71□□□□□ -1.5
GPNMB-210ENST00000478451 HEATR6Q6AI08 1181 aaKnown RBP5.71□□□□□ -1.5
GPNMB-210ENST00000478451 GALNT18Q6P9A2 607 aa5.71□□□□□ -1.5
GPNMB-210ENST00000478451 ZNF605Q86T29 641 aa5.71□□□□□ -1.5
GPNMB-210ENST00000478451 NAT16Q8N8M0 369 aa5.71□□□□□ -1.5
GPNMB-210ENST00000478451 ZDHHC15Q96MV8 337 aa5.71□□□□□ -1.5
GPNMB-210ENST00000478451 C8orf37Q96NL8 207 aa5.71□□□□□ -1.5
GPNMB-210ENST00000478451 SLC26A8Q96RN1 970 aa5.71□□□□□ -1.5
GPNMB-210ENST00000478451 PLCD4Q9BRC7 762 aa5.71□□□□□ -1.5
GPNMB-210ENST00000478451 KLHL25Q9H0H3 589 aa5.71□□□□□ -1.5
GPNMB-210ENST00000478451 GBP3Q9H0R5 595 aa5.71□□□□□ -1.5
GPNMB-210ENST00000478451 CRTAC1Q9NQ79 661 aa5.71□□□□□ -1.5
GPNMB-210ENST00000478451 TROQ12816 1431 aaPredicted RBP5.71□□□□□ -1.5
GPNMB-210ENST00000478451 ARHGEF5Q12774 1597 aa5.71□□□□□ -1.5
GPNMB-210ENST00000478451 ZBED9Q6R2W3 1325 aa5.71□□□□□ -1.5
GPNMB-210ENST00000478451 NUP153P49790 1475 aaKnown RBP5.71□□□□□ -1.5
GPNMB-210ENST00000478451 LAMC1P11047 1609 aa5.7□□□□□ -1.5
GPNMB-210ENST00000478451 ANKRD30BQ9BXX2 1392 aa5.7□□□□□ -1.5
GPNMB-210ENST00000478451 A0A087WZG4 1122 aa5.7□□□□□ -1.5
GPNMB-210ENST00000478451 NFIBO00712 420 aa5.7□□□□□ -1.5
GPNMB-210ENST00000478451 EPHX1P07099 455 aa5.7□□□□□ -1.5
GPNMB-210ENST00000478451 CD3EP07766 207 aa5.7□□□□□ -1.5
GPNMB-210ENST00000478451 CEBPAP49715 358 aaPredicted RBP5.7□□□□□ -1.5
GPNMB-210ENST00000478451 PPP2R5DQ14738 602 aa5.7□□□□□ -1.5
GPNMB-210ENST00000478451 SLCO6A1Q86UG4 719 aa5.7□□□□□ -1.5
GPNMB-210ENST00000478451 ADCY4Q8NFM4 1077 aa5.7□□□□□ -1.5
GPNMB-210ENST00000478451 RRP7BPQ9NSQ0 103 aa5.7□□□□□ -1.5
GPNMB-210ENST00000478451 ABCC5O15440 1437 aa5.7□□□□□ -1.5
GPNMB-210ENST00000478451 MYO5CQ9NQX4 1742 aa5.7□□□□□ -1.5
GPNMB-210ENST00000478451 WASHC2AQ641Q2 1341 aa5.7□□□□□ -1.5
GPNMB-210ENST00000478451 FANCIQ9NVI1 1328 aa5.7□□□□□ -1.5
GPNMB-210ENST00000478451 MBD5Q9P267 1494 aa5.7□□□□□ -1.5
GPNMB-210ENST00000478451 EIF2AK4Q9P2K8 1649 aaKnown RBP5.7□□□□□ -1.5
GPNMB-210ENST00000478451 KTN1Q86UP2 1357 aaKnown RBP5.69□□□□□ -1.5
GPNMB-210ENST00000478451 ANKRD30AQ9BXX3 1397 aa5.69□□□□□ -1.5
GPNMB-210ENST00000478451 KIAA1107Q9UPP5 1409 aa5.69□□□□□ -1.5
GPNMB-210ENST00000478451 A0A1W2PQ45 241 aaPredicted RBP5.69□□□□□ -1.5
GPNMB-210ENST00000478451 A0A1W2PQY0 241 aa5.69□□□□□ -1.5
GPNMB-210ENST00000478451 OR14I1A6ND48 311 aa5.69□□□□□ -1.5
GPNMB-210ENST00000478451 WTIPA6NIX2 430 aaPredicted RBP5.69□□□□□ -1.5
GPNMB-210ENST00000478451 KRT1P04264 644 aa5.69□□□□□ -1.5
GPNMB-210ENST00000478451 SSBP05455 408 aaKnown RBP eCLIP5.69□□□□□ -1.5
GPNMB-210ENST00000478451 C1QTNF9P0C862 333 aa5.69□□□□□ -1.5
GPNMB-210ENST00000478451 PNLIPP16233 465 aa5.69□□□□□ -1.5
GPNMB-210ENST00000478451 NOP2P46087 812 aaKnown RBP5.69□□□□□ -1.5
GPNMB-210ENST00000478451 POU4F1Q01851 419 aa5.69□□□□□ -1.5
GPNMB-210ENST00000478451 GNL2Q13823 731 aaKnown RBP5.69□□□□□ -1.5
GPNMB-210ENST00000478451 KIAA1211LQ6NV74 962 aa5.69□□□□□ -1.5
GPNMB-210ENST00000478451 VHLLQ6RSH7 139 aa5.69□□□□□ -1.5
GPNMB-210ENST00000478451 CYP2R1Q6VVX0 501 aa5.69□□□□□ -1.5
GPNMB-210ENST00000478451 VPS37DQ86XT2 251 aa5.69□□□□□ -1.5
GPNMB-210ENST00000478451 TMEM52Q8NDY8 209 aa5.69□□□□□ -1.5
GPNMB-210ENST00000478451 FGD4Q96M96 766 aa5.69□□□□□ -1.5
GPNMB-210ENST00000478451 HIRIP3Q9BW71 556 aaPredicted RBP5.69□□□□□ -1.5
GPNMB-210ENST00000478451 MCOLN1Q9GZU1 580 aa5.69□□□□□ -1.5
GPNMB-210ENST00000478451 ZNF552Q9H707 407 aaPredicted RBP5.69□□□□□ -1.5
GPNMB-210ENST00000478451 DIS3Q9Y2L1 958 aaKnown RBP5.69□□□□□ -1.5
GPNMB-210ENST00000478451 PREX2Q70Z35 1606 aa5.69□□□□□ -1.5
GPNMB-210ENST00000478451 SYNJ2O15056 1496 aa5.69□□□□□ -1.5
GPNMB-210ENST00000478451 CEP170Q5SW79 1584 aa5.68□□□□□ -1.5
GPNMB-210ENST00000478451 MYOCOSA0A1B0GUC4 107 aa5.68□□□□□ -1.5
GPNMB-210ENST00000478451 FGF10O15520 208 aaPredicted RBP5.68□□□□□ -1.5
GPNMB-210ENST00000478451 PEX10O60683 326 aa5.68□□□□□ -1.5
GPNMB-210ENST00000478451 PPM1BO75688 479 aa5.68□□□□□ -1.5
GPNMB-210ENST00000478451 INHBBP09529 407 aa5.68□□□□□ -1.5
GPNMB-210ENST00000478451 TMEM253P0C7T8 217 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms